RNA–Protein interactions for RNA: ENST00000463315.1

SEMA3D-203, Transcript of semaphorin 3D, humanhuman

TSL 2

Gene SEMA3D, Length 1,257 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-203ENST00000463315 DCAF8Q5TAQ9 597 aa17.09■□□□□ 0.33
SEMA3D-203ENST00000463315 CIAPIN1Q6FI81 312 aa17.09■□□□□ 0.33
SEMA3D-203ENST00000463315 SSUH2Q9Y2M2 353 aa17.09■□□□□ 0.33
SEMA3D-203ENST00000463315 ZNF609O15014 1411 aa17.08■□□□□ 0.32
SEMA3D-203ENST00000463315 YDJCA8MPS7 323 aa17.08■□□□□ 0.32
SEMA3D-203ENST00000463315 POTECB2RU33 542 aa17.08■□□□□ 0.32
SEMA3D-203ENST00000463315 ECE2O60344 883 aa17.08■□□□□ 0.32
SEMA3D-203ENST00000463315 TOMM70O94826 608 aa17.08■□□□□ 0.32
SEMA3D-203ENST00000463315 PDE8BO95263 885 aa17.08■□□□□ 0.32
SEMA3D-203ENST00000463315 PANK1Q8TE04 598 aa17.08■□□□□ 0.32
SEMA3D-203ENST00000463315 PUS3Q9BZE2 481 aaKnown RBP17.08■□□□□ 0.32
SEMA3D-203ENST00000463315 SCN4AP35499 1836 aa17.07■□□□□ 0.32
SEMA3D-203ENST00000463315 IRS2Q9Y4H2 1338 aa17.07■□□□□ 0.32
SEMA3D-203ENST00000463315 PITPNM1O00562 1244 aa17.07■□□□□ 0.32
SEMA3D-203ENST00000463315 SRGAP3O43295 1099 aa17.07■□□□□ 0.32
SEMA3D-203ENST00000463315 RPS12P25398 132 aaKnown RBP17.07■□□□□ 0.32
SEMA3D-203ENST00000463315 C16orf71Q8IYS4 520 aaPredicted RBP17.07■□□□□ 0.32
SEMA3D-203ENST00000463315 VGLL2Q8N8G2 317 aa17.07■□□□□ 0.32
SEMA3D-203ENST00000463315 DPF2Q92785 391 aa17.07■□□□□ 0.32
SEMA3D-203ENST00000463315 DBNDD1Q9H9R9 158 aa17.07■□□□□ 0.32
SEMA3D-203ENST00000463315 TAF5LO75529 589 aa17.06■□□□□ 0.32
SEMA3D-203ENST00000463315 VIL1P09327 827 aaKnown RBP17.06■□□□□ 0.32
SEMA3D-203ENST00000463315 IL15P40933 162 aaPredicted RBP17.06■□□□□ 0.32
SEMA3D-203ENST00000463315 MMP14P50281 582 aa17.06■□□□□ 0.32
SEMA3D-203ENST00000463315 DOK7Q18PE1 504 aa17.06■□□□□ 0.32
SEMA3D-203ENST00000463315 LRRC24Q50LG9 513 aa17.06■□□□□ 0.32
SEMA3D-203ENST00000463315 METTL24Q5JXM2 366 aa17.06■□□□□ 0.32
SEMA3D-203ENST00000463315 HELBQ8NG08 1087 aaPredicted RBP17.06■□□□□ 0.32
SEMA3D-203ENST00000463315 RBM46Q8TBY0 533 aaKnown RBP17.06■□□□□ 0.32
SEMA3D-203ENST00000463315 HACL1Q9UJ83 578 aa17.06■□□□□ 0.32
SEMA3D-203ENST00000463315 A0A1B0GUL6 1792 aa17.05■□□□□ 0.32
SEMA3D-203ENST00000463315 WTIPA6NIX2 430 aaPredicted RBP17.05■□□□□ 0.32
SEMA3D-203ENST00000463315 PLIN1O60240 522 aa17.05■□□□□ 0.32
SEMA3D-203ENST00000463315 RAD17O75943 681 aa17.05■□□□□ 0.32
SEMA3D-203ENST00000463315 LMOD1P29536 600 aaPredicted RBP17.05■□□□□ 0.32
SEMA3D-203ENST00000463315 ATP8B2P98198 1209 aa17.05■□□□□ 0.32
SEMA3D-203ENST00000463315 ATG9AQ7Z3C6 839 aa17.05■□□□□ 0.32
SEMA3D-203ENST00000463315 ZNF804AQ7Z570 1209 aa17.05■□□□□ 0.32
SEMA3D-203ENST00000463315 PNMA8AQ86V59 439 aaPredicted RBP17.05■□□□□ 0.32
SEMA3D-203ENST00000463315 KLHDC4Q8TBB5 520 aa17.05■□□□□ 0.32
SEMA3D-203ENST00000463315 SSH3Q8TE77 659 aa17.05■□□□□ 0.32
SEMA3D-203ENST00000463315 GPR101Q96P66 508 aaPredicted RBP17.05■□□□□ 0.32
SEMA3D-203ENST00000463315 GJA3Q9Y6H8 435 aa17.05■□□□□ 0.32
SEMA3D-203ENST00000463315 USP17L3A6NCW0 530 aa17.04■□□□□ 0.32
SEMA3D-203ENST00000463315 USP17L4A6NCW7 530 aa17.04■□□□□ 0.32
SEMA3D-203ENST00000463315 SCNN1DP51172 638 aa17.04■□□□□ 0.32
SEMA3D-203ENST00000463315 PUM3Q15397 648 aaKnown RBP17.04■□□□□ 0.32
SEMA3D-203ENST00000463315 USP17L1Q7RTZ2 530 aa17.04■□□□□ 0.32
SEMA3D-203ENST00000463315 TXNRD3Q86VQ6 643 aa17.04■□□□□ 0.32
SEMA3D-203ENST00000463315 TAF1DQ9H5J8 278 aaPredicted RBP17.04■□□□□ 0.32
SEMA3D-203ENST00000463315 ZBTB40Q9NUA8 1239 aa17.04■□□□□ 0.32
SEMA3D-203ENST00000463315 GPRC5DQ9NZD1 345 aa17.04■□□□□ 0.32
SEMA3D-203ENST00000463315 CEP126Q9P2H0 1117 aa17.04■□□□□ 0.32
SEMA3D-203ENST00000463315 PSMD14O00487 310 aa17.03■□□□□ 0.32
SEMA3D-203ENST00000463315 IL1R1P14778 569 aa17.03■□□□□ 0.32
SEMA3D-203ENST00000463315 FSTL1Q12841 308 aa17.03■□□□□ 0.32
SEMA3D-203ENST00000463315 STRIP1Q5VSL9 837 aa17.03■□□□□ 0.32
SEMA3D-203ENST00000463315 AGBL3Q8NEM8 1001 aa17.03■□□□□ 0.32
SEMA3D-203ENST00000463315 CD209Q9NNX6 404 aa17.03■□□□□ 0.32
SEMA3D-203ENST00000463315 COG6Q9Y2V7 657 aa17.03■□□□□ 0.32
SEMA3D-203ENST00000463315 MYO3BQ8WXR4 1341 aa17.02■□□□□ 0.32
SEMA3D-203ENST00000463315 PNMA6EA0A0J9YXQ4 647 aa17.02■□□□□ 0.32
SEMA3D-203ENST00000463315 FGFR2P21802 821 aa17.02■□□□□ 0.32
SEMA3D-203ENST00000463315 EPHX2P34913 555 aa17.02■□□□□ 0.32
SEMA3D-203ENST00000463315 C1QTNF8P60827 252 aa17.02■□□□□ 0.32
SEMA3D-203ENST00000463315 USP50Q70EL3 339 aaPredicted RBP17.02■□□□□ 0.32
SEMA3D-203ENST00000463315 RPAP2Q8IXW5 612 aaPredicted RBP17.02■□□□□ 0.32
SEMA3D-203ENST00000463315 LPIN2Q92539 896 aa17.02■□□□□ 0.32
SEMA3D-203ENST00000463315 SNAP23O00161 211 aa17.01■□□□□ 0.31
SEMA3D-203ENST00000463315 IFIT1P09914 478 aaKnown RBP17.01■□□□□ 0.31
SEMA3D-203ENST00000463315 GMPSP49915 693 aaPredicted RBP17.01■□□□□ 0.31
SEMA3D-203ENST00000463315 RRP1P56182 461 aaKnown RBP17.01■□□□□ 0.31
SEMA3D-203ENST00000463315 FKBP1AP62942 108 aaKnown RBP17.01■□□□□ 0.31
SEMA3D-203ENST00000463315 CAVIN4Q5BKX8 364 aa17.01■□□□□ 0.31
SEMA3D-203ENST00000463315 RSBN1LQ6PCB5 846 aaPredicted RBP17.01■□□□□ 0.31
SEMA3D-203ENST00000463315 SMC1BQ8NDV3 1235 aa17.01■□□□□ 0.31
SEMA3D-203ENST00000463315 SIL1Q9H173 461 aa17.01■□□□□ 0.31
SEMA3D-203ENST00000463315 ADARB2Q9NS39 739 aaKnown RBP17.01■□□□□ 0.31
SEMA3D-203ENST00000463315 PSME4Q14997 1843 aa17■□□□□ 0.31
SEMA3D-203ENST00000463315 SASH1O94885 1247 aa17■□□□□ 0.31
SEMA3D-203ENST00000463315 KLRK1P26718 216 aa17■□□□□ 0.31
SEMA3D-203ENST00000463315 HIBADHP31937 336 aaKnown RBP17■□□□□ 0.31
SEMA3D-203ENST00000463315 CEP85Q6P2H3 762 aa17■□□□□ 0.31
SEMA3D-203ENST00000463315 FBXO33Q7Z6M2 555 aa17■□□□□ 0.31
SEMA3D-203ENST00000463315 LDHDQ86WU2 507 aa17■□□□□ 0.31
SEMA3D-203ENST00000463315 FAM84BQ96KN1 310 aaPredicted RBP17■□□□□ 0.31
SEMA3D-203ENST00000463315 KCNQ5Q9NR82 932 aa17■□□□□ 0.31
SEMA3D-203ENST00000463315 PA2G4Q9UQ80 394 aaKnown RBP17■□□□□ 0.31
SEMA3D-203ENST00000463315 AKAP2Q9Y2D5 859 aa17■□□□□ 0.31
SEMA3D-203ENST00000463315 NOP58Q9Y2X3 529 aaKnown RBP17■□□□□ 0.31
SEMA3D-203ENST00000463315 H7C1D1 291 aa16.99■□□□□ 0.31
SEMA3D-203ENST00000463315 SLC5A1P13866 664 aa16.99■□□□□ 0.31
SEMA3D-203ENST00000463315 EPS15P42566 896 aa16.99■□□□□ 0.31
SEMA3D-203ENST00000463315 G3BP1Q13283 466 aaKnown RBP eCLIP16.99■□□□□ 0.31
SEMA3D-203ENST00000463315 DACT2Q5SW24 774 aa16.99■□□□□ 0.31
SEMA3D-203ENST00000463315 C20orf194Q5TEA3 1177 aa16.99■□□□□ 0.31
SEMA3D-203ENST00000463315 TTLL5Q6EMB2 1281 aa16.99■□□□□ 0.31
SEMA3D-203ENST00000463315 TDRD7Q8NHU6 1098 aaKnown RBP16.99■□□□□ 0.31
SEMA3D-203ENST00000463315 GMLQ99445 158 aa16.99■□□□□ 0.31
SEMA3D-203ENST00000463315 CNOT7Q9UIV1 285 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms