RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 WTIPA6NIX2 430 aaPredicted RBP10.22□□□□□ -0.77
CDC42BPA-210ENST00000462553 MLLT1Q03111 559 aaPredicted RBP10.22□□□□□ -0.77
CDC42BPA-210ENST00000462553 DGKZQ13574 1117 aa10.22□□□□□ -0.77
CDC42BPA-210ENST00000462553 RBM26Q5T8P6 1007 aaKnown RBP10.22□□□□□ -0.77
CDC42BPA-210ENST00000462553 FAM9BQ8IZU0 186 aa10.22□□□□□ -0.77
CDC42BPA-210ENST00000462553 C8orf58Q8NAV2 365 aa10.22□□□□□ -0.77
CDC42BPA-210ENST00000462553 CCDC191Q8NCU4 936 aa10.22□□□□□ -0.77
CDC42BPA-210ENST00000462553 JARID2Q92833 1246 aaPredicted RBP10.22□□□□□ -0.77
CDC42BPA-210ENST00000462553 DCPSQ96C86 337 aaKnown RBP10.22□□□□□ -0.77
CDC42BPA-210ENST00000462553 CDCA5Q96FF9 252 aa10.22□□□□□ -0.77
CDC42BPA-210ENST00000462553 SAGE1Q9NXZ1 904 aa10.22□□□□□ -0.77
CDC42BPA-210ENST00000462553 GGA1Q9UJY5 639 aa10.22□□□□□ -0.77
CDC42BPA-210ENST00000462553 ELL2O00472 640 aaPredicted RBP10.21□□□□□ -0.77
CDC42BPA-210ENST00000462553 PDE8AO60658 829 aa10.21□□□□□ -0.77
CDC42BPA-210ENST00000462553 GNAI1P63096 354 aa10.21□□□□□ -0.77
CDC42BPA-210ENST00000462553 KIF23Q02241 960 aaPredicted RBP10.21□□□□□ -0.77
CDC42BPA-210ENST00000462553 CCDC152Q4G0S7 254 aa10.21□□□□□ -0.77
CDC42BPA-210ENST00000462553 RSBN1LQ6PCB5 846 aaPredicted RBP10.21□□□□□ -0.77
CDC42BPA-210ENST00000462553 AGBL3Q8NEM8 1001 aa10.21□□□□□ -0.77
CDC42BPA-210ENST00000462553 CCDC85AQ96PX6 553 aaPredicted RBP10.21□□□□□ -0.77
CDC42BPA-210ENST00000462553 METTL22Q9BUU2 404 aaPredicted RBP10.21□□□□□ -0.77
CDC42BPA-210ENST00000462553 ZC3H12CQ9C0D7 883 aaKnown RBP10.21□□□□□ -0.77
CDC42BPA-210ENST00000462553 CWC25Q9NXE8 425 aaPredicted RBP10.21□□□□□ -0.77
CDC42BPA-210ENST00000462553 ANKIB1Q9P2G1 1089 aa10.21□□□□□ -0.77
CDC42BPA-210ENST00000462553 XDHP47989 1333 aa10.21□□□□□ -0.78
CDC42BPA-210ENST00000462553 IL16Q14005 1332 aa10.21□□□□□ -0.78
CDC42BPA-210ENST00000462553 MED23Q9ULK4 1368 aa10.21□□□□□ -0.78
CDC42BPA-210ENST00000462553 IGKV5-2P06315 115 aa10.2□□□□□ -0.78
CDC42BPA-210ENST00000462553 ZNF157P51786 506 aaPredicted RBP10.2□□□□□ -0.78
CDC42BPA-210ENST00000462553 CALD1Q05682 793 aaKnown RBP10.2□□□□□ -0.78
CDC42BPA-210ENST00000462553 ANGEL2Q5VTE6 544 aaKnown RBP10.2□□□□□ -0.78
CDC42BPA-210ENST00000462553 RASAL3Q86YV0 1011 aa10.2□□□□□ -0.78
CDC42BPA-210ENST00000462553 SULF1Q8IWU6 871 aa10.2□□□□□ -0.78
CDC42BPA-210ENST00000462553 TSPYL6Q8N831 410 aa10.2□□□□□ -0.78
CDC42BPA-210ENST00000462553 C2orf69Q8N8R5 385 aa10.2□□□□□ -0.78
CDC42BPA-210ENST00000462553 ARAP2Q8WZ64 1704 aa10.2□□□□□ -0.78
CDC42BPA-210ENST00000462553 TSR2Q969E8 191 aaKnown RBP10.2□□□□□ -0.78
CDC42BPA-210ENST00000462553 ZNF521Q96K83 1311 aa10.2□□□□□ -0.78
CDC42BPA-210ENST00000462553 PITPNM2Q9BZ72 1349 aa10.2□□□□□ -0.78
CDC42BPA-210ENST00000462553 OTOFQ9HC10 1997 aa10.2□□□□□ -0.78
CDC42BPA-210ENST00000462553 RNF186Q9NXI6 227 aa10.2□□□□□ -0.78
CDC42BPA-210ENST00000462553 CCER2I3L3R5 266 aa10.19□□□□□ -0.78
CDC42BPA-210ENST00000462553 CTSWP56202 376 aa10.19□□□□□ -0.78
CDC42BPA-210ENST00000462553 SCARF1Q14162 830 aa10.19□□□□□ -0.78
CDC42BPA-210ENST00000462553 CCDC102AQ96A19 550 aa10.19□□□□□ -0.78
CDC42BPA-210ENST00000462553 CSRNP1Q96S65 589 aa10.19□□□□□ -0.78
CDC42BPA-210ENST00000462553 MYOZ2Q9NPC6 264 aa10.19□□□□□ -0.78
CDC42BPA-210ENST00000462553 SCAF8Q9UPN6 1271 aaKnown RBP10.19□□□□□ -0.78
CDC42BPA-210ENST00000462553 MAP3K2Q9Y2U5 619 aa10.19□□□□□ -0.78
CDC42BPA-210ENST00000462553 FANCIQ9NVI1 1328 aa10.18□□□□□ -0.78
CDC42BPA-210ENST00000462553 TRPA1O75762 1119 aa10.18□□□□□ -0.78
CDC42BPA-210ENST00000462553 HSP90B1P14625 803 aaKnown RBP10.18□□□□□ -0.78
CDC42BPA-210ENST00000462553 ATP2B4P23634 1241 aa10.18□□□□□ -0.78
CDC42BPA-210ENST00000462553 MOB2Q70IA6 237 aa10.18□□□□□ -0.78
CDC42BPA-210ENST00000462553 ANKRD18AQ8IVF6 992 aa10.18□□□□□ -0.78
CDC42BPA-210ENST00000462553 TTLL11Q8NHH1 800 aa10.18□□□□□ -0.78
CDC42BPA-210ENST00000462553 GREM2Q9H772 168 aa10.18□□□□□ -0.78
CDC42BPA-210ENST00000462553 SALL2Q9Y467 1007 aaPredicted RBP10.18□□□□□ -0.78
CDC42BPA-210ENST00000462553 PI4KAP2A4QPH2 592 aa10.17□□□□□ -0.78
CDC42BPA-210ENST00000462553 USP17L3A6NCW0 530 aa10.17□□□□□ -0.78
CDC42BPA-210ENST00000462553 USP17L4A6NCW7 530 aa10.17□□□□□ -0.78
CDC42BPA-210ENST00000462553 USP17L8P0C7I0 530 aa10.17□□□□□ -0.78
CDC42BPA-210ENST00000462553 CD44P16070 742 aaKnown RBP10.17□□□□□ -0.78
CDC42BPA-210ENST00000462553 DACT2Q5SW24 774 aa10.17□□□□□ -0.78
CDC42BPA-210ENST00000462553 CCDC30Q5VVM6 783 aa10.17□□□□□ -0.78
CDC42BPA-210ENST00000462553 USP17L1Q7RTZ2 530 aa10.17□□□□□ -0.78
CDC42BPA-210ENST00000462553 PODNQ7Z5L7 613 aa10.17□□□□□ -0.78
CDC42BPA-210ENST00000462553 WDR63Q8IWG1 891 aa10.17□□□□□ -0.78
CDC42BPA-210ENST00000462553 PI4KAP1Q8N8J0 262 aa10.17□□□□□ -0.78
CDC42BPA-210ENST00000462553 MXD3Q9BW11 206 aa10.17□□□□□ -0.78
CDC42BPA-210ENST00000462553 MINPP1Q9UNW1 487 aa10.17□□□□□ -0.78
CDC42BPA-210ENST00000462553 RBBP6Q7Z6E9 1792 aaKnown RBP10.16□□□□□ -0.78
CDC42BPA-210ENST00000462553 NEURL1BA8MQ27 555 aa10.16□□□□□ -0.78
CDC42BPA-210ENST00000462553 G3V3G9 751 aa10.16□□□□□ -0.78
CDC42BPA-210ENST00000462553 DDX58O95786 925 aaKnown RBP10.16□□□□□ -0.78
CDC42BPA-210ENST00000462553 KLRK1P26718 216 aa10.16□□□□□ -0.78
CDC42BPA-210ENST00000462553 FKBP1BP68106 108 aa10.16□□□□□ -0.78
CDC42BPA-210ENST00000462553 CWF19L2Q2TBE0 894 aaKnown RBP10.16□□□□□ -0.78
CDC42BPA-210ENST00000462553 NBPF9Q3BBW0 867 aa10.16□□□□□ -0.78
CDC42BPA-210ENST00000462553 DCAF8Q5TAQ9 597 aa10.16□□□□□ -0.78
CDC42BPA-210ENST00000462553 DIEXFQ68CQ4 756 aaKnown RBP10.16□□□□□ -0.78
CDC42BPA-210ENST00000462553 KSR2Q6VAB6 950 aa10.16□□□□□ -0.78
CDC42BPA-210ENST00000462553 G2E3Q7L622 706 aa10.16□□□□□ -0.78
CDC42BPA-210ENST00000462553 TXNRD3Q86VQ6 643 aa10.16□□□□□ -0.78
CDC42BPA-210ENST00000462553 CDC5LQ99459 802 aaKnown RBP10.16□□□□□ -0.78
CDC42BPA-210ENST00000462553 BSDC1Q9NW68 430 aaPredicted RBP10.16□□□□□ -0.78
CDC42BPA-210ENST00000462553 SSC5DA1L4H1 1573 aa10.16□□□□□ -0.78
CDC42BPA-210ENST00000462553 KIAA0100Q14667 2235 aaKnown RBP10.15□□□□□ -0.78
CDC42BPA-210ENST00000462553 IRS2Q9Y4H2 1338 aa10.15□□□□□ -0.78
CDC42BPA-210ENST00000462553 CCT4P50991 539 aaKnown RBP10.15□□□□□ -0.78
CDC42BPA-210ENST00000462553 CASP7P55210 303 aa10.15□□□□□ -0.78
CDC42BPA-210ENST00000462553 SOX10P56693 466 aa10.15□□□□□ -0.78
CDC42BPA-210ENST00000462553 PRAMEF18Q5VWM3 479 aa10.15□□□□□ -0.78
CDC42BPA-210ENST00000462553 MIER1Q8N108 512 aa10.15□□□□□ -0.78
CDC42BPA-210ENST00000462553 MYO3BQ8WXR4 1341 aa10.14□□□□□ -0.79
CDC42BPA-210ENST00000462553 UBE2Q2LH0YL09 131 aa10.14□□□□□ -0.79
CDC42BPA-210ENST00000462553 H7C1W4 665 aa10.14□□□□□ -0.79
CDC42BPA-210ENST00000462553 WNT10BO00744 389 aa10.14□□□□□ -0.79
CDC42BPA-210ENST00000462553 SASH1O94885 1247 aa10.14□□□□□ -0.79
CDC42BPA-210ENST00000462553 STRIP1Q5VSL9 837 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms