RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 MOB2Q70IA6 237 aa18.76■□□□□ 0.59
NCK1-202ENST00000460960 MYOZ2Q9NPC6 264 aa18.76■□□□□ 0.59
NCK1-202ENST00000460960 TNRC18O15417 2968 aaPredicted RBP18.76■□□□□ 0.59
NCK1-202ENST00000460960 ANKRD18AQ8IVF6 992 aa18.75■□□□□ 0.59
NCK1-202ENST00000460960 REM2Q8IYK8 340 aaPredicted RBP18.75■□□□□ 0.59
NCK1-202ENST00000460960 PHAXQ9H814 394 aaKnown RBP18.75■□□□□ 0.59
NCK1-202ENST00000460960 PCDH10Q9P2E7 1040 aa18.75■□□□□ 0.59
NCK1-202ENST00000460960 XDHP47989 1333 aa18.74■□□□□ 0.59
NCK1-202ENST00000460960 PSME4Q14997 1843 aa18.74■□□□□ 0.59
NCK1-202ENST00000460960 USP17L3A6NCW0 530 aa18.74■□□□□ 0.59
NCK1-202ENST00000460960 USP17L4A6NCW7 530 aa18.74■□□□□ 0.59
NCK1-202ENST00000460960 UBE2Q2LH0YL09 131 aa18.74■□□□□ 0.59
NCK1-202ENST00000460960 PDE8AO60658 829 aa18.74■□□□□ 0.59
NCK1-202ENST00000460960 PRAMEF18Q5VWM3 479 aa18.74■□□□□ 0.59
NCK1-202ENST00000460960 G2E3Q7L622 706 aa18.74■□□□□ 0.59
NCK1-202ENST00000460960 USP17L1Q7RTZ2 530 aa18.74■□□□□ 0.59
NCK1-202ENST00000460960 YTHDC1Q96MU7 727 aaKnown RBP18.74■□□□□ 0.59
NCK1-202ENST00000460960 TBC1D8O95759 1140 aa18.73■□□□□ 0.59
NCK1-202ENST00000460960 FKBP1BP68106 108 aa18.73■□□□□ 0.59
NCK1-202ENST00000460960 MKRN3Q13064 507 aaKnown RBP18.73■□□□□ 0.59
NCK1-202ENST00000460960 CCDC30Q5VVM6 783 aa18.73■□□□□ 0.59
NCK1-202ENST00000460960 CWC25Q9NXE8 425 aaPredicted RBP18.73■□□□□ 0.59
NCK1-202ENST00000460960 HPS5Q9UPZ3 1129 aa18.73■□□□□ 0.59
NCK1-202ENST00000460960 PCCAP05165 728 aaPredicted RBP18.72■□□□□ 0.59
NCK1-202ENST00000460960 ATP2B4P23634 1241 aa18.72■□□□□ 0.59
NCK1-202ENST00000460960 CCDC191Q8NCU4 936 aa18.72■□□□□ 0.59
NCK1-202ENST00000460960 SPEF2Q9C093 1822 aa18.72■□□□□ 0.59
NCK1-202ENST00000460960 PITPNM2Q9BZ72 1349 aa18.72■□□□□ 0.59
NCK1-202ENST00000460960 CACNA1FO60840 1977 aa18.7■□□□□ 0.58
NCK1-202ENST00000460960 ZNF609O15014 1411 aa18.7■□□□□ 0.58
NCK1-202ENST00000460960 NF2P35240 595 aa18.7■□□□□ 0.58
NCK1-202ENST00000460960 NBPF9Q3BBW0 867 aa18.7■□□□□ 0.58
NCK1-202ENST00000460960 PODNQ7Z5L7 613 aa18.7■□□□□ 0.58
NCK1-202ENST00000460960 ZNF296Q8WUU4 475 aaPredicted RBP18.7■□□□□ 0.58
NCK1-202ENST00000460960 GMLQ99445 158 aa18.7■□□□□ 0.58
NCK1-202ENST00000460960 CDC5LQ99459 802 aaKnown RBP18.7■□□□□ 0.58
NCK1-202ENST00000460960 MXD3Q9BW11 206 aa18.7■□□□□ 0.58
NCK1-202ENST00000460960 DDX58O95786 925 aaKnown RBP18.69■□□□□ 0.58
NCK1-202ENST00000460960 SLC4A2P04920 1241 aa18.69■□□□□ 0.58
NCK1-202ENST00000460960 PRKG1Q13976 671 aa18.69■□□□□ 0.58
NCK1-202ENST00000460960 OGFOD1Q8N543 542 aa18.69■□□□□ 0.58
NCK1-202ENST00000460960 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.69■□□□□ 0.58
NCK1-202ENST00000460960 WTIPA6NIX2 430 aaPredicted RBP18.68■□□□□ 0.58
NCK1-202ENST00000460960 PKN2Q16513 984 aaKnown RBP18.68■□□□□ 0.58
NCK1-202ENST00000460960 PRPF38BQ5VTL8 546 aaKnown RBP18.68■□□□□ 0.58
NCK1-202ENST00000460960 METTL22Q9BUU2 404 aaPredicted RBP18.68■□□□□ 0.58
NCK1-202ENST00000460960 SASH1O94885 1247 aa18.67■□□□□ 0.58
NCK1-202ENST00000460960 CTSWP56202 376 aa18.67■□□□□ 0.58
NCK1-202ENST00000460960 SSH1Q8WYL5 1049 aa18.67■□□□□ 0.58
NCK1-202ENST00000460960 STK31Q9BXU1 1019 aa18.67■□□□□ 0.58
NCK1-202ENST00000460960 MAP3K2Q9Y2U5 619 aa18.66■□□□□ 0.58
NCK1-202ENST00000460960 MED23Q9ULK4 1368 aa18.66■□□□□ 0.58
NCK1-202ENST00000460960 MYH3P11055 1940 aa18.65■□□□□ 0.58
NCK1-202ENST00000460960 GPR25O00155 361 aa18.65■□□□□ 0.58
NCK1-202ENST00000460960 WNT10BO00744 389 aa18.65■□□□□ 0.58
NCK1-202ENST00000460960 DACT2Q5SW24 774 aa18.65■□□□□ 0.58
NCK1-202ENST00000460960 MRPL50Q8N5N7 158 aaKnown RBP18.65■□□□□ 0.58
NCK1-202ENST00000460960 GREM2Q9H772 168 aa18.65■□□□□ 0.58
NCK1-202ENST00000460960 MINPP1Q9UNW1 487 aa18.65■□□□□ 0.58
NCK1-202ENST00000460960 CCT4P50991 539 aaKnown RBP18.64■□□□□ 0.57
NCK1-202ENST00000460960 SREBF2Q12772 1141 aa18.64■□□□□ 0.57
NCK1-202ENST00000460960 FLIIQ13045 1269 aa18.64■□□□□ 0.57
NCK1-202ENST00000460960 ARMC9Q7Z3E5 817 aa18.64■□□□□ 0.57
NCK1-202ENST00000460960 MYO3BQ8WXR4 1341 aa18.64■□□□□ 0.57
NCK1-202ENST00000460960 TM4SF4P48230 202 aa18.63■□□□□ 0.57
NCK1-202ENST00000460960 PTPN12Q05209 780 aaKnown RBP18.63■□□□□ 0.57
NCK1-202ENST00000460960 NEXNQ0ZGT2 675 aa18.63■□□□□ 0.57
NCK1-202ENST00000460960 BSDC1Q9NW68 430 aaPredicted RBP18.63■□□□□ 0.57
NCK1-202ENST00000460960 FKTNO75072 461 aa18.62■□□□□ 0.57
NCK1-202ENST00000460960 IGHMBP2P38935 993 aaKnown RBP18.62■□□□□ 0.57
NCK1-202ENST00000460960 STRIP1Q5VSL9 837 aa18.62■□□□□ 0.57
NCK1-202ENST00000460960 FBXO46Q6PJ61 603 aaPredicted RBP18.62■□□□□ 0.57
NCK1-202ENST00000460960 APOBEC3FQ8IUX4 373 aaKnown RBP18.62■□□□□ 0.57
NCK1-202ENST00000460960 KIAA0825Q8IV33 1275 aa18.62■□□□□ 0.57
NCK1-202ENST00000460960 TTLL11Q8NHH1 800 aa18.62■□□□□ 0.57
NCK1-202ENST00000460960 COA1Q9GZY4 146 aa18.62■□□□□ 0.57
NCK1-202ENST00000460960 ANGEL1Q9UNK9 670 aaKnown RBP18.62■□□□□ 0.57
NCK1-202ENST00000460960 PI4KAP2A4QPH2 592 aa18.61■□□□□ 0.57
NCK1-202ENST00000460960 F6X3S4 739 aa18.61■□□□□ 0.57
NCK1-202ENST00000460960 RARSP54136 660 aaKnown RBP18.61■□□□□ 0.57
NCK1-202ENST00000460960 TTLL5Q6EMB2 1281 aa18.61■□□□□ 0.57
NCK1-202ENST00000460960 TXNRD3Q86VQ6 643 aa18.61■□□□□ 0.57
NCK1-202ENST00000460960 PI4KAP1Q8N8J0 262 aa18.61■□□□□ 0.57
NCK1-202ENST00000460960 IGKV5-2P06315 115 aa18.6■□□□□ 0.57
NCK1-202ENST00000460960 KCNJ4P48050 445 aa18.6■□□□□ 0.57
NCK1-202ENST00000460960 CWF19L2Q2TBE0 894 aaKnown RBP18.6■□□□□ 0.57
NCK1-202ENST00000460960 KSR2Q6VAB6 950 aa18.6■□□□□ 0.57
NCK1-202ENST00000460960 UBE3BQ7Z3V4 1068 aa18.6■□□□□ 0.57
NCK1-202ENST00000460960 CHMP4AQ9BY43 222 aa18.6■□□□□ 0.57
NCK1-202ENST00000460960 R3HDMLQ9H3Y0 253 aa18.6■□□□□ 0.57
NCK1-202ENST00000460960 FZD1Q9UP38 647 aa18.6■□□□□ 0.57
NCK1-202ENST00000460960 ZNF646O15015 1829 aaPredicted RBP18.6■□□□□ 0.57
NCK1-202ENST00000460960 BCAR3O75815 825 aa18.59■□□□□ 0.57
NCK1-202ENST00000460960 KLRK1P26718 216 aa18.59■□□□□ 0.57
NCK1-202ENST00000460960 GTF2IP78347 998 aa18.59■□□□□ 0.57
NCK1-202ENST00000460960 FKBP5Q13451 457 aaPredicted RBP18.59■□□□□ 0.57
NCK1-202ENST00000460960 SMC4Q9NTJ3 1288 aa18.59■□□□□ 0.57
NCK1-202ENST00000460960 LEMD3Q9Y2U8 911 aa18.59■□□□□ 0.57
NCK1-202ENST00000460960 ZNF804BA4D1E1 1349 aa18.58■□□□□ 0.57
NCK1-202ENST00000460960 CT47B1P0C2W7 299 aaPredicted RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms