RNA–Protein interactions for RNA: ENST00000460781.1

CCDC93-204, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-204ENST00000460781 PARP2Q9UGN5 583 aa5.44□□□□□ -1.54
CCDC93-204ENST00000460781 RBM47A0AV96 593 aaKnown RBP5.43□□□□□ -1.54
CCDC93-204ENST00000460781 EIF4EBP3O60516 100 aaPredicted RBP5.43□□□□□ -1.54
CCDC93-204ENST00000460781 KIF4AO95239 1232 aa5.43□□□□□ -1.54
CCDC93-204ENST00000460781 XRCC5P13010 732 aaKnown RBP5.43□□□□□ -1.54
CCDC93-204ENST00000460781 HOXD8P13378 290 aaPredicted RBP5.43□□□□□ -1.54
CCDC93-204ENST00000460781 ZNF16P17020 682 aaPredicted RBP5.43□□□□□ -1.54
CCDC93-204ENST00000460781 GSTT1P30711 240 aa5.43□□□□□ -1.54
CCDC93-204ENST00000460781 USPL1Q5W0Q7 1092 aa5.43□□□□□ -1.54
CCDC93-204ENST00000460781 NPM2Q86SE8 214 aaKnown RBP5.43□□□□□ -1.54
CCDC93-204ENST00000460781 FCHSD1Q86WN1 690 aa5.43□□□□□ -1.54
CCDC93-204ENST00000460781 WFDC8Q8IUA0 241 aa5.43□□□□□ -1.54
CCDC93-204ENST00000460781 EPS8L3Q8TE67 593 aaKnown RBP5.43□□□□□ -1.54
CCDC93-204ENST00000460781 PBX4Q9BYU1 374 aa5.43□□□□□ -1.54
CCDC93-204ENST00000460781 MUC3BQ9H195 1237 aa5.43□□□□□ -1.54
CCDC93-204ENST00000460781 LRRC4BQ9NT99 713 aa5.43□□□□□ -1.54
CCDC93-204ENST00000460781 FAM8A1Q9UBU6 413 aa5.43□□□□□ -1.54
CCDC93-204ENST00000460781 SALL4Q9UJQ4 1053 aa5.43□□□□□ -1.54
CCDC93-204ENST00000460781 WWC3Q9ULE0 1092 aa5.43□□□□□ -1.54
CCDC93-204ENST00000460781 ZCCHC6Q5VYS8 1495 aaKnown RBP5.43□□□□□ -1.54
CCDC93-204ENST00000460781 DCAF1Q9Y4B6 1507 aa5.43□□□□□ -1.54
CCDC93-204ENST00000460781 M0R082 166 aa5.42□□□□□ -1.54
CCDC93-204ENST00000460781 CELA2BP08218 269 aaPredicted RBP5.42□□□□□ -1.54
CCDC93-204ENST00000460781 KIAA0319Q5VV43 1072 aa5.42□□□□□ -1.54
CCDC93-204ENST00000460781 ZNF417Q8TAU3 575 aa5.42□□□□□ -1.54
CCDC93-204ENST00000460781 ZNF587Q96SQ5 575 aaPredicted RBP5.42□□□□□ -1.54
CCDC93-204ENST00000460781 ZKSCAN3Q9BRR0 538 aa5.42□□□□□ -1.54
CCDC93-204ENST00000460781 BCO2Q9BYV7 579 aa5.42□□□□□ -1.54
CCDC93-204ENST00000460781 LACRTQ9GZZ8 138 aa5.42□□□□□ -1.54
CCDC93-204ENST00000460781 RASSF4Q9H2L5 321 aa5.42□□□□□ -1.54
CCDC93-204ENST00000460781 C12orf49Q9H741 205 aa5.42□□□□□ -1.54
CCDC93-204ENST00000460781 TTF2Q9UNY4 1162 aaKnown RBP5.42□□□□□ -1.54
CCDC93-204ENST00000460781 AKAP2Q9Y2D5 859 aa5.42□□□□□ -1.54
CCDC93-204ENST00000460781 SCRIBQ14160 1630 aa5.41□□□□□ -1.54
CCDC93-204ENST00000460781 A0A1W2PP55 124 aa5.41□□□□□ -1.54
CCDC93-204ENST00000460781 SLURP2P0DP57 97 aa5.41□□□□□ -1.54
CCDC93-204ENST00000460781 CDC27P30260 824 aa5.41□□□□□ -1.54
CCDC93-204ENST00000460781 IRS1P35568 1242 aa5.41□□□□□ -1.54
CCDC93-204ENST00000460781 FCGRTP55899 365 aa5.41□□□□□ -1.54
CCDC93-204ENST00000460781 RAC1P63000 192 aa5.41□□□□□ -1.54
CCDC93-204ENST00000460781 ATP11AP98196 1134 aa5.41□□□□□ -1.54
CCDC93-204ENST00000460781 PERM1Q5SV97 790 aa5.41□□□□□ -1.54
CCDC93-204ENST00000460781 FBXO33Q7Z6M2 555 aa5.41□□□□□ -1.54
CCDC93-204ENST00000460781 TMEM102Q8N9M5 508 aaPredicted RBP5.41□□□□□ -1.54
CCDC93-204ENST00000460781 MRRFQ96E11 262 aaKnown RBP5.41□□□□□ -1.54
CCDC93-204ENST00000460781 GPN3Q9UHW5 284 aaPredicted RBP5.41□□□□□ -1.54
CCDC93-204ENST00000460781 SAMM50Q9Y512 469 aa5.41□□□□□ -1.54
CCDC93-204ENST00000460781 KRT76Q01546 638 aa5.4□□□□□ -1.54
CCDC93-204ENST00000460781 PPP2R3AQ06190 1150 aa5.4□□□□□ -1.54
CCDC93-204ENST00000460781 TSNAXIP1Q2TAA8 658 aa5.4□□□□□ -1.54
CCDC93-204ENST00000460781 PRRT3Q5FWE3 981 aa5.4□□□□□ -1.54
CCDC93-204ENST00000460781 TRAPPC3LQ5T215 181 aa5.4□□□□□ -1.54
CCDC93-204ENST00000460781 COL13A1Q5TAT6 717 aaPredicted RBP5.4□□□□□ -1.54
CCDC93-204ENST00000460781 NXPE4Q6UWF7 544 aa5.4□□□□□ -1.54
CCDC93-204ENST00000460781 LYPD4Q6UWN0 246 aa5.4□□□□□ -1.54
CCDC93-204ENST00000460781 TMC4Q7Z404 712 aa5.4□□□□□ -1.54
CCDC93-204ENST00000460781 IL22RA1Q8N6P7 574 aa5.4□□□□□ -1.54
CCDC93-204ENST00000460781 CEP120Q8N960 986 aa5.4□□□□□ -1.54
CCDC93-204ENST00000460781 ZSCAN1Q8NBB4 408 aa5.4□□□□□ -1.54
CCDC93-204ENST00000460781 BSNDQ8WZ55 320 aa5.4□□□□□ -1.54
CCDC93-204ENST00000460781 BTBD6Q96KE9 485 aa5.4□□□□□ -1.54
CCDC93-204ENST00000460781 CEP44Q9C0F1 390 aa5.4□□□□□ -1.54
CCDC93-204ENST00000460781 LATS2Q9NRM7 1088 aa5.4□□□□□ -1.54
CCDC93-204ENST00000460781 DZANK1Q9NVP4 752 aa5.4□□□□□ -1.54
CCDC93-204ENST00000460781 NOP53Q9NZM5 478 aaKnown RBP5.4□□□□□ -1.54
CCDC93-204ENST00000460781 MKL2Q9ULH7 1088 aa5.4□□□□□ -1.54
CCDC93-204ENST00000460781 AK5Q9Y6K8 562 aa5.4□□□□□ -1.54
CCDC93-204ENST00000460781 ZBTB42B2RXF5 422 aa5.39□□□□□ -1.55
CCDC93-204ENST00000460781 IGHA2P01877 340 aa5.39□□□□□ -1.55
CCDC93-204ENST00000460781 USP17L7P0C7H9 530 aa5.39□□□□□ -1.55
CCDC93-204ENST00000460781 CDC25BP30305 580 aa5.39□□□□□ -1.55
CCDC93-204ENST00000460781 DAB2P98082 770 aa5.39□□□□□ -1.55
CCDC93-204ENST00000460781 IKBKEQ14164 716 aa5.39□□□□□ -1.55
CCDC93-204ENST00000460781 GRM2Q14416 872 aa5.39□□□□□ -1.55
CCDC93-204ENST00000460781 PI16Q6UXB8 463 aa5.39□□□□□ -1.55
CCDC93-204ENST00000460781 SETDB2Q96T68 719 aa5.39□□□□□ -1.55
CCDC93-204ENST00000460781 LPIN3Q9BQK8 851 aa5.39□□□□□ -1.55
CCDC93-204ENST00000460781 KLF15Q9UIH9 416 aa5.39□□□□□ -1.55
CCDC93-204ENST00000460781 PPME1Q9Y570 386 aa5.39□□□□□ -1.55
CCDC93-204ENST00000460781 A0A096LPE4 126 aa5.38□□□□□ -1.55
CCDC93-204ENST00000460781 TMEM238LA0A1B0GVL6 79 aa5.38□□□□□ -1.55
CCDC93-204ENST00000460781 A0A1W2PPZ6 126 aa5.38□□□□□ -1.55
CCDC93-204ENST00000460781 ALBP02768 609 aa5.38□□□□□ -1.55
CCDC93-204ENST00000460781 ACPPP15309 386 aa5.38□□□□□ -1.55
CCDC93-204ENST00000460781 HP1BP3Q5SSJ5 553 aaPredicted RBP5.38□□□□□ -1.55
CCDC93-204ENST00000460781 PRPF40BQ6NWY9 871 aaKnown RBP5.38□□□□□ -1.55
CCDC93-204ENST00000460781 CCNJLQ8IV13 435 aa5.38□□□□□ -1.55
CCDC93-204ENST00000460781 MAP4K3Q8IVH8 894 aa5.38□□□□□ -1.55
CCDC93-204ENST00000460781 BEND7Q8N7W2 519 aaPredicted RBP5.38□□□□□ -1.55
CCDC93-204ENST00000460781 TMEM87AQ8NBN3 555 aa5.38□□□□□ -1.55
CCDC93-204ENST00000460781 SLC7A3Q8WY07 619 aa5.38□□□□□ -1.55
CCDC93-204ENST00000460781 TTC9Q92623 222 aa5.38□□□□□ -1.55
CCDC93-204ENST00000460781 CRELD1Q96HD1 420 aa5.38□□□□□ -1.55
CCDC93-204ENST00000460781 FAM161BQ96MY7 647 aa5.38□□□□□ -1.55
CCDC93-204ENST00000460781 BHLHE41Q9C0J9 482 aaPredicted RBP5.38□□□□□ -1.55
CCDC93-204ENST00000460781 NAGPAQ9UK23 515 aa5.38□□□□□ -1.55
CCDC93-204ENST00000460781 HCN2Q9UL51 889 aa5.38□□□□□ -1.55
CCDC93-204ENST00000460781 PPM1HQ9ULR3 514 aa5.38□□□□□ -1.55
CCDC93-204ENST00000460781 TRIM33Q9UPN9 1127 aa5.38□□□□□ -1.55
CCDC93-204ENST00000460781 SHISA8B8ZZ34 492 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms