RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 SREBF2Q12772 1141 aa17.52■□□□□ 0.4
SCAMP4-206ENST00000460767 CCDC30Q5VVM6 783 aa17.52■□□□□ 0.4
SCAMP4-206ENST00000460767 PODNQ7Z5L7 613 aa17.52■□□□□ 0.4
SCAMP4-206ENST00000460767 CHMP4AQ9BY43 222 aa17.52■□□□□ 0.4
SCAMP4-206ENST00000460767 TBC1D8O95759 1140 aa17.51■□□□□ 0.39
SCAMP4-206ENST00000460767 EXOSC9Q06265 439 aaKnown RBP17.51■□□□□ 0.39
SCAMP4-206ENST00000460767 GOLGA2Q08379 1002 aa17.51■□□□□ 0.39
SCAMP4-206ENST00000460767 SLFN5Q08AF3 891 aa17.51■□□□□ 0.39
SCAMP4-206ENST00000460767 ZBTB38Q8NAP3 1195 aaPredicted RBP17.51■□□□□ 0.39
SCAMP4-206ENST00000460767 MYH16Q9H6N6 1097 aa17.51■□□□□ 0.39
SCAMP4-206ENST00000460767 PHAXQ9H814 394 aaKnown RBP17.51■□□□□ 0.39
SCAMP4-206ENST00000460767 COL1A1P02452 1464 aaPredicted RBP17.5■□□□□ 0.39
SCAMP4-206ENST00000460767 XDHP47989 1333 aa17.5■□□□□ 0.39
SCAMP4-206ENST00000460767 G3V3G9 751 aa17.5■□□□□ 0.39
SCAMP4-206ENST00000460767 DCAF8Q5TAQ9 597 aa17.5■□□□□ 0.39
SCAMP4-206ENST00000460767 ANKIB1Q9P2G1 1089 aa17.5■□□□□ 0.39
SCAMP4-206ENST00000460767 MED23Q9ULK4 1368 aa17.5■□□□□ 0.39
SCAMP4-206ENST00000460767 MYO3BQ8WXR4 1341 aa17.49■□□□□ 0.39
SCAMP4-206ENST00000460767 USP17L3A6NCW0 530 aa17.49■□□□□ 0.39
SCAMP4-206ENST00000460767 USP17L4A6NCW7 530 aa17.49■□□□□ 0.39
SCAMP4-206ENST00000460767 E9PSI1 815 aa17.49■□□□□ 0.39
SCAMP4-206ENST00000460767 ATP5J2-PTCD1G3V325 749 aa17.49■□□□□ 0.39
SCAMP4-206ENST00000460767 FKTNO75072 461 aa17.49■□□□□ 0.39
SCAMP4-206ENST00000460767 USP17L1Q7RTZ2 530 aa17.49■□□□□ 0.39
SCAMP4-206ENST00000460767 ALDH1A1P00352 501 aa17.48■□□□□ 0.39
SCAMP4-206ENST00000460767 NF2P35240 595 aa17.48■□□□□ 0.39
SCAMP4-206ENST00000460767 CCDC152Q4G0S7 254 aa17.48■□□□□ 0.39
SCAMP4-206ENST00000460767 MOB2Q70IA6 237 aa17.48■□□□□ 0.39
SCAMP4-206ENST00000460767 SEC31BQ9NQW1 1179 aa17.48■□□□□ 0.39
SCAMP4-206ENST00000460767 UBE2Q2LH0YL09 131 aa17.47■□□□□ 0.39
SCAMP4-206ENST00000460767 ATP2B4P23634 1241 aa17.47■□□□□ 0.39
SCAMP4-206ENST00000460767 HABP4Q5JVS0 413 aaKnown RBP17.47■□□□□ 0.39
SCAMP4-206ENST00000460767 INTS3Q68E01 1043 aaKnown RBP17.47■□□□□ 0.39
SCAMP4-206ENST00000460767 G2E3Q7L622 706 aa17.47■□□□□ 0.39
SCAMP4-206ENST00000460767 WNT10BO00744 389 aa17.46■□□□□ 0.39
SCAMP4-206ENST00000460767 PDE8AO60658 829 aa17.46■□□□□ 0.39
SCAMP4-206ENST00000460767 PCCAP05165 728 aaPredicted RBP17.46■□□□□ 0.39
SCAMP4-206ENST00000460767 CDCA7LQ96GN5 454 aa17.46■□□□□ 0.39
SCAMP4-206ENST00000460767 NBPF9Q3BBW0 867 aa17.45■□□□□ 0.38
SCAMP4-206ENST00000460767 DACT2Q5SW24 774 aa17.45■□□□□ 0.38
SCAMP4-206ENST00000460767 LDLRAD1Q5T700 205 aa17.45■□□□□ 0.38
SCAMP4-206ENST00000460767 CCDC191Q8NCU4 936 aa17.45■□□□□ 0.38
SCAMP4-206ENST00000460767 MYH3P11055 1940 aa17.45■□□□□ 0.38
SCAMP4-206ENST00000460767 ECM29Q5VYK3 1845 aa17.44■□□□□ 0.38
SCAMP4-206ENST00000460767 SLC4A2P04920 1241 aa17.44■□□□□ 0.38
SCAMP4-206ENST00000460767 INHBEP58166 350 aa17.44■□□□□ 0.38
SCAMP4-206ENST00000460767 RTL5Q5HYW3 569 aaPredicted RBP17.44■□□□□ 0.38
SCAMP4-206ENST00000460767 STRIP1Q5VSL9 837 aa17.44■□□□□ 0.38
SCAMP4-206ENST00000460767 SPRYD7Q5W111 196 aa17.44■□□□□ 0.38
SCAMP4-206ENST00000460767 ARMC9Q7Z3E5 817 aa17.44■□□□□ 0.38
SCAMP4-206ENST00000460767 ANKRD18AQ8IVF6 992 aa17.44■□□□□ 0.38
SCAMP4-206ENST00000460767 OGFOD1Q8N543 542 aa17.44■□□□□ 0.38
SCAMP4-206ENST00000460767 METTL22Q9BUU2 404 aaPredicted RBP17.44■□□□□ 0.38
SCAMP4-206ENST00000460767 UNCXA6NJT0 531 aa17.43■□□□□ 0.38
SCAMP4-206ENST00000460767 FLIIQ13045 1269 aa17.43■□□□□ 0.38
SCAMP4-206ENST00000460767 MAP3K11Q16584 847 aa17.43■□□□□ 0.38
SCAMP4-206ENST00000460767 KSR2Q6VAB6 950 aa17.43■□□□□ 0.38
SCAMP4-206ENST00000460767 APOBEC3FQ8IUX4 373 aaKnown RBP17.43■□□□□ 0.38
SCAMP4-206ENST00000460767 ZNF428Q96B54 188 aa17.43■□□□□ 0.38
SCAMP4-206ENST00000460767 PI4KAP2A4QPH2 592 aa17.42■□□□□ 0.38
SCAMP4-206ENST00000460767 MANSC4A6NHS7 340 aaPredicted RBP17.42■□□□□ 0.38
SCAMP4-206ENST00000460767 IGKV5-2P06315 115 aa17.42■□□□□ 0.38
SCAMP4-206ENST00000460767 ZBTB48P10074 688 aaPredicted RBP17.42■□□□□ 0.38
SCAMP4-206ENST00000460767 PTPN12Q05209 780 aaKnown RBP17.42■□□□□ 0.38
SCAMP4-206ENST00000460767 TTLL12Q14166 644 aaPredicted RBP17.42■□□□□ 0.38
SCAMP4-206ENST00000460767 PI4KAP1Q8N8J0 262 aa17.42■□□□□ 0.38
SCAMP4-206ENST00000460767 ZBED3Q96IU2 234 aaPredicted RBP17.42■□□□□ 0.38
SCAMP4-206ENST00000460767 STK31Q9BXU1 1019 aa17.42■□□□□ 0.38
SCAMP4-206ENST00000460767 PRAMEF18Q5VWM3 479 aa17.41■□□□□ 0.38
SCAMP4-206ENST00000460767 OTOP1Q7RTM1 612 aa17.41■□□□□ 0.38
SCAMP4-206ENST00000460767 RIC3Q7Z5B4 369 aa17.41■□□□□ 0.38
SCAMP4-206ENST00000460767 CDC5LQ99459 802 aaKnown RBP17.41■□□□□ 0.38
SCAMP4-206ENST00000460767 COA1Q9GZY4 146 aa17.41■□□□□ 0.38
SCAMP4-206ENST00000460767 R3HDMLQ9H3Y0 253 aa17.41■□□□□ 0.38
SCAMP4-206ENST00000460767 SPEF2Q9C093 1822 aa17.41■□□□□ 0.38
SCAMP4-206ENST00000460767 IFNL1Q8IU54 200 aa17.4■□□□□ 0.38
SCAMP4-206ENST00000460767 ARMC5Q96C12 935 aa17.4■□□□□ 0.38
SCAMP4-206ENST00000460767 BSDC1Q9NW68 430 aaPredicted RBP17.4■□□□□ 0.38
SCAMP4-206ENST00000460767 SCAF8Q9UPN6 1271 aaKnown RBP17.4■□□□□ 0.38
SCAMP4-206ENST00000460767 MAP3K2Q9Y2U5 619 aa17.4■□□□□ 0.38
SCAMP4-206ENST00000460767 DDX58O95786 925 aaKnown RBP17.39■□□□□ 0.37
SCAMP4-206ENST00000460767 CWC25Q9NXE8 425 aaPredicted RBP17.39■□□□□ 0.37
SCAMP4-206ENST00000460767 TRIM17Q9Y577 477 aa17.39■□□□□ 0.37
SCAMP4-206ENST00000460767 PPP2R3BQ9Y5P8 575 aa17.39■□□□□ 0.37
SCAMP4-206ENST00000460767 SSC5DA1L4H1 1573 aa17.39■□□□□ 0.37
SCAMP4-206ENST00000460767 POTEFA5A3E0 1075 aa17.38■□□□□ 0.37
SCAMP4-206ENST00000460767 CT47B1P0C2W7 299 aaPredicted RBP17.38■□□□□ 0.37
SCAMP4-206ENST00000460767 CTSWP56202 376 aa17.38■□□□□ 0.37
SCAMP4-206ENST00000460767 ERO1AQ96HE7 468 aa17.38■□□□□ 0.37
SCAMP4-206ENST00000460767 MINPP1Q9UNW1 487 aa17.38■□□□□ 0.37
SCAMP4-206ENST00000460767 CCT4P50991 539 aaKnown RBP17.37■□□□□ 0.37
SCAMP4-206ENST00000460767 FXR1P51114 621 aaKnown RBP eCLIP17.37■□□□□ 0.37
SCAMP4-206ENST00000460767 MKRN3Q13064 507 aaKnown RBP17.37■□□□□ 0.37
SCAMP4-206ENST00000460767 MRPL50Q8N5N7 158 aaKnown RBP17.37■□□□□ 0.37
SCAMP4-206ENST00000460767 MYD88Q99836 296 aa17.37■□□□□ 0.37
SCAMP4-206ENST00000460767 PTPN22Q9Y2R2 807 aa17.37■□□□□ 0.37
SCAMP4-206ENST00000460767 LEMD3Q9Y2U8 911 aa17.37■□□□□ 0.37
SCAMP4-206ENST00000460767 NEURL1BA8MQ27 555 aa17.36■□□□□ 0.37
SCAMP4-206ENST00000460767 SASH1O94885 1247 aa17.36■□□□□ 0.37
SCAMP4-206ENST00000460767 MTMR14Q8NCE2 650 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms