RNA–Protein interactions for RNA: ENST00000460100.1

IMP4-207, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-207ENST00000460100 SRGAP3O43295 1099 aa18.05■□□□□ 0.48
IMP4-207ENST00000460100 PDE8BO95263 885 aa18.05■□□□□ 0.48
IMP4-207ENST00000460100 VIL1P09327 827 aaKnown RBP18.05■□□□□ 0.48
IMP4-207ENST00000460100 RBM46Q8TBY0 533 aaKnown RBP18.05■□□□□ 0.48
IMP4-207ENST00000460100 HACL1Q9UJ83 578 aa18.05■□□□□ 0.48
IMP4-207ENST00000460100 PNMA6EA0A0J9YXQ4 647 aa18.04■□□□□ 0.48
IMP4-207ENST00000460100 KCNJ4P48050 445 aa18.04■□□□□ 0.48
IMP4-207ENST00000460100 C20orf194Q5TEA3 1177 aa18.04■□□□□ 0.48
IMP4-207ENST00000460100 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.04■□□□□ 0.48
IMP4-207ENST00000460100 GPRC5DQ9NZD1 345 aa18.04■□□□□ 0.48
IMP4-207ENST00000460100 PA2G4Q9UQ80 394 aaKnown RBP18.04■□□□□ 0.48
IMP4-207ENST00000460100 ADAMTSL1Q8N6G6 1762 aa18.04■□□□□ 0.48
IMP4-207ENST00000460100 FGFR2P21802 821 aa18.03■□□□□ 0.48
IMP4-207ENST00000460100 EPHX2P34913 555 aa18.03■□□□□ 0.48
IMP4-207ENST00000460100 GMPSP49915 693 aaPredicted RBP18.03■□□□□ 0.48
IMP4-207ENST00000460100 ATP8B2P98198 1209 aa18.03■□□□□ 0.48
IMP4-207ENST00000460100 POLA2Q14181 598 aa18.03■□□□□ 0.48
IMP4-207ENST00000460100 METTL24Q5JXM2 366 aa18.03■□□□□ 0.48
IMP4-207ENST00000460100 DPF2Q92785 391 aa18.03■□□□□ 0.48
IMP4-207ENST00000460100 CD209Q9NNX6 404 aa18.03■□□□□ 0.48
IMP4-207ENST00000460100 DDX19BQ9UMR2 479 aa18.03■□□□□ 0.48
IMP4-207ENST00000460100 COG6Q9Y2V7 657 aa18.03■□□□□ 0.48
IMP4-207ENST00000460100 G3V3G9 751 aa18.02■□□□□ 0.48
IMP4-207ENST00000460100 IL1R1P14778 569 aa18.02■□□□□ 0.48
IMP4-207ENST00000460100 IL15P40933 162 aaPredicted RBP18.02■□□□□ 0.48
IMP4-207ENST00000460100 EPS15P42566 896 aa18.02■□□□□ 0.48
IMP4-207ENST00000460100 DCAF8Q5TAQ9 597 aa18.02■□□□□ 0.48
IMP4-207ENST00000460100 SSH3Q8TE77 659 aa18.02■□□□□ 0.48
IMP4-207ENST00000460100 GMLQ99445 158 aa18.02■□□□□ 0.48
IMP4-207ENST00000460100 C1orf115Q9H7X2 142 aa18.02■□□□□ 0.48
IMP4-207ENST00000460100 ZBTB40Q9NUA8 1239 aa18.02■□□□□ 0.48
IMP4-207ENST00000460100 USP17L3A6NCW0 530 aa18.01■□□□□ 0.47
IMP4-207ENST00000460100 USP17L4A6NCW7 530 aa18.01■□□□□ 0.47
IMP4-207ENST00000460100 RPS12P25398 132 aaKnown RBP18.01■□□□□ 0.47
IMP4-207ENST00000460100 USP17L1Q7RTZ2 530 aa18.01■□□□□ 0.47
IMP4-207ENST00000460100 C16orf71Q8IYS4 520 aaPredicted RBP18.01■□□□□ 0.47
IMP4-207ENST00000460100 FAM84BQ96KN1 310 aaPredicted RBP18.01■□□□□ 0.47
IMP4-207ENST00000460100 SIL1Q9H173 461 aa18.01■□□□□ 0.47
IMP4-207ENST00000460100 ZBTB12Q9Y330 459 aaPredicted RBP18.01■□□□□ 0.47
IMP4-207ENST00000460100 POTEIP0CG38 1075 aa18■□□□□ 0.47
IMP4-207ENST00000460100 POTEJP0CG39 1038 aa18■□□□□ 0.47
IMP4-207ENST00000460100 LMOD1P29536 600 aaPredicted RBP18■□□□□ 0.47
IMP4-207ENST00000460100 DACT2Q5SW24 774 aa18■□□□□ 0.47
IMP4-207ENST00000460100 STRIP1Q5VSL9 837 aa18■□□□□ 0.47
IMP4-207ENST00000460100 RSBN1LQ6PCB5 846 aaPredicted RBP18■□□□□ 0.47
IMP4-207ENST00000460100 FBXO33Q7Z6M2 555 aa18■□□□□ 0.47
IMP4-207ENST00000460100 PNMA8AQ86V59 439 aaPredicted RBP18■□□□□ 0.47
IMP4-207ENST00000460100 FSTL1Q12841 308 aa17.99■□□□□ 0.47
IMP4-207ENST00000460100 PUM3Q15397 648 aaKnown RBP17.99■□□□□ 0.47
IMP4-207ENST00000460100 CEP85Q6P2H3 762 aa17.99■□□□□ 0.47
IMP4-207ENST00000460100 ZNF804AQ7Z570 1209 aa17.99■□□□□ 0.47
IMP4-207ENST00000460100 AGBL3Q8NEM8 1001 aa17.99■□□□□ 0.47
IMP4-207ENST00000460100 TDRD7Q8NHU6 1098 aaKnown RBP17.99■□□□□ 0.47
IMP4-207ENST00000460100 ADARB2Q9NS39 739 aaKnown RBP17.99■□□□□ 0.47
IMP4-207ENST00000460100 CNOT7Q9UIV1 285 aaKnown RBP17.99■□□□□ 0.47
IMP4-207ENST00000460100 SHTN1A0MZ66 631 aa17.98■□□□□ 0.47
IMP4-207ENST00000460100 GYG1P46976 350 aa17.98■□□□□ 0.47
IMP4-207ENST00000460100 USP50Q70EL3 339 aaPredicted RBP17.98■□□□□ 0.47
IMP4-207ENST00000460100 LDHDQ86WU2 507 aa17.98■□□□□ 0.47
IMP4-207ENST00000460100 SMC1BQ8NDV3 1235 aa17.98■□□□□ 0.47
IMP4-207ENST00000460100 LPIN2Q92539 896 aa17.98■□□□□ 0.47
IMP4-207ENST00000460100 CEP126Q9P2H0 1117 aa17.98■□□□□ 0.47
IMP4-207ENST00000460100 SASH1O94885 1247 aa17.97■□□□□ 0.47
IMP4-207ENST00000460100 HIBADHP31937 336 aaKnown RBP17.97■□□□□ 0.47
IMP4-207ENST00000460100 RRP1P56182 461 aaKnown RBP17.97■□□□□ 0.47
IMP4-207ENST00000460100 TTLL5Q6EMB2 1281 aa17.97■□□□□ 0.47
IMP4-207ENST00000460100 MICALL2Q8IY33 904 aa17.97■□□□□ 0.47
IMP4-207ENST00000460100 CHMP4BQ9H444 224 aaKnown RBP17.97■□□□□ 0.47
IMP4-207ENST00000460100 NOP58Q9Y2X3 529 aaKnown RBP17.97■□□□□ 0.47
IMP4-207ENST00000460100 FAM205AQ6ZU69 1335 aa17.97■□□□□ 0.47
IMP4-207ENST00000460100 ZBTB22O15209 634 aa17.96■□□□□ 0.47
IMP4-207ENST00000460100 HIRAP54198 1017 aaPredicted RBP17.96■□□□□ 0.47
IMP4-207ENST00000460100 ZNF280AP59817 542 aaPredicted RBP17.96■□□□□ 0.47
IMP4-207ENST00000460100 GTF2IP78347 998 aa17.96■□□□□ 0.47
IMP4-207ENST00000460100 CHADLQ6NUI6 762 aa17.96■□□□□ 0.47
IMP4-207ENST00000460100 PGAP2Q9UHJ9 254 aa17.96■□□□□ 0.47
IMP4-207ENST00000460100 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.96■□□□□ 0.47
IMP4-207ENST00000460100 MYO3BQ8WXR4 1341 aa17.96■□□□□ 0.46
IMP4-207ENST00000460100 IFIT1P09914 478 aaKnown RBP17.95■□□□□ 0.46
IMP4-207ENST00000460100 FKBP1AP62942 108 aaKnown RBP17.95■□□□□ 0.46
IMP4-207ENST00000460100 ATP2B3Q16720 1220 aa17.95■□□□□ 0.46
IMP4-207ENST00000460100 SIRT2Q8IXJ6 389 aa17.95■□□□□ 0.46
IMP4-207ENST00000460100 RPAP2Q8IXW5 612 aaPredicted RBP17.95■□□□□ 0.46
IMP4-207ENST00000460100 MXD3Q9BW11 206 aa17.95■□□□□ 0.46
IMP4-207ENST00000460100 ARAP2Q8WZ64 1704 aa17.95■□□□□ 0.46
IMP4-207ENST00000460100 H7C1D1 291 aa17.94■□□□□ 0.46
IMP4-207ENST00000460100 SLC5A1P13866 664 aa17.94■□□□□ 0.46
IMP4-207ENST00000460100 BCAMP50895 628 aa17.94■□□□□ 0.46
IMP4-207ENST00000460100 TFCP2Q12800 502 aa17.94■□□□□ 0.46
IMP4-207ENST00000460100 EAPPQ56P03 285 aaPredicted RBP17.94■□□□□ 0.46
IMP4-207ENST00000460100 CAVIN4Q5BKX8 364 aa17.94■□□□□ 0.46
IMP4-207ENST00000460100 CERS5Q8N5B7 392 aa17.94■□□□□ 0.46
IMP4-207ENST00000460100 TRPM4Q8TD43 1214 aa17.94■□□□□ 0.46
IMP4-207ENST00000460100 ITGBL1O95965 494 aaPredicted RBP17.93■□□□□ 0.46
IMP4-207ENST00000460100 EGFRP00533 1210 aa17.93■□□□□ 0.46
IMP4-207ENST00000460100 USP17L8P0C7I0 530 aa17.93■□□□□ 0.46
IMP4-207ENST00000460100 MMP14P50281 582 aa17.93■□□□□ 0.46
IMP4-207ENST00000460100 G3BP1Q13283 466 aaKnown RBP eCLIP17.93■□□□□ 0.46
IMP4-207ENST00000460100 ZC3H15Q8WU90 426 aaKnown RBP17.93■□□□□ 0.46
IMP4-207ENST00000460100 SURF6O75683 361 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms