RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 CAMTA2O94983 1202 aa10.95□□□□□ -0.66
VPS50-207ENST00000458530 SERPINB2P05120 415 aa10.95□□□□□ -0.66
VPS50-207ENST00000458530 DPY19L2Q6NUT2 758 aa10.95□□□□□ -0.66
VPS50-207ENST00000458530 LMBR1LQ6UX01 489 aa10.95□□□□□ -0.66
VPS50-207ENST00000458530 ZNF34Q8IZ26 560 aa10.95□□□□□ -0.66
VPS50-207ENST00000458530 ZFP91Q96JP5 570 aaPredicted RBP10.95□□□□□ -0.66
VPS50-207ENST00000458530 MKRN1Q9UHC7 482 aaKnown RBP10.95□□□□□ -0.66
VPS50-207ENST00000458530 TRMT112Q9UI30 125 aaKnown RBP10.95□□□□□ -0.66
VPS50-207ENST00000458530 TTC41PQ6P2S7 1318 aa10.94□□□□□ -0.66
VPS50-207ENST00000458530 SH3TC1Q8TE82 1336 aa10.94□□□□□ -0.66
VPS50-207ENST00000458530 ERC2O15083 957 aa10.94□□□□□ -0.66
VPS50-207ENST00000458530 ZPR1O75312 459 aa10.94□□□□□ -0.66
VPS50-207ENST00000458530 CDC45O75419 566 aa10.94□□□□□ -0.66
VPS50-207ENST00000458530 ECM2O94769 699 aaPredicted RBP10.94□□□□□ -0.66
VPS50-207ENST00000458530 IFIT2P09913 472 aaKnown RBP10.94□□□□□ -0.66
VPS50-207ENST00000458530 GPTP24298 496 aa10.94□□□□□ -0.66
VPS50-207ENST00000458530 CTCFP49711 727 aaPredicted RBP10.94□□□□□ -0.66
VPS50-207ENST00000458530 PDE1AP54750 535 aa10.94□□□□□ -0.66
VPS50-207ENST00000458530 FOXO4P98177 505 aa10.94□□□□□ -0.66
VPS50-207ENST00000458530 HLFQ16534 295 aa10.94□□□□□ -0.66
VPS50-207ENST00000458530 CCDC57Q2TAC2 916 aa10.94□□□□□ -0.66
VPS50-207ENST00000458530 L3MBTL3Q96JM7 780 aaPredicted RBP10.94□□□□□ -0.66
VPS50-207ENST00000458530 UTP14AQ9BVJ6 771 aaKnown RBP10.94□□□□□ -0.66
VPS50-207ENST00000458530 PCDH10Q9P2E7 1040 aa10.94□□□□□ -0.66
VPS50-207ENST00000458530 STAP2Q9UGK3 403 aa10.94□□□□□ -0.66
VPS50-207ENST00000458530 ANKRD31Q8N7Z5 1873 aa10.93□□□□□ -0.66
VPS50-207ENST00000458530 ADAMTSL1Q8N6G6 1762 aa10.93□□□□□ -0.66
VPS50-207ENST00000458530 PDE8AO60658 829 aa10.93□□□□□ -0.66
VPS50-207ENST00000458530 ITGBL1O95965 494 aaPredicted RBP10.93□□□□□ -0.66
VPS50-207ENST00000458530 RGS19P49795 217 aa10.93□□□□□ -0.66
VPS50-207ENST00000458530 TAF7LQ5H9L4 462 aa10.93□□□□□ -0.66
VPS50-207ENST00000458530 C2CD5Q86YS7 1000 aa10.93□□□□□ -0.66
VPS50-207ENST00000458530 EFCAB3Q8N7B9 438 aa10.93□□□□□ -0.66
VPS50-207ENST00000458530 NYXQ9GZU5 481 aa10.93□□□□□ -0.66
VPS50-207ENST00000458530 NIP7Q9Y221 180 aaKnown RBP eCLIP10.93□□□□□ -0.66
VPS50-207ENST00000458530 SPEF2Q9C093 1822 aa10.93□□□□□ -0.66
VPS50-207ENST00000458530 SALL3Q9BXA9 1300 aa10.92□□□□□ -0.66
VPS50-207ENST00000458530 H0YIN7 160 aa10.92□□□□□ -0.66
VPS50-207ENST00000458530 IRS4O14654 1257 aaPredicted RBP10.92□□□□□ -0.66
VPS50-207ENST00000458530 CIAO1O76071 339 aa10.92□□□□□ -0.66
VPS50-207ENST00000458530 IL15P40933 162 aaPredicted RBP10.92□□□□□ -0.66
VPS50-207ENST00000458530 VEGFBP49765 207 aa10.92□□□□□ -0.66
VPS50-207ENST00000458530 CTSWP56202 376 aa10.92□□□□□ -0.66
VPS50-207ENST00000458530 IFIT5Q13325 482 aaKnown RBP10.92□□□□□ -0.66
VPS50-207ENST00000458530 ERFEQ4G0M1 354 aa10.92□□□□□ -0.66
VPS50-207ENST00000458530 EPHA10Q5JZY3 1008 aa10.92□□□□□ -0.66
VPS50-207ENST00000458530 SLAIN1Q8ND83 568 aa10.92□□□□□ -0.66
VPS50-207ENST00000458530 DDRGK1Q96HY6 314 aa10.92□□□□□ -0.66
VPS50-207ENST00000458530 BCL11AQ9H165 835 aa10.92□□□□□ -0.66
VPS50-207ENST00000458530 IL1RAPL2Q9NP60 686 aa10.92□□□□□ -0.66
VPS50-207ENST00000458530 PA2G4Q9UQ80 394 aaKnown RBP10.92□□□□□ -0.66
VPS50-207ENST00000458530 COL11A2P13942 1736 aaPredicted RBP10.92□□□□□ -0.66
VPS50-207ENST00000458530 UBN2Q6ZU65 1347 aa10.91□□□□□ -0.66
VPS50-207ENST00000458530 RASSF10A6NK89 507 aa10.91□□□□□ -0.66
VPS50-207ENST00000458530 GLRX3O76003 335 aaKnown RBP10.91□□□□□ -0.66
VPS50-207ENST00000458530 RFX5P48382 616 aaPredicted RBP10.91□□□□□ -0.66
VPS50-207ENST00000458530 PTPN12Q05209 780 aaKnown RBP10.91□□□□□ -0.66
VPS50-207ENST00000458530 RTL5Q5HYW3 569 aaPredicted RBP10.91□□□□□ -0.66
VPS50-207ENST00000458530 AACSQ86V21 672 aa10.91□□□□□ -0.66
VPS50-207ENST00000458530 LDHDQ86WU2 507 aa10.91□□□□□ -0.66
VPS50-207ENST00000458530 JARID2Q92833 1246 aaPredicted RBP10.91□□□□□ -0.66
VPS50-207ENST00000458530 FAM89AQ96GI7 184 aa10.91□□□□□ -0.66
VPS50-207ENST00000458530 ABHD8Q96I13 439 aa10.91□□□□□ -0.66
VPS50-207ENST00000458530 BRIP1Q9BX63 1249 aa10.91□□□□□ -0.66
VPS50-207ENST00000458530 SIL1Q9H173 461 aa10.91□□□□□ -0.66
VPS50-207ENST00000458530 ARAP2Q8WZ64 1704 aa10.91□□□□□ -0.66
VPS50-207ENST00000458530 THSD7BQ9C0I4 1608 aa10.91□□□□□ -0.66
VPS50-207ENST00000458530 SCN4AP35499 1836 aa10.91□□□□□ -0.66
VPS50-207ENST00000458530 RTL9Q8NET4 1388 aa10.9□□□□□ -0.66
VPS50-207ENST00000458530 ANKRD18BA2A2Z9 1011 aa10.9□□□□□ -0.66
VPS50-207ENST00000458530 DDNO94850 711 aaPredicted RBP10.9□□□□□ -0.66
VPS50-207ENST00000458530 CSF1RP07333 972 aa10.9□□□□□ -0.66
VPS50-207ENST00000458530 HSPA8P11142 646 aaKnown RBP10.9□□□□□ -0.66
VPS50-207ENST00000458530 CCDC152Q4G0S7 254 aa10.9□□□□□ -0.66
VPS50-207ENST00000458530 CNTROBQ8N137 903 aa10.9□□□□□ -0.66
VPS50-207ENST00000458530 C7orf43Q8WVR3 580 aa10.9□□□□□ -0.66
VPS50-207ENST00000458530 FAM163AQ96GL9 167 aaPredicted RBP10.9□□□□□ -0.66
VPS50-207ENST00000458530 TAF1DQ9H5J8 278 aaPredicted RBP10.9□□□□□ -0.66
VPS50-207ENST00000458530 GPR108Q9NPR9 543 aa10.9□□□□□ -0.66
VPS50-207ENST00000458530 ECHDC1Q9NTX5 307 aa10.9□□□□□ -0.66
VPS50-207ENST00000458530 AKAP2Q9Y2D5 859 aa10.9□□□□□ -0.66
VPS50-207ENST00000458530 TMEM88BA6NKF7 163 aa10.89□□□□□ -0.67
VPS50-207ENST00000458530 EYA2O00167 538 aa10.89□□□□□ -0.67
VPS50-207ENST00000458530 C21orf2O43822 256 aa10.89□□□□□ -0.67
VPS50-207ENST00000458530 NTSR2O95665 410 aa10.89□□□□□ -0.67
VPS50-207ENST00000458530 GSPT1P15170 499 aaKnown RBP10.89□□□□□ -0.67
VPS50-207ENST00000458530 LBX1P52954 281 aa10.89□□□□□ -0.67
VPS50-207ENST00000458530 SUSD4Q5VX71 490 aa10.89□□□□□ -0.67
VPS50-207ENST00000458530 OTUD7AQ8TE49 926 aaPredicted RBP10.89□□□□□ -0.67
VPS50-207ENST00000458530 SETDB2Q96T68 719 aa10.89□□□□□ -0.67
VPS50-207ENST00000458530 ZNF609O15014 1411 aa10.89□□□□□ -0.67
VPS50-207ENST00000458530 IQCA1LA6NCM1 817 aa10.88□□□□□ -0.67
VPS50-207ENST00000458530 TRIM6-TRIM34B2RNG4 842 aa10.88□□□□□ -0.67
VPS50-207ENST00000458530 SASH1O94885 1247 aa10.88□□□□□ -0.67
VPS50-207ENST00000458530 SDSP20132 328 aa10.88□□□□□ -0.67
VPS50-207ENST00000458530 GTF2E1P29083 439 aaPredicted RBP10.88□□□□□ -0.67
VPS50-207ENST00000458530 PDE6BP35913 854 aa10.88□□□□□ -0.67
VPS50-207ENST00000458530 LCE2DQ5TA82 110 aaPredicted RBP10.88□□□□□ -0.67
VPS50-207ENST00000458530 PRR5LQ6MZQ0 368 aa10.88□□□□□ -0.67
VPS50-207ENST00000458530 NUTM1Q86Y26 1132 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms