RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 SEC31BQ9NQW1 1179 aa22.35■■□□□ 1.17
FAM3A-216ENST00000449971 PDE8AO60658 829 aa22.34■■□□□ 1.17
FAM3A-216ENST00000449971 CCDC85AQ96PX6 553 aaPredicted RBP22.34■■□□□ 1.17
FAM3A-216ENST00000449971 NEURL1BA8MQ27 555 aa22.33■■□□□ 1.17
FAM3A-216ENST00000449971 MOB2Q70IA6 237 aa22.33■■□□□ 1.17
FAM3A-216ENST00000449971 DNAAF4Q8WXU2 420 aa22.33■■□□□ 1.17
FAM3A-216ENST00000449971 GGA1Q9UJY5 639 aa22.33■■□□□ 1.17
FAM3A-216ENST00000449971 HDAC9Q9UKV0 1011 aa22.33■■□□□ 1.17
FAM3A-216ENST00000449971 SCN9AQ15858 1988 aa22.32■■□□□ 1.16
FAM3A-216ENST00000449971 CCDC152Q4G0S7 254 aa22.32■■□□□ 1.16
FAM3A-216ENST00000449971 E9PSI1 815 aa22.31■■□□□ 1.16
FAM3A-216ENST00000449971 TBC1D8O95759 1140 aa22.31■■□□□ 1.16
FAM3A-216ENST00000449971 MKRN3Q13064 507 aaKnown RBP22.31■■□□□ 1.16
FAM3A-216ENST00000449971 TTLL12Q14166 644 aaPredicted RBP22.31■■□□□ 1.16
FAM3A-216ENST00000449971 PRAMEF18Q5VWM3 479 aa22.31■■□□□ 1.16
FAM3A-216ENST00000449971 RSBN1LQ6PCB5 846 aaPredicted RBP22.31■■□□□ 1.16
FAM3A-216ENST00000449971 HPS5Q9UPZ3 1129 aa22.31■■□□□ 1.16
FAM3A-216ENST00000449971 UBE2Q2LH0YL09 131 aa22.3■■□□□ 1.16
FAM3A-216ENST00000449971 H7C1W4 665 aa22.29■■□□□ 1.16
FAM3A-216ENST00000449971 GCKRQ14397 625 aa22.29■■□□□ 1.16
FAM3A-216ENST00000449971 DIEXFQ68CQ4 756 aaKnown RBP22.29■■□□□ 1.16
FAM3A-216ENST00000449971 UBE3BQ7Z3V4 1068 aa22.29■■□□□ 1.16
FAM3A-216ENST00000449971 LINS1Q8NG48 757 aa22.29■■□□□ 1.16
FAM3A-216ENST00000449971 F6X3S4 739 aa22.28■■□□□ 1.16
FAM3A-216ENST00000449971 ZNF280AP59817 542 aaPredicted RBP22.28■■□□□ 1.16
FAM3A-216ENST00000449971 SLFN5Q08AF3 891 aa22.28■■□□□ 1.16
FAM3A-216ENST00000449971 PRPF38BQ5VTL8 546 aaKnown RBP22.28■■□□□ 1.16
FAM3A-216ENST00000449971 FBXW7Q969H0 707 aa22.28■■□□□ 1.16
FAM3A-216ENST00000449971 MYOZ2Q9NPC6 264 aa22.28■■□□□ 1.16
FAM3A-216ENST00000449971 USP17L8P0C7I0 530 aa22.27■■□□□ 1.16
FAM3A-216ENST00000449971 CTSWP56202 376 aa22.27■■□□□ 1.16
FAM3A-216ENST00000449971 AGBL3Q8NEM8 1001 aa22.27■■□□□ 1.16
FAM3A-216ENST00000449971 ZNF296Q8WUU4 475 aaPredicted RBP22.27■■□□□ 1.16
FAM3A-216ENST00000449971 CDCA7LQ96GN5 454 aa22.27■■□□□ 1.16
FAM3A-216ENST00000449971 PODXL2Q9NZ53 605 aa22.27■■□□□ 1.16
FAM3A-216ENST00000449971 REM2Q8IYK8 340 aaPredicted RBP22.26■■□□□ 1.15
FAM3A-216ENST00000449971 MIER1Q8N108 512 aa22.26■■□□□ 1.15
FAM3A-216ENST00000449971 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.26■■□□□ 1.15
FAM3A-216ENST00000449971 ANKRD18AQ8IVF6 992 aa22.25■■□□□ 1.15
FAM3A-216ENST00000449971 TTLL11Q8NHH1 800 aa22.25■■□□□ 1.15
FAM3A-216ENST00000449971 USP17L3A6NCW0 530 aa22.24■■□□□ 1.15
FAM3A-216ENST00000449971 USP17L4A6NCW7 530 aa22.24■■□□□ 1.15
FAM3A-216ENST00000449971 FKBP1BP68106 108 aa22.24■■□□□ 1.15
FAM3A-216ENST00000449971 BEND3Q5T5X7 828 aa22.24■■□□□ 1.15
FAM3A-216ENST00000449971 USP17L1Q7RTZ2 530 aa22.24■■□□□ 1.15
FAM3A-216ENST00000449971 MXD3Q9BW11 206 aa22.24■■□□□ 1.15
FAM3A-216ENST00000449971 PAPPA2Q9BXP8 1791 aa22.23■■□□□ 1.15
FAM3A-216ENST00000449971 PRKG1Q13976 671 aa22.23■■□□□ 1.15
FAM3A-216ENST00000449971 NBPF9Q3BBW0 867 aa22.23■■□□□ 1.15
FAM3A-216ENST00000449971 SLC4A10Q6U841 1118 aa22.23■■□□□ 1.15
FAM3A-216ENST00000449971 CDC5LQ99459 802 aaKnown RBP22.23■■□□□ 1.15
FAM3A-216ENST00000449971 GREM2Q9H772 168 aa22.23■■□□□ 1.15
FAM3A-216ENST00000449971 WTIPA6NIX2 430 aaPredicted RBP22.22■■□□□ 1.15
FAM3A-216ENST00000449971 CASP7P55210 303 aa22.22■■□□□ 1.15
FAM3A-216ENST00000449971 PKN2Q16513 984 aaKnown RBP22.22■■□□□ 1.15
FAM3A-216ENST00000449971 MRPL50Q8N5N7 158 aaKnown RBP22.22■■□□□ 1.15
FAM3A-216ENST00000449971 XDHP47989 1333 aa22.22■■□□□ 1.15
FAM3A-216ENST00000449971 GMLQ99445 158 aa22.21■■□□□ 1.15
FAM3A-216ENST00000449971 PITPNM2Q9BZ72 1349 aa22.21■■□□□ 1.15
FAM3A-216ENST00000449971 ATP2B4P23634 1241 aa22.2■■□□□ 1.14
FAM3A-216ENST00000449971 PLA2G12BQ9BX93 195 aa22.2■■□□□ 1.14
FAM3A-216ENST00000449971 GPR25O00155 361 aa22.19■■□□□ 1.14
FAM3A-216ENST00000449971 NF2P35240 595 aa22.19■■□□□ 1.14
FAM3A-216ENST00000449971 TRMT2AQ8IZ69 625 aaKnown RBP22.19■■□□□ 1.14
FAM3A-216ENST00000449971 SSH1Q8WYL5 1049 aa22.19■■□□□ 1.14
FAM3A-216ENST00000449971 SASH1O94885 1247 aa22.18■■□□□ 1.14
FAM3A-216ENST00000449971 PODNQ7Z5L7 613 aa22.18■■□□□ 1.14
FAM3A-216ENST00000449971 OGFOD1Q8N543 542 aa22.18■■□□□ 1.14
FAM3A-216ENST00000449971 SRCIN1Q9C0H9 1055 aa22.18■■□□□ 1.14
FAM3A-216ENST00000449971 ALDH1L1O75891 902 aa22.17■■□□□ 1.14
FAM3A-216ENST00000449971 CSF1RP07333 972 aa22.17■■□□□ 1.14
FAM3A-216ENST00000449971 BSDC1Q9NW68 430 aaPredicted RBP22.17■■□□□ 1.14
FAM3A-216ENST00000449971 C9orf78Q9NZ63 289 aaPredicted RBP22.17■■□□□ 1.14
FAM3A-216ENST00000449971 CACNA1FO60840 1977 aa22.17■■□□□ 1.14
FAM3A-216ENST00000449971 ITGA6P23229 1130 aa22.16■■□□□ 1.14
FAM3A-216ENST00000449971 IGHMBP2P38935 993 aaKnown RBP22.16■■□□□ 1.14
FAM3A-216ENST00000449971 FBXO46Q6PJ61 603 aaPredicted RBP22.16■■□□□ 1.14
FAM3A-216ENST00000449971 R3HDMLQ9H3Y0 253 aa22.16■■□□□ 1.14
FAM3A-216ENST00000449971 ZNF609O15014 1411 aa22.15■■□□□ 1.14
FAM3A-216ENST00000449971 GRM8O00222 908 aa22.15■■□□□ 1.14
FAM3A-216ENST00000449971 WNT10BO00744 389 aa22.15■■□□□ 1.14
FAM3A-216ENST00000449971 FKTNO75072 461 aa22.15■■□□□ 1.14
FAM3A-216ENST00000449971 TM4SF4P48230 202 aa22.15■■□□□ 1.14
FAM3A-216ENST00000449971 PTPN12Q05209 780 aaKnown RBP22.15■■□□□ 1.14
FAM3A-216ENST00000449971 SREBF2Q12772 1141 aa22.15■■□□□ 1.14
FAM3A-216ENST00000449971 MINPP1Q9UNW1 487 aa22.15■■□□□ 1.14
FAM3A-216ENST00000449971 FZD1Q9UP38 647 aa22.15■■□□□ 1.14
FAM3A-216ENST00000449971 FOXO4P98177 505 aa22.14■■□□□ 1.13
FAM3A-216ENST00000449971 ALDH1L2Q3SY69 923 aa22.14■■□□□ 1.13
FAM3A-216ENST00000449971 DACT2Q5SW24 774 aa22.14■■□□□ 1.13
FAM3A-216ENST00000449971 ARMC9Q7Z3E5 817 aa22.14■■□□□ 1.13
FAM3A-216ENST00000449971 MPHOSPH8Q99549 860 aa22.14■■□□□ 1.13
FAM3A-216ENST00000449971 SMC4Q9NTJ3 1288 aa22.14■■□□□ 1.13
FAM3A-216ENST00000449971 CHMP3Q9Y3E7 222 aa22.14■■□□□ 1.13
FAM3A-216ENST00000449971 MKI67P46013 3256 aaKnown RBP22.14■■□□□ 1.13
FAM3A-216ENST00000449971 PSME4Q14997 1843 aa22.13■■□□□ 1.13
FAM3A-216ENST00000449971 PTPRCP08575 1304 aa22.13■■□□□ 1.13
FAM3A-216ENST00000449971 ANKRD18BA2A2Z9 1011 aa22.13■■□□□ 1.13
FAM3A-216ENST00000449971 LMBR1LQ6UX01 489 aa22.12■■□□□ 1.13
FAM3A-216ENST00000449971 KIAA0825Q8IV33 1275 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms