RNA–Protein interactions for RNA: ENST00000446547.5

RAB5A-205, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5A, Length 1,358 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-205ENST00000446547 VAMP1P23763 118 aa7.47□□□□□ -1.21
RAB5A-205ENST00000446547 C1orf53Q5VUE5 145 aa7.47□□□□□ -1.21
RAB5A-205ENST00000446547 FAM161BQ96MY7 647 aa7.47□□□□□ -1.21
RAB5A-205ENST00000446547 KRTAP9-2Q9BYQ4 174 aa7.47□□□□□ -1.21
RAB5A-205ENST00000446547 LRP6O75581 1613 aa7.47□□□□□ -1.21
RAB5A-205ENST00000446547 ATP10BO94823 1461 aa7.47□□□□□ -1.21
RAB5A-205ENST00000446547 ZNF142P52746 1687 aaPredicted RBP7.47□□□□□ -1.21
RAB5A-205ENST00000446547 RNF17Q9BXT8 1623 aaKnown RBP7.46□□□□□ -1.21
RAB5A-205ENST00000446547 LINC00114Q6XXX2 140 aa7.46□□□□□ -1.21
RAB5A-205ENST00000446547 GJD3Q8N144 294 aa7.46□□□□□ -1.21
RAB5A-205ENST00000446547 RHPN1Q8TCX5 695 aa7.46□□□□□ -1.21
RAB5A-205ENST00000446547 DUSP9Q99956 384 aaKnown RBP7.46□□□□□ -1.21
RAB5A-205ENST00000446547 MYO3AQ8NEV4 1616 aa7.46□□□□□ -1.22
RAB5A-205ENST00000446547 A6NHS1 94 aa7.46□□□□□ -1.22
RAB5A-205ENST00000446547 XPCQ01831 940 aaPredicted RBP7.46□□□□□ -1.22
RAB5A-205ENST00000446547 UBAP2LQ14157 1087 aaKnown RBP7.46□□□□□ -1.22
RAB5A-205ENST00000446547 C8orf34Q49A92 452 aa7.46□□□□□ -1.22
RAB5A-205ENST00000446547 EDARADDQ8WWZ3 215 aa7.46□□□□□ -1.22
RAB5A-205ENST00000446547 NUDT16Q96DE0 195 aaKnown RBP7.46□□□□□ -1.22
RAB5A-205ENST00000446547 BACH2Q9BYV9 841 aa7.46□□□□□ -1.22
RAB5A-205ENST00000446547 PARP2Q9UGN5 583 aa7.46□□□□□ -1.22
RAB5A-205ENST00000446547 PHF24Q9UPV7 400 aa7.46□□□□□ -1.22
RAB5A-205ENST00000446547 LRP5O75197 1615 aa7.45□□□□□ -1.22
RAB5A-205ENST00000446547 CEP170BQ9Y4F5 1589 aaPredicted RBP7.45□□□□□ -1.22
RAB5A-205ENST00000446547 MICAL2O94851 1124 aa7.45□□□□□ -1.22
RAB5A-205ENST00000446547 LBRQ14739 615 aaKnown RBP7.45□□□□□ -1.22
RAB5A-205ENST00000446547 GOLGA6L1Q8N7Z2 621 aa7.45□□□□□ -1.22
RAB5A-205ENST00000446547 ZNF280CQ8ND82 737 aa7.45□□□□□ -1.22
RAB5A-205ENST00000446547 C7orf43Q8WVR3 580 aa7.45□□□□□ -1.22
RAB5A-205ENST00000446547 BCL11AQ9H165 835 aa7.45□□□□□ -1.22
RAB5A-205ENST00000446547 GGNBP2Q9H3C7 697 aa7.45□□□□□ -1.22
RAB5A-205ENST00000446547 PNMA6FA0A0J9YX94 578 aa7.44□□□□□ -1.22
RAB5A-205ENST00000446547 PRPF40AO75400 957 aaKnown RBP7.44□□□□□ -1.22
RAB5A-205ENST00000446547 YY1P25490 414 aa7.44□□□□□ -1.22
RAB5A-205ENST00000446547 USP5P45974 858 aa7.44□□□□□ -1.22
RAB5A-205ENST00000446547 NBPF1Q3BBV0 1214 aa7.44□□□□□ -1.22
RAB5A-205ENST00000446547 ALKBH8Q96BT7 664 aaKnown RBP7.44□□□□□ -1.22
RAB5A-205ENST00000446547 HSH2DQ96JZ2 352 aa7.44□□□□□ -1.22
RAB5A-205ENST00000446547 SUSD3Q96L08 255 aa7.44□□□□□ -1.22
RAB5A-205ENST00000446547 USP35Q9P2H5 1018 aa7.44□□□□□ -1.22
RAB5A-205ENST00000446547 USP20Q9Y2K6 914 aa7.44□□□□□ -1.22
RAB5A-205ENST00000446547 SUPT6HQ7KZ85 1726 aaKnown RBP7.44□□□□□ -1.22
RAB5A-205ENST00000446547 RGS12O14924 1447 aa7.43□□□□□ -1.22
RAB5A-205ENST00000446547 RAPGEF6Q8TEU7 1601 aa7.43□□□□□ -1.22
RAB5A-205ENST00000446547 KRTAP9-6A0A140TA67 174 aa7.43□□□□□ -1.22
RAB5A-205ENST00000446547 OPLAHO14841 1288 aa7.43□□□□□ -1.22
RAB5A-205ENST00000446547 PCSK2P16519 638 aa7.43□□□□□ -1.22
RAB5A-205ENST00000446547 ATP2B2Q01814 1243 aa7.43□□□□□ -1.22
RAB5A-205ENST00000446547 ORC1Q13415 861 aa7.43□□□□□ -1.22
RAB5A-205ENST00000446547 MRPL58Q14197 206 aaKnown RBP7.43□□□□□ -1.22
RAB5A-205ENST00000446547 BICDL1Q6ZP65 573 aa7.43□□□□□ -1.22
RAB5A-205ENST00000446547 SUV39H2Q9H5I1 410 aa7.43□□□□□ -1.22
RAB5A-205ENST00000446547 RRAGCQ9HB90 399 aa7.43□□□□□ -1.22
RAB5A-205ENST00000446547 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.43□□□□□ -1.22
RAB5A-205ENST00000446547 A0A1B0GTH6 734 aa7.42□□□□□ -1.22
RAB5A-205ENST00000446547 TATP17735 454 aaPredicted RBP7.42□□□□□ -1.22
RAB5A-205ENST00000446547 ENOX2Q16206 610 aaKnown RBP7.42□□□□□ -1.22
RAB5A-205ENST00000446547 SLCO4C1Q6ZQN7 724 aa7.42□□□□□ -1.22
RAB5A-205ENST00000446547 TTC16Q8NEE8 873 aa7.42□□□□□ -1.22
RAB5A-205ENST00000446547 NPATQ14207 1427 aa7.42□□□□□ -1.22
RAB5A-205ENST00000446547 CDK12Q9NYV4 1490 aaPredicted RBP7.41□□□□□ -1.22
RAB5A-205ENST00000446547 LOC105371045A0A1W2PR82 267 aa7.41□□□□□ -1.22
RAB5A-205ENST00000446547 C1QTNF9BB2RNN3 333 aa7.41□□□□□ -1.22
RAB5A-205ENST00000446547 TGFBR3LH3BV60 316 aa7.41□□□□□ -1.22
RAB5A-205ENST00000446547 PIK3R2O00459 728 aa7.41□□□□□ -1.22
RAB5A-205ENST00000446547 ITGB7P26010 798 aa7.41□□□□□ -1.22
RAB5A-205ENST00000446547 IDH3AP50213 366 aa7.41□□□□□ -1.22
RAB5A-205ENST00000446547 PSMD2Q13200 908 aa7.41□□□□□ -1.22
RAB5A-205ENST00000446547 GRIN2CQ14957 1233 aa7.41□□□□□ -1.22
RAB5A-205ENST00000446547 C9orf131Q5VYM1 1079 aa7.41□□□□□ -1.22
RAB5A-205ENST00000446547 CD163Q86VB7 1156 aa7.41□□□□□ -1.22
RAB5A-205ENST00000446547 PIK3R5Q8WYR1 880 aa7.41□□□□□ -1.22
RAB5A-205ENST00000446547 CSRNP1Q96S65 589 aa7.41□□□□□ -1.22
RAB5A-205ENST00000446547 MRS2Q9HD23 443 aa7.41□□□□□ -1.22
RAB5A-205ENST00000446547 ZDHHC3Q9NYG2 299 aa7.41□□□□□ -1.22
RAB5A-205ENST00000446547 ATXN7L1Q9ULK2 861 aaPredicted RBP7.41□□□□□ -1.22
RAB5A-205ENST00000446547 CARMIL1Q5VZK9 1371 aa7.4□□□□□ -1.22
RAB5A-205ENST00000446547 POLR1AO95602 1720 aaPredicted RBP7.4□□□□□ -1.22
RAB5A-205ENST00000446547 C2CD2LO14523 706 aa7.4□□□□□ -1.22
RAB5A-205ENST00000446547 GNB5O14775 395 aa7.4□□□□□ -1.22
RAB5A-205ENST00000446547 RXRBP28702 533 aa7.4□□□□□ -1.22
RAB5A-205ENST00000446547 DAB2P98082 770 aa7.4□□□□□ -1.22
RAB5A-205ENST00000446547 ARSJQ5FYB0 599 aaPredicted RBP7.4□□□□□ -1.22
RAB5A-205ENST00000446547 LDLRAD1Q5T700 205 aa7.4□□□□□ -1.22
RAB5A-205ENST00000446547 TMEM87AQ8NBN3 555 aa7.4□□□□□ -1.22
RAB5A-205ENST00000446547 NEUROD4Q9HD90 331 aa7.4□□□□□ -1.22
RAB5A-205ENST00000446547 NDFIP2Q9NV92 336 aa7.4□□□□□ -1.22
RAB5A-205ENST00000446547 FAM13BQ9NYF5 915 aa7.4□□□□□ -1.22
RAB5A-205ENST00000446547 DMGDHQ9UI17 866 aaKnown RBP7.4□□□□□ -1.22
RAB5A-205ENST00000446547 DIP2CQ9Y2E4 1556 aa7.39□□□□□ -1.23
RAB5A-205ENST00000446547 EIF1AYO14602 144 aaKnown RBP7.39□□□□□ -1.23
RAB5A-205ENST00000446547 SORBS3O60504 671 aa7.39□□□□□ -1.23
RAB5A-205ENST00000446547 ATP4AP20648 1035 aa7.39□□□□□ -1.23
RAB5A-205ENST00000446547 FGD1P98174 961 aa7.39□□□□□ -1.23
RAB5A-205ENST00000446547 HIF1AQ16665 826 aa7.39□□□□□ -1.23
RAB5A-205ENST00000446547 ALG1LQ6GMV1 187 aa7.39□□□□□ -1.23
RAB5A-205ENST00000446547 LRRC69Q6ZNQ3 347 aa7.39□□□□□ -1.23
RAB5A-205ENST00000446547 TMC4Q7Z404 712 aa7.39□□□□□ -1.23
RAB5A-205ENST00000446547 CMTR1Q8N1G2 835 aaKnown RBP7.39□□□□□ -1.23
RAB5A-205ENST00000446547 ZIC5Q96T25 663 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms