RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 KCNQ5Q9NR82 932 aa21.72■■□□□ 1.07
SMARCAL1-209ENST00000444508 DDX19BQ9UMR2 479 aa21.72■■□□□ 1.07
SMARCAL1-209ENST00000444508 COG6Q9Y2V7 657 aa21.72■■□□□ 1.07
SMARCAL1-209ENST00000444508 PDE8BO95263 885 aa21.71■■□□□ 1.07
SMARCAL1-209ENST00000444508 SCNN1DP51172 638 aa21.71■■□□□ 1.07
SMARCAL1-209ENST00000444508 ZNF804AQ7Z570 1209 aa21.71■■□□□ 1.07
SMARCAL1-209ENST00000444508 RBM46Q8TBY0 533 aaKnown RBP21.71■■□□□ 1.07
SMARCAL1-209ENST00000444508 CHMP4BQ9H444 224 aaKnown RBP21.71■■□□□ 1.07
SMARCAL1-209ENST00000444508 TAF1DQ9H5J8 278 aaPredicted RBP21.71■■□□□ 1.07
SMARCAL1-209ENST00000444508 C1orf115Q9H7X2 142 aa21.71■■□□□ 1.07
SMARCAL1-209ENST00000444508 COPRSQ9NQ92 184 aa21.71■■□□□ 1.07
SMARCAL1-209ENST00000444508 PA2G4Q9UQ80 394 aaKnown RBP21.71■■□□□ 1.07
SMARCAL1-209ENST00000444508 SCN9AQ15858 1988 aa21.7■■□□□ 1.07
SMARCAL1-209ENST00000444508 EPHX2P34913 555 aa21.7■■□□□ 1.06
SMARCAL1-209ENST00000444508 USP17L3A6NCW0 530 aa21.69■■□□□ 1.06
SMARCAL1-209ENST00000444508 USP17L4A6NCW7 530 aa21.69■■□□□ 1.06
SMARCAL1-209ENST00000444508 RPS12P25398 132 aaKnown RBP21.69■■□□□ 1.06
SMARCAL1-209ENST00000444508 IL15P40933 162 aaPredicted RBP21.69■■□□□ 1.06
SMARCAL1-209ENST00000444508 USP17L1Q7RTZ2 530 aa21.69■■□□□ 1.06
SMARCAL1-209ENST00000444508 ATG9AQ7Z3C6 839 aa21.69■■□□□ 1.06
SMARCAL1-209ENST00000444508 PNMA8AQ86V59 439 aaPredicted RBP21.69■■□□□ 1.06
SMARCAL1-209ENST00000444508 VGLL2Q8N8G2 317 aa21.69■■□□□ 1.06
SMARCAL1-209ENST00000444508 GPRC5DQ9NZD1 345 aa21.69■■□□□ 1.06
SMARCAL1-209ENST00000444508 IRS2Q9Y4H2 1338 aa21.69■■□□□ 1.06
SMARCAL1-209ENST00000444508 PSME4Q14997 1843 aa21.69■■□□□ 1.06
SMARCAL1-209ENST00000444508 PNMA6EA0A0J9YXQ4 647 aa21.68■■□□□ 1.06
SMARCAL1-209ENST00000444508 VIL1P09327 827 aaKnown RBP21.68■■□□□ 1.06
SMARCAL1-209ENST00000444508 PUM3Q15397 648 aaKnown RBP21.68■■□□□ 1.06
SMARCAL1-209ENST00000444508 EAPPQ56P03 285 aaPredicted RBP21.68■■□□□ 1.06
SMARCAL1-209ENST00000444508 FBXW7Q969H0 707 aa21.68■■□□□ 1.06
SMARCAL1-209ENST00000444508 CEP126Q9P2H0 1117 aa21.68■■□□□ 1.06
SMARCAL1-209ENST00000444508 ZBTB12Q9Y330 459 aaPredicted RBP21.68■■□□□ 1.06
SMARCAL1-209ENST00000444508 EPS15P42566 896 aa21.67■■□□□ 1.06
SMARCAL1-209ENST00000444508 ATP8B2P98198 1209 aa21.67■■□□□ 1.06
SMARCAL1-209ENST00000444508 C20orf194Q5TEA3 1177 aa21.67■■□□□ 1.06
SMARCAL1-209ENST00000444508 SMC1BQ8NDV3 1235 aa21.67■■□□□ 1.06
SMARCAL1-209ENST00000444508 DPF2Q92785 391 aa21.67■■□□□ 1.06
SMARCAL1-209ENST00000444508 CD209Q9NNX6 404 aa21.67■■□□□ 1.06
SMARCAL1-209ENST00000444508 IFIT1P09914 478 aaKnown RBP21.66■■□□□ 1.06
SMARCAL1-209ENST00000444508 FSTL1Q12841 308 aa21.66■■□□□ 1.06
SMARCAL1-209ENST00000444508 RSBN1LQ6PCB5 846 aaPredicted RBP21.66■■□□□ 1.06
SMARCAL1-209ENST00000444508 ADARB2Q9NS39 739 aaKnown RBP21.66■■□□□ 1.06
SMARCAL1-209ENST00000444508 CNOT7Q9UIV1 285 aaKnown RBP21.66■■□□□ 1.06
SMARCAL1-209ENST00000444508 H7C1D1 291 aa21.65■■□□□ 1.06
SMARCAL1-209ENST00000444508 HIBADHP31937 336 aaKnown RBP21.65■■□□□ 1.06
SMARCAL1-209ENST00000444508 CAVIN4Q5BKX8 364 aa21.65■■□□□ 1.06
SMARCAL1-209ENST00000444508 STRIP1Q5VSL9 837 aa21.65■■□□□ 1.06
SMARCAL1-209ENST00000444508 LDHDQ86WU2 507 aa21.65■■□□□ 1.06
SMARCAL1-209ENST00000444508 VPS37DQ86XT2 251 aa21.65■■□□□ 1.06
SMARCAL1-209ENST00000444508 MICALL2Q8IY33 904 aa21.65■■□□□ 1.06
SMARCAL1-209ENST00000444508 AGBL3Q8NEM8 1001 aa21.65■■□□□ 1.06
SMARCAL1-209ENST00000444508 CLEC11AQ9Y240 323 aa21.65■■□□□ 1.06
SMARCAL1-209ENST00000444508 SLC5A1P13866 664 aa21.64■■□□□ 1.05
SMARCAL1-209ENST00000444508 IL1R1P14778 569 aa21.64■■□□□ 1.05
SMARCAL1-209ENST00000444508 GYG1P46976 350 aa21.64■■□□□ 1.05
SMARCAL1-209ENST00000444508 RRP1P56182 461 aaKnown RBP21.64■■□□□ 1.05
SMARCAL1-209ENST00000444508 G3BP1Q13283 466 aaKnown RBP eCLIP21.64■■□□□ 1.05
SMARCAL1-209ENST00000444508 POLA2Q14181 598 aa21.64■■□□□ 1.05
SMARCAL1-209ENST00000444508 TTLL5Q6EMB2 1281 aa21.64■■□□□ 1.05
SMARCAL1-209ENST00000444508 USP50Q70EL3 339 aaPredicted RBP21.64■■□□□ 1.05
SMARCAL1-209ENST00000444508 SSH3Q8TE77 659 aa21.64■■□□□ 1.05
SMARCAL1-209ENST00000444508 LPIN2Q92539 896 aa21.64■■□□□ 1.05
SMARCAL1-209ENST00000444508 FAM84BQ96KN1 310 aaPredicted RBP21.64■■□□□ 1.05
SMARCAL1-209ENST00000444508 ZNF609O15014 1411 aa21.63■■□□□ 1.05
SMARCAL1-209ENST00000444508 MYO3BQ8WXR4 1341 aa21.63■■□□□ 1.05
SMARCAL1-209ENST00000444508 POTEIP0CG38 1075 aa21.63■■□□□ 1.05
SMARCAL1-209ENST00000444508 POTEJP0CG39 1038 aa21.63■■□□□ 1.05
SMARCAL1-209ENST00000444508 FGFR2P21802 821 aa21.63■■□□□ 1.05
SMARCAL1-209ENST00000444508 GTF2IP78347 998 aa21.63■■□□□ 1.05
SMARCAL1-209ENST00000444508 ATP2B3Q16720 1220 aa21.63■■□□□ 1.05
SMARCAL1-209ENST00000444508 CHADLQ6NUI6 762 aa21.63■■□□□ 1.05
SMARCAL1-209ENST00000444508 CEP85Q6P2H3 762 aa21.63■■□□□ 1.05
SMARCAL1-209ENST00000444508 ZBTB40Q9NUA8 1239 aa21.63■■□□□ 1.05
SMARCAL1-209ENST00000444508 DACT2Q5SW24 774 aa21.62■■□□□ 1.05
SMARCAL1-209ENST00000444508 OS9Q13438 667 aaPredicted RBP21.61■■□□□ 1.05
SMARCAL1-209ENST00000444508 AKAP2Q9Y2D5 859 aa21.61■■□□□ 1.05
SMARCAL1-209ENST00000444508 SHTN1A0MZ66 631 aa21.6■■□□□ 1.05
SMARCAL1-209ENST00000444508 FRAT2O75474 233 aaPredicted RBP21.6■■□□□ 1.05
SMARCAL1-209ENST00000444508 SURF6O75683 361 aaKnown RBP21.6■■□□□ 1.05
SMARCAL1-209ENST00000444508 SASH1O94885 1247 aa21.6■■□□□ 1.05
SMARCAL1-209ENST00000444508 TFCP2Q12800 502 aa21.6■■□□□ 1.05
SMARCAL1-209ENST00000444508 FBXO33Q7Z6M2 555 aa21.6■■□□□ 1.05
SMARCAL1-209ENST00000444508 TDRD7Q8NHU6 1098 aaKnown RBP21.6■■□□□ 1.05
SMARCAL1-209ENST00000444508 ADAMTSL1Q8N6G6 1762 aa21.6■■□□□ 1.05
SMARCAL1-209ENST00000444508 ZNF646O15015 1829 aaPredicted RBP21.59■■□□□ 1.05
SMARCAL1-209ENST00000444508 USP17L8P0C7I0 530 aa21.59■■□□□ 1.05
SMARCAL1-209ENST00000444508 RPAP2Q8IXW5 612 aaPredicted RBP21.59■■□□□ 1.05
SMARCAL1-209ENST00000444508 GMLQ99445 158 aa21.59■■□□□ 1.05
SMARCAL1-209ENST00000444508 MXD3Q9BW11 206 aa21.59■■□□□ 1.05
SMARCAL1-209ENST00000444508 HMMRO75330 724 aa21.58■■□□□ 1.05
SMARCAL1-209ENST00000444508 BCAMP50895 628 aa21.58■■□□□ 1.05
SMARCAL1-209ENST00000444508 TBC1D10BQ4KMP7 808 aaPredicted RBP21.58■■□□□ 1.05
SMARCAL1-209ENST00000444508 SAMD7Q7Z3H4 446 aa21.58■■□□□ 1.05
SMARCAL1-209ENST00000444508 OGFOD1Q8N543 542 aa21.58■■□□□ 1.05
SMARCAL1-209ENST00000444508 TRPM4Q8TD43 1214 aa21.58■■□□□ 1.05
SMARCAL1-209ENST00000444508 RBM26Q5T8P6 1007 aaKnown RBP21.57■■□□□ 1.04
SMARCAL1-209ENST00000444508 JAG2Q9Y219 1238 aa21.57■■□□□ 1.04
SMARCAL1-209ENST00000444508 NOP58Q9Y2X3 529 aaKnown RBP21.57■■□□□ 1.04
SMARCAL1-209ENST00000444508 FAM205AQ6ZU69 1335 aa21.56■■□□□ 1.04
SMARCAL1-209ENST00000444508 MMP14P50281 582 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms