RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 TXNRD3Q86VQ6 643 aa18.72■□□□□ 0.59
CSNK1E-210ENST00000442216 HACL1Q9UJ83 578 aa18.72■□□□□ 0.59
CSNK1E-210ENST00000442216 ZNF609O15014 1411 aa18.72■□□□□ 0.59
CSNK1E-210ENST00000442216 LMOD1P29536 600 aaPredicted RBP18.71■□□□□ 0.59
CSNK1E-210ENST00000442216 IL15P40933 162 aaPredicted RBP18.71■□□□□ 0.59
CSNK1E-210ENST00000442216 ATP8B2P98198 1209 aa18.71■□□□□ 0.59
CSNK1E-210ENST00000442216 ATG9AQ7Z3C6 839 aa18.71■□□□□ 0.59
CSNK1E-210ENST00000442216 RBM46Q8TBY0 533 aaKnown RBP18.71■□□□□ 0.59
CSNK1E-210ENST00000442216 COG6Q9Y2V7 657 aa18.71■□□□□ 0.59
CSNK1E-210ENST00000442216 PSMD14O00487 310 aa18.7■□□□□ 0.58
CSNK1E-210ENST00000442216 VIL1P09327 827 aaKnown RBP18.7■□□□□ 0.58
CSNK1E-210ENST00000442216 RPS12P25398 132 aaKnown RBP18.7■□□□□ 0.58
CSNK1E-210ENST00000442216 SCNN1DP51172 638 aa18.7■□□□□ 0.58
CSNK1E-210ENST00000442216 ZNF804AQ7Z570 1209 aa18.7■□□□□ 0.58
CSNK1E-210ENST00000442216 DPF2Q92785 391 aa18.7■□□□□ 0.58
CSNK1E-210ENST00000442216 TAF1DQ9H5J8 278 aaPredicted RBP18.7■□□□□ 0.58
CSNK1E-210ENST00000442216 SNAP23O00161 211 aa18.69■□□□□ 0.58
CSNK1E-210ENST00000442216 KLRK1P26718 216 aa18.69■□□□□ 0.58
CSNK1E-210ENST00000442216 POLA2Q14181 598 aa18.69■□□□□ 0.58
CSNK1E-210ENST00000442216 PNMA8AQ86V59 439 aaPredicted RBP18.69■□□□□ 0.58
CSNK1E-210ENST00000442216 SSH3Q8TE77 659 aa18.69■□□□□ 0.58
CSNK1E-210ENST00000442216 CD209Q9NNX6 404 aa18.69■□□□□ 0.58
CSNK1E-210ENST00000442216 GPRC5DQ9NZD1 345 aa18.69■□□□□ 0.58
CSNK1E-210ENST00000442216 ADAMTSL1Q8N6G6 1762 aa18.68■□□□□ 0.58
CSNK1E-210ENST00000442216 PNMA6EA0A0J9YXQ4 647 aa18.68■□□□□ 0.58
CSNK1E-210ENST00000442216 USP17L3A6NCW0 530 aa18.68■□□□□ 0.58
CSNK1E-210ENST00000442216 USP17L4A6NCW7 530 aa18.68■□□□□ 0.58
CSNK1E-210ENST00000442216 IL1R1P14778 569 aa18.68■□□□□ 0.58
CSNK1E-210ENST00000442216 FGFR2P21802 821 aa18.68■□□□□ 0.58
CSNK1E-210ENST00000442216 EPHX2P34913 555 aa18.68■□□□□ 0.58
CSNK1E-210ENST00000442216 GMPSP49915 693 aaPredicted RBP18.68■□□□□ 0.58
CSNK1E-210ENST00000442216 C1QTNF8P60827 252 aa18.68■□□□□ 0.58
CSNK1E-210ENST00000442216 PUM3Q15397 648 aaKnown RBP18.68■□□□□ 0.58
CSNK1E-210ENST00000442216 USP17L1Q7RTZ2 530 aa18.68■□□□□ 0.58
CSNK1E-210ENST00000442216 SIL1Q9H173 461 aa18.68■□□□□ 0.58
CSNK1E-210ENST00000442216 KCNQ5Q9NR82 932 aa18.68■□□□□ 0.58
CSNK1E-210ENST00000442216 ZBTB40Q9NUA8 1239 aa18.68■□□□□ 0.58
CSNK1E-210ENST00000442216 CEP126Q9P2H0 1117 aa18.68■□□□□ 0.58
CSNK1E-210ENST00000442216 PA2G4Q9UQ80 394 aaKnown RBP18.68■□□□□ 0.58
CSNK1E-210ENST00000442216 MYH13Q9UKX3 1938 aa18.68■□□□□ 0.58
CSNK1E-210ENST00000442216 ARAP2Q8WZ64 1704 aa18.67■□□□□ 0.58
CSNK1E-210ENST00000442216 FSTL1Q12841 308 aa18.67■□□□□ 0.58
CSNK1E-210ENST00000442216 STRIP1Q5VSL9 837 aa18.67■□□□□ 0.58
CSNK1E-210ENST00000442216 AGBL3Q8NEM8 1001 aa18.67■□□□□ 0.58
CSNK1E-210ENST00000442216 IFIT1P09914 478 aaKnown RBP18.66■□□□□ 0.58
CSNK1E-210ENST00000442216 EPS15P42566 896 aa18.66■□□□□ 0.58
CSNK1E-210ENST00000442216 RRP1P56182 461 aaKnown RBP18.66■□□□□ 0.58
CSNK1E-210ENST00000442216 C20orf194Q5TEA3 1177 aa18.66■□□□□ 0.58
CSNK1E-210ENST00000442216 CEP85Q6P2H3 762 aa18.66■□□□□ 0.58
CSNK1E-210ENST00000442216 RSBN1LQ6PCB5 846 aaPredicted RBP18.66■□□□□ 0.58
CSNK1E-210ENST00000442216 SMC1BQ8NDV3 1235 aa18.66■□□□□ 0.58
CSNK1E-210ENST00000442216 LPIN2Q92539 896 aa18.66■□□□□ 0.58
CSNK1E-210ENST00000442216 C1orf115Q9H7X2 142 aa18.66■□□□□ 0.58
CSNK1E-210ENST00000442216 ADARB2Q9NS39 739 aaKnown RBP18.66■□□□□ 0.58
CSNK1E-210ENST00000442216 MYO3BQ8WXR4 1341 aa18.66■□□□□ 0.58
CSNK1E-210ENST00000442216 HIBADHP31937 336 aaKnown RBP18.65■□□□□ 0.58
CSNK1E-210ENST00000442216 MMP14P50281 582 aa18.65■□□□□ 0.58
CSNK1E-210ENST00000442216 CAVIN4Q5BKX8 364 aa18.65■□□□□ 0.58
CSNK1E-210ENST00000442216 USP50Q70EL3 339 aaPredicted RBP18.65■□□□□ 0.58
CSNK1E-210ENST00000442216 LDHDQ86WU2 507 aa18.65■□□□□ 0.58
CSNK1E-210ENST00000442216 RPAP2Q8IXW5 612 aaPredicted RBP18.65■□□□□ 0.58
CSNK1E-210ENST00000442216 FAM84BQ96KN1 310 aaPredicted RBP18.65■□□□□ 0.58
CSNK1E-210ENST00000442216 CNOT7Q9UIV1 285 aaKnown RBP18.65■□□□□ 0.58
CSNK1E-210ENST00000442216 H7C1D1 291 aa18.64■□□□□ 0.57
CSNK1E-210ENST00000442216 SLC5A1P13866 664 aa18.64■□□□□ 0.57
CSNK1E-210ENST00000442216 G3BP1Q13283 466 aaKnown RBP eCLIP18.64■□□□□ 0.57
CSNK1E-210ENST00000442216 DACT2Q5SW24 774 aa18.64■□□□□ 0.57
CSNK1E-210ENST00000442216 TTLL5Q6EMB2 1281 aa18.64■□□□□ 0.57
CSNK1E-210ENST00000442216 FBXO33Q7Z6M2 555 aa18.64■□□□□ 0.57
CSNK1E-210ENST00000442216 TDRD7Q8NHU6 1098 aaKnown RBP18.64■□□□□ 0.57
CSNK1E-210ENST00000442216 GMLQ99445 158 aa18.64■□□□□ 0.57
CSNK1E-210ENST00000442216 ZBTB12Q9Y330 459 aaPredicted RBP18.64■□□□□ 0.57
CSNK1E-210ENST00000442216 SASH1O94885 1247 aa18.63■□□□□ 0.57
CSNK1E-210ENST00000442216 FKBP1AP62942 108 aaKnown RBP18.63■□□□□ 0.57
CSNK1E-210ENST00000442216 MICALL2Q8IY33 904 aa18.63■□□□□ 0.57
CSNK1E-210ENST00000442216 AKAP2Q9Y2D5 859 aa18.63■□□□□ 0.57
CSNK1E-210ENST00000442216 NOP58Q9Y2X3 529 aaKnown RBP18.63■□□□□ 0.57
CSNK1E-210ENST00000442216 ZBTB22O15209 634 aa18.62■□□□□ 0.57
CSNK1E-210ENST00000442216 GYG1P46976 350 aa18.62■□□□□ 0.57
CSNK1E-210ENST00000442216 GTF2IP78347 998 aa18.62■□□□□ 0.57
CSNK1E-210ENST00000442216 ATP2B3Q16720 1220 aa18.62■□□□□ 0.57
CSNK1E-210ENST00000442216 CHADLQ6NUI6 762 aa18.62■□□□□ 0.57
CSNK1E-210ENST00000442216 VPS37DQ86XT2 251 aa18.62■□□□□ 0.57
CSNK1E-210ENST00000442216 FAM205AQ6ZU69 1335 aa18.61■□□□□ 0.57
CSNK1E-210ENST00000442216 EAPPQ56P03 285 aaPredicted RBP18.61■□□□□ 0.57
CSNK1E-210ENST00000442216 HMMRO75330 724 aa18.6■□□□□ 0.57
CSNK1E-210ENST00000442216 SURF6O75683 361 aaKnown RBP18.6■□□□□ 0.57
CSNK1E-210ENST00000442216 POTEIP0CG38 1075 aa18.6■□□□□ 0.57
CSNK1E-210ENST00000442216 POTEJP0CG39 1038 aa18.6■□□□□ 0.57
CSNK1E-210ENST00000442216 ZNF280AP59817 542 aaPredicted RBP18.6■□□□□ 0.57
CSNK1E-210ENST00000442216 TFCP2Q12800 502 aa18.6■□□□□ 0.57
CSNK1E-210ENST00000442216 ZC3H15Q8WU90 426 aaKnown RBP18.6■□□□□ 0.57
CSNK1E-210ENST00000442216 FBXW7Q969H0 707 aa18.6■□□□□ 0.57
CSNK1E-210ENST00000442216 POLR2AP24928 1970 aaKnown RBP18.6■□□□□ 0.57
CSNK1E-210ENST00000442216 USP17L8P0C7I0 530 aa18.59■□□□□ 0.57
CSNK1E-210ENST00000442216 GPR108Q9NPR9 543 aa18.59■□□□□ 0.57
CSNK1E-210ENST00000442216 PGAP2Q9UHJ9 254 aa18.59■□□□□ 0.57
CSNK1E-210ENST00000442216 BCAMP50895 628 aa18.58■□□□□ 0.56
CSNK1E-210ENST00000442216 HSP90AB4PQ58FF6 505 aa18.58■□□□□ 0.56
CSNK1E-210ENST00000442216 OGFOD1Q8N543 542 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms