RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 NSFL1CQ9UNZ2 370 aaKnown RBP8.77□□□□□ -1.01
ERCC8-203ENST00000439176 PCNTO95613 3336 aa8.77□□□□□ -1.01
ERCC8-203ENST00000439176 CDHR2Q9BYE9 1310 aa8.77□□□□□ -1.01
ERCC8-203ENST00000439176 RASSF10A6NK89 507 aa8.76□□□□□ -1.01
ERCC8-203ENST00000439176 H7C1D1 291 aa8.76□□□□□ -1.01
ERCC8-203ENST00000439176 IRS4O14654 1257 aaPredicted RBP8.76□□□□□ -1.01
ERCC8-203ENST00000439176 CTCFP49711 727 aaPredicted RBP8.76□□□□□ -1.01
ERCC8-203ENST00000439176 MAP2K1Q02750 393 aaPredicted RBP8.76□□□□□ -1.01
ERCC8-203ENST00000439176 TRIM28Q13263 835 aaKnown RBP8.76□□□□□ -1.01
ERCC8-203ENST00000439176 SF3B3Q15393 1217 aaKnown RBP8.76□□□□□ -1.01
ERCC8-203ENST00000439176 WASHC4Q2M389 1173 aa8.76□□□□□ -1.01
ERCC8-203ENST00000439176 CCDC30Q5VVM6 783 aa8.76□□□□□ -1.01
ERCC8-203ENST00000439176 ZC3H15Q8WU90 426 aaKnown RBP8.76□□□□□ -1.01
ERCC8-203ENST00000439176 DDX27Q96GQ7 796 aaKnown RBP8.76□□□□□ -1.01
ERCC8-203ENST00000439176 C6orf229H3BNL8 230 aa8.75□□□□□ -1.01
ERCC8-203ENST00000439176 ELL2O00472 640 aaPredicted RBP8.75□□□□□ -1.01
ERCC8-203ENST00000439176 RAD17O75943 681 aa8.75□□□□□ -1.01
ERCC8-203ENST00000439176 ZNF853P0CG23 659 aa8.75□□□□□ -1.01
ERCC8-203ENST00000439176 GMPSP49915 693 aaPredicted RBP8.75□□□□□ -1.01
ERCC8-203ENST00000439176 RPS8P62241 208 aaKnown RBP8.75□□□□□ -1.01
ERCC8-203ENST00000439176 CAMK2BQ13554 666 aa8.75□□□□□ -1.01
ERCC8-203ENST00000439176 RTL5Q5HYW3 569 aaPredicted RBP8.75□□□□□ -1.01
ERCC8-203ENST00000439176 ZBTB38Q8NAP3 1195 aaPredicted RBP8.75□□□□□ -1.01
ERCC8-203ENST00000439176 OXER1Q8TDS5 423 aa8.75□□□□□ -1.01
ERCC8-203ENST00000439176 PRDM10Q9NQV6 1147 aa8.75□□□□□ -1.01
ERCC8-203ENST00000439176 TSHZ2Q9NRE2 1034 aa8.75□□□□□ -1.01
ERCC8-203ENST00000439176 ANKRD36CQ5JPF3 1778 aa8.75□□□□□ -1.01
ERCC8-203ENST00000439176 WDR33Q9C0J8 1336 aaKnown RBP8.75□□□□□ -1.01
ERCC8-203ENST00000439176 CCDC152Q4G0S7 254 aa8.74□□□□□ -1.01
ERCC8-203ENST00000439176 CDC37L1Q7L3B6 337 aa8.74□□□□□ -1.01
ERCC8-203ENST00000439176 CCDC191Q8NCU4 936 aa8.74□□□□□ -1.01
ERCC8-203ENST00000439176 CELF1Q92879 486 aaKnown RBP8.74□□□□□ -1.01
ERCC8-203ENST00000439176 KHSRPQ92945 711 aaKnown RBP eCLIP8.74□□□□□ -1.01
ERCC8-203ENST00000439176 ZNF428Q96B54 188 aa8.74□□□□□ -1.01
ERCC8-203ENST00000439176 STK31Q9BXU1 1019 aa8.74□□□□□ -1.01
ERCC8-203ENST00000439176 ZC3H12CQ9C0D7 883 aaKnown RBP8.74□□□□□ -1.01
ERCC8-203ENST00000439176 CWC25Q9NXE8 425 aaPredicted RBP8.74□□□□□ -1.01
ERCC8-203ENST00000439176 ANKIB1Q9P2G1 1089 aa8.74□□□□□ -1.01
ERCC8-203ENST00000439176 CNOT7Q9UIV1 285 aaKnown RBP8.74□□□□□ -1.01
ERCC8-203ENST00000439176 ADAMTSL1Q8N6G6 1762 aa8.73□□□□□ -1.01
ERCC8-203ENST00000439176 COL4A5P29400 1685 aa8.73□□□□□ -1.01
ERCC8-203ENST00000439176 FOXN1O15353 648 aa8.73□□□□□ -1.01
ERCC8-203ENST00000439176 CELF2O95319 508 aaKnown RBP8.73□□□□□ -1.01
ERCC8-203ENST00000439176 RPS12P25398 132 aaKnown RBP8.73□□□□□ -1.01
ERCC8-203ENST00000439176 PBX2P40425 430 aa8.73□□□□□ -1.01
ERCC8-203ENST00000439176 NEXNQ0ZGT2 675 aa8.73□□□□□ -1.01
ERCC8-203ENST00000439176 GRM1Q13255 1194 aa8.73□□□□□ -1.01
ERCC8-203ENST00000439176 DPF2Q92785 391 aa8.73□□□□□ -1.01
ERCC8-203ENST00000439176 GPR101Q96P66 508 aaPredicted RBP8.73□□□□□ -1.01
ERCC8-203ENST00000439176 MYD88Q99836 296 aa8.73□□□□□ -1.01
ERCC8-203ENST00000439176 WBP1LQ9NX94 342 aa8.73□□□□□ -1.01
ERCC8-203ENST00000439176 PCDHGA4Q9Y5G9 962 aa8.73□□□□□ -1.01
ERCC8-203ENST00000439176 TRAF5O00463 557 aa8.72□□□□□ -1.01
ERCC8-203ENST00000439176 PDE8AO60658 829 aa8.72□□□□□ -1.01
ERCC8-203ENST00000439176 PCCAP05165 728 aaPredicted RBP8.72□□□□□ -1.01
ERCC8-203ENST00000439176 MAP2K2P36507 400 aa8.72□□□□□ -1.01
ERCC8-203ENST00000439176 GPSM2P81274 684 aa8.72□□□□□ -1.01
ERCC8-203ENST00000439176 SLC51AQ86UW1 340 aa8.72□□□□□ -1.01
ERCC8-203ENST00000439176 CAPNS2Q96L46 248 aa8.72□□□□□ -1.01
ERCC8-203ENST00000439176 METTL22Q9BUU2 404 aaPredicted RBP8.72□□□□□ -1.01
ERCC8-203ENST00000439176 PHAXQ9H814 394 aaKnown RBP8.72□□□□□ -1.01
ERCC8-203ENST00000439176 DBNDD1Q9H9R9 158 aa8.72□□□□□ -1.01
ERCC8-203ENST00000439176 PGAP2Q9UHJ9 254 aa8.72□□□□□ -1.01
ERCC8-203ENST00000439176 GGA1Q9UJY5 639 aa8.72□□□□□ -1.01
ERCC8-203ENST00000439176 TLL2Q9Y6L7 1015 aa8.72□□□□□ -1.01
ERCC8-203ENST00000439176 YDJCA8MPS7 323 aa8.71□□□□□ -1.02
ERCC8-203ENST00000439176 PSMD14O00487 310 aa8.71□□□□□ -1.02
ERCC8-203ENST00000439176 ECE2O60344 883 aa8.71□□□□□ -1.02
ERCC8-203ENST00000439176 UFL1O94874 794 aa8.71□□□□□ -1.02
ERCC8-203ENST00000439176 ZEB1P37275 1124 aaPredicted RBP8.71□□□□□ -1.02
ERCC8-203ENST00000439176 LBX1P52954 281 aa8.71□□□□□ -1.02
ERCC8-203ENST00000439176 CST9Q5W186 159 aa8.71□□□□□ -1.02
ERCC8-203ENST00000439176 KSR2Q6VAB6 950 aa8.71□□□□□ -1.02
ERCC8-203ENST00000439176 ANKRD18AQ8IVF6 992 aa8.71□□□□□ -1.02
ERCC8-203ENST00000439176 C8orf58Q8NAV2 365 aa8.71□□□□□ -1.02
ERCC8-203ENST00000439176 TBC1D16Q8TBP0 767 aa8.71□□□□□ -1.02
ERCC8-203ENST00000439176 DCPSQ96C86 337 aaKnown RBP8.71□□□□□ -1.02
ERCC8-203ENST00000439176 HHIPL1Q96JK4 782 aa8.71□□□□□ -1.02
ERCC8-203ENST00000439176 CDC5LQ99459 802 aaKnown RBP8.71□□□□□ -1.02
ERCC8-203ENST00000439176 ZNF408Q9H9D4 720 aa8.71□□□□□ -1.02
ERCC8-203ENST00000439176 PODXL2Q9NZ53 605 aa8.71□□□□□ -1.02
ERCC8-203ENST00000439176 POLLQ9UGP5 575 aa8.71□□□□□ -1.02
ERCC8-203ENST00000439176 LAMB2P55268 1798 aa8.71□□□□□ -1.02
ERCC8-203ENST00000439176 CA12O43570 354 aa8.7□□□□□ -1.02
ERCC8-203ENST00000439176 CCDC27Q2M243 656 aa8.7□□□□□ -1.02
ERCC8-203ENST00000439176 CYP4F22Q6NT55 531 aa8.7□□□□□ -1.02
ERCC8-203ENST00000439176 SAPCD2Q86UD0 394 aa8.7□□□□□ -1.02
ERCC8-203ENST00000439176 GLIS2Q9BZE0 524 aaPredicted RBP8.7□□□□□ -1.02
ERCC8-203ENST00000439176 MAP3K2Q9Y2U5 619 aa8.7□□□□□ -1.02
ERCC8-203ENST00000439176 LTBP1Q14766 1721 aa8.7□□□□□ -1.02
ERCC8-203ENST00000439176 PI4KAP2A4QPH2 592 aa8.69□□□□□ -1.02
ERCC8-203ENST00000439176 ANP32CO43423 234 aa8.69□□□□□ -1.02
ERCC8-203ENST00000439176 ATP2B4P23634 1241 aa8.69□□□□□ -1.02
ERCC8-203ENST00000439176 HIRAP54198 1017 aaPredicted RBP8.69□□□□□ -1.02
ERCC8-203ENST00000439176 FMR1Q06787 632 aaKnown RBP eCLIP8.69□□□□□ -1.02
ERCC8-203ENST00000439176 TWISTNBQ3B726 338 aaPredicted RBP8.69□□□□□ -1.02
ERCC8-203ENST00000439176 TBC1D10BQ4KMP7 808 aaPredicted RBP8.69□□□□□ -1.02
ERCC8-203ENST00000439176 RBM26Q5T8P6 1007 aaKnown RBP8.69□□□□□ -1.02
ERCC8-203ENST00000439176 SAMD7Q7Z3H4 446 aa8.69□□□□□ -1.02
ERCC8-203ENST00000439176 KRT26Q7Z3Y9 468 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms