RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 CIAO1O76071 339 aa20.37■□□□□ 0.85
CTSD-205ENST00000438213 PDE8BO95263 885 aa20.37■□□□□ 0.85
CTSD-205ENST00000438213 VIL1P09327 827 aaKnown RBP20.37■□□□□ 0.85
CTSD-205ENST00000438213 RPS12P25398 132 aaKnown RBP20.37■□□□□ 0.85
CTSD-205ENST00000438213 GMPSP49915 693 aaPredicted RBP20.37■□□□□ 0.85
CTSD-205ENST00000438213 ZNF804AQ7Z570 1209 aa20.37■□□□□ 0.85
CTSD-205ENST00000438213 DPF2Q92785 391 aa20.37■□□□□ 0.85
CTSD-205ENST00000438213 DDX19BQ9UMR2 479 aa20.37■□□□□ 0.85
CTSD-205ENST00000438213 USP17L3A6NCW0 530 aa20.36■□□□□ 0.85
CTSD-205ENST00000438213 USP17L4A6NCW7 530 aa20.36■□□□□ 0.85
CTSD-205ENST00000438213 H7C1D1 291 aa20.36■□□□□ 0.85
CTSD-205ENST00000438213 SCNN1DP51172 638 aa20.36■□□□□ 0.85
CTSD-205ENST00000438213 FSTL1Q12841 308 aa20.36■□□□□ 0.85
CTSD-205ENST00000438213 MVPQ14764 893 aaKnown RBP20.36■□□□□ 0.85
CTSD-205ENST00000438213 USP17L1Q7RTZ2 530 aa20.36■□□□□ 0.85
CTSD-205ENST00000438213 SMC1BQ8NDV3 1235 aa20.36■□□□□ 0.85
CTSD-205ENST00000438213 SIL1Q9H173 461 aa20.36■□□□□ 0.85
CTSD-205ENST00000438213 GPRC5DQ9NZD1 345 aa20.36■□□□□ 0.85
CTSD-205ENST00000438213 CEP126Q9P2H0 1117 aa20.36■□□□□ 0.85
CTSD-205ENST00000438213 IL15P40933 162 aaPredicted RBP20.35■□□□□ 0.85
CTSD-205ENST00000438213 EPS15P42566 896 aa20.35■□□□□ 0.85
CTSD-205ENST00000438213 ATP8B2P98198 1209 aa20.35■□□□□ 0.85
CTSD-205ENST00000438213 EAPPQ56P03 285 aaPredicted RBP20.35■□□□□ 0.85
CTSD-205ENST00000438213 ATG9AQ7Z3C6 839 aa20.35■□□□□ 0.85
CTSD-205ENST00000438213 CD209Q9NNX6 404 aa20.35■□□□□ 0.85
CTSD-205ENST00000438213 CNOT7Q9UIV1 285 aaKnown RBP20.35■□□□□ 0.85
CTSD-205ENST00000438213 COG6Q9Y2V7 657 aa20.35■□□□□ 0.85
CTSD-205ENST00000438213 SCN4AP35499 1836 aa20.34■□□□□ 0.85
CTSD-205ENST00000438213 KLRK1P26718 216 aa20.34■□□□□ 0.85
CTSD-205ENST00000438213 VGLL2Q8N8G2 317 aa20.34■□□□□ 0.85
CTSD-205ENST00000438213 PA2G4Q9UQ80 394 aaKnown RBP20.34■□□□□ 0.85
CTSD-205ENST00000438213 CLEC11AQ9Y240 323 aa20.34■□□□□ 0.85
CTSD-205ENST00000438213 ZBTB12Q9Y330 459 aaPredicted RBP20.34■□□□□ 0.85
CTSD-205ENST00000438213 IFIT1P09914 478 aaKnown RBP20.33■□□□□ 0.85
CTSD-205ENST00000438213 HIBADHP31937 336 aaKnown RBP20.33■□□□□ 0.85
CTSD-205ENST00000438213 PUM3Q15397 648 aaKnown RBP20.33■□□□□ 0.85
CTSD-205ENST00000438213 CAVIN4Q5BKX8 364 aa20.33■□□□□ 0.85
CTSD-205ENST00000438213 STRIP1Q5VSL9 837 aa20.33■□□□□ 0.85
CTSD-205ENST00000438213 TTLL5Q6EMB2 1281 aa20.33■□□□□ 0.85
CTSD-205ENST00000438213 RSBN1LQ6PCB5 846 aaPredicted RBP20.33■□□□□ 0.85
CTSD-205ENST00000438213 USP50Q70EL3 339 aaPredicted RBP20.33■□□□□ 0.85
CTSD-205ENST00000438213 LDHDQ86WU2 507 aa20.33■□□□□ 0.85
CTSD-205ENST00000438213 VPS37DQ86XT2 251 aa20.33■□□□□ 0.85
CTSD-205ENST00000438213 AGBL3Q8NEM8 1001 aa20.33■□□□□ 0.85
CTSD-205ENST00000438213 ADARB2Q9NS39 739 aaKnown RBP20.33■□□□□ 0.85
CTSD-205ENST00000438213 IRS2Q9Y4H2 1338 aa20.32■□□□□ 0.84
CTSD-205ENST00000438213 PNMA6EA0A0J9YXQ4 647 aa20.32■□□□□ 0.84
CTSD-205ENST00000438213 G3BP1Q13283 466 aaKnown RBP eCLIP20.32■□□□□ 0.84
CTSD-205ENST00000438213 FBXW7Q969H0 707 aa20.32■□□□□ 0.84
CTSD-205ENST00000438213 C1orf115Q9H7X2 142 aa20.32■□□□□ 0.84
CTSD-205ENST00000438213 SLC5A1P13866 664 aa20.31■□□□□ 0.84
CTSD-205ENST00000438213 IL1R1P14778 569 aa20.31■□□□□ 0.84
CTSD-205ENST00000438213 CHADLQ6NUI6 762 aa20.31■□□□□ 0.84
CTSD-205ENST00000438213 MICALL2Q8IY33 904 aa20.31■□□□□ 0.84
CTSD-205ENST00000438213 LPIN2Q92539 896 aa20.31■□□□□ 0.84
CTSD-205ENST00000438213 FAM84BQ96KN1 310 aaPredicted RBP20.31■□□□□ 0.84
CTSD-205ENST00000438213 FGFR2P21802 821 aa20.3■□□□□ 0.84
CTSD-205ENST00000438213 GYG1P46976 350 aa20.3■□□□□ 0.84
CTSD-205ENST00000438213 GTF2IP78347 998 aa20.3■□□□□ 0.84
CTSD-205ENST00000438213 POLA2Q14181 598 aa20.3■□□□□ 0.84
CTSD-205ENST00000438213 FBXO33Q7Z6M2 555 aa20.3■□□□□ 0.84
CTSD-205ENST00000438213 SSH3Q8TE77 659 aa20.3■□□□□ 0.84
CTSD-205ENST00000438213 MYO3BQ8WXR4 1341 aa20.29■□□□□ 0.84
CTSD-205ENST00000438213 SASH1O94885 1247 aa20.29■□□□□ 0.84
CTSD-205ENST00000438213 MMP14P50281 582 aa20.29■□□□□ 0.84
CTSD-205ENST00000438213 DACT2Q5SW24 774 aa20.29■□□□□ 0.84
CTSD-205ENST00000438213 ZBTB40Q9NUA8 1239 aa20.29■□□□□ 0.84
CTSD-205ENST00000438213 AKAP2Q9Y2D5 859 aa20.29■□□□□ 0.84
CTSD-205ENST00000438213 POTEIP0CG38 1075 aa20.28■□□□□ 0.84
CTSD-205ENST00000438213 POTEJP0CG39 1038 aa20.28■□□□□ 0.84
CTSD-205ENST00000438213 C20orf194Q5TEA3 1177 aa20.28■□□□□ 0.84
CTSD-205ENST00000438213 TDRD7Q8NHU6 1098 aaKnown RBP20.28■□□□□ 0.84
CTSD-205ENST00000438213 FRAT2O75474 233 aaPredicted RBP20.27■□□□□ 0.84
CTSD-205ENST00000438213 USP17L8P0C7I0 530 aa20.27■□□□□ 0.84
CTSD-205ENST00000438213 ATP2B3Q16720 1220 aa20.27■□□□□ 0.84
CTSD-205ENST00000438213 CEP85Q6P2H3 762 aa20.27■□□□□ 0.84
CTSD-205ENST00000438213 RPAP2Q8IXW5 612 aaPredicted RBP20.27■□□□□ 0.84
CTSD-205ENST00000438213 OGFOD1Q8N543 542 aa20.27■□□□□ 0.84
CTSD-205ENST00000438213 GMLQ99445 158 aa20.27■□□□□ 0.84
CTSD-205ENST00000438213 SURF6O75683 361 aaKnown RBP20.26■□□□□ 0.83
CTSD-205ENST00000438213 BCAMP50895 628 aa20.26■□□□□ 0.83
CTSD-205ENST00000438213 RRP1P56182 461 aaKnown RBP20.26■□□□□ 0.83
CTSD-205ENST00000438213 OS9Q13438 667 aaPredicted RBP20.26■□□□□ 0.83
CTSD-205ENST00000438213 ZC3H15Q8WU90 426 aaKnown RBP20.26■□□□□ 0.83
CTSD-205ENST00000438213 SCN9AQ15858 1988 aa20.26■□□□□ 0.83
CTSD-205ENST00000438213 HMMRO75330 724 aa20.25■□□□□ 0.83
CTSD-205ENST00000438213 HSPA6P17066 643 aa20.25■□□□□ 0.83
CTSD-205ENST00000438213 ZNF280AP59817 542 aaPredicted RBP20.25■□□□□ 0.83
CTSD-205ENST00000438213 FKBP1AP62942 108 aaKnown RBP20.25■□□□□ 0.83
CTSD-205ENST00000438213 TFCP2Q12800 502 aa20.25■□□□□ 0.83
CTSD-205ENST00000438213 RBM26Q5T8P6 1007 aaKnown RBP20.25■□□□□ 0.83
CTSD-205ENST00000438213 SAMD7Q7Z3H4 446 aa20.25■□□□□ 0.83
CTSD-205ENST00000438213 GNL3LQ9NVN8 582 aaKnown RBP20.25■□□□□ 0.83
CTSD-205ENST00000438213 HDAC9Q9UKV0 1011 aa20.25■□□□□ 0.83
CTSD-205ENST00000438213 ZNF609O15014 1411 aa20.25■□□□□ 0.83
CTSD-205ENST00000438213 SHTN1A0MZ66 631 aa20.24■□□□□ 0.83
CTSD-205ENST00000438213 TBC1D10BQ4KMP7 808 aaPredicted RBP20.24■□□□□ 0.83
CTSD-205ENST00000438213 CNTROBQ8N137 903 aa20.24■□□□□ 0.83
CTSD-205ENST00000438213 MXD3Q9BW11 206 aa20.24■□□□□ 0.83
CTSD-205ENST00000438213 NOP58Q9Y2X3 529 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms