RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 TOMM70O94826 608 aa22.92■■□□□ 1.26
HLA-F-220ENST00000434407 SCNN1DP51172 638 aa22.92■■□□□ 1.26
HLA-F-220ENST00000434407 MVPQ14764 893 aaKnown RBP22.92■■□□□ 1.26
HLA-F-220ENST00000434407 ATG9AQ7Z3C6 839 aa22.92■■□□□ 1.26
HLA-F-220ENST00000434407 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.92■■□□□ 1.26
HLA-F-220ENST00000434407 COA1Q9GZY4 146 aa22.92■■□□□ 1.26
HLA-F-220ENST00000434407 PSMD14O00487 310 aa22.91■■□□□ 1.26
HLA-F-220ENST00000434407 KCNJ4P48050 445 aa22.91■■□□□ 1.26
HLA-F-220ENST00000434407 TAF1DQ9H5J8 278 aaPredicted RBP22.91■■□□□ 1.26
HLA-F-220ENST00000434407 SRGAP3O43295 1099 aa22.9■■□□□ 1.26
HLA-F-220ENST00000434407 PDE8BO95263 885 aa22.9■■□□□ 1.26
HLA-F-220ENST00000434407 VIL1P09327 827 aaKnown RBP22.9■■□□□ 1.26
HLA-F-220ENST00000434407 RBM46Q8TBY0 533 aaKnown RBP22.9■■□□□ 1.26
HLA-F-220ENST00000434407 HACL1Q9UJ83 578 aa22.9■■□□□ 1.26
HLA-F-220ENST00000434407 ZNF609O15014 1411 aa22.9■■□□□ 1.26
HLA-F-220ENST00000434407 G3V3G9 751 aa22.89■■□□□ 1.25
HLA-F-220ENST00000434407 C1QTNF8P60827 252 aa22.89■■□□□ 1.25
HLA-F-220ENST00000434407 METTL24Q5JXM2 366 aa22.89■■□□□ 1.25
HLA-F-220ENST00000434407 DCAF8Q5TAQ9 597 aa22.89■■□□□ 1.25
HLA-F-220ENST00000434407 PA2G4Q9UQ80 394 aaKnown RBP22.89■■□□□ 1.25
HLA-F-220ENST00000434407 PNMA6EA0A0J9YXQ4 647 aa22.88■■□□□ 1.25
HLA-F-220ENST00000434407 GMPSP49915 693 aaPredicted RBP22.88■■□□□ 1.25
HLA-F-220ENST00000434407 ATP8B2P98198 1209 aa22.88■■□□□ 1.25
HLA-F-220ENST00000434407 POLA2Q14181 598 aa22.88■■□□□ 1.25
HLA-F-220ENST00000434407 C20orf194Q5TEA3 1177 aa22.88■■□□□ 1.25
HLA-F-220ENST00000434407 GPRC5DQ9NZD1 345 aa22.88■■□□□ 1.25
HLA-F-220ENST00000434407 DDX19BQ9UMR2 479 aa22.88■■□□□ 1.25
HLA-F-220ENST00000434407 COG6Q9Y2V7 657 aa22.88■■□□□ 1.25
HLA-F-220ENST00000434407 ADAMTSL1Q8N6G6 1762 aa22.87■■□□□ 1.25
HLA-F-220ENST00000434407 FGFR2P21802 821 aa22.87■■□□□ 1.25
HLA-F-220ENST00000434407 EPHX2P34913 555 aa22.87■■□□□ 1.25
HLA-F-220ENST00000434407 C16orf71Q8IYS4 520 aaPredicted RBP22.87■■□□□ 1.25
HLA-F-220ENST00000434407 SSH3Q8TE77 659 aa22.87■■□□□ 1.25
HLA-F-220ENST00000434407 DPF2Q92785 391 aa22.87■■□□□ 1.25
HLA-F-220ENST00000434407 CD209Q9NNX6 404 aa22.87■■□□□ 1.25
HLA-F-220ENST00000434407 RPS12P25398 132 aaKnown RBP22.86■■□□□ 1.25
HLA-F-220ENST00000434407 IL15P40933 162 aaPredicted RBP22.86■■□□□ 1.25
HLA-F-220ENST00000434407 EPS15P42566 896 aa22.86■■□□□ 1.25
HLA-F-220ENST00000434407 SIL1Q9H173 461 aa22.86■■□□□ 1.25
HLA-F-220ENST00000434407 C1orf115Q9H7X2 142 aa22.86■■□□□ 1.25
HLA-F-220ENST00000434407 ZBTB40Q9NUA8 1239 aa22.86■■□□□ 1.25
HLA-F-220ENST00000434407 USP17L3A6NCW0 530 aa22.85■■□□□ 1.25
HLA-F-220ENST00000434407 USP17L4A6NCW7 530 aa22.85■■□□□ 1.25
HLA-F-220ENST00000434407 IL1R1P14778 569 aa22.85■■□□□ 1.25
HLA-F-220ENST00000434407 LMOD1P29536 600 aaPredicted RBP22.85■■□□□ 1.25
HLA-F-220ENST00000434407 USP17L1Q7RTZ2 530 aa22.85■■□□□ 1.25
HLA-F-220ENST00000434407 PUM3Q15397 648 aaKnown RBP22.84■■□□□ 1.25
HLA-F-220ENST00000434407 STRIP1Q5VSL9 837 aa22.84■■□□□ 1.25
HLA-F-220ENST00000434407 ZNF804AQ7Z570 1209 aa22.84■■□□□ 1.25
HLA-F-220ENST00000434407 PNMA8AQ86V59 439 aaPredicted RBP22.84■■□□□ 1.25
HLA-F-220ENST00000434407 FAM84BQ96KN1 310 aaPredicted RBP22.84■■□□□ 1.25
HLA-F-220ENST00000434407 GMLQ99445 158 aa22.84■■□□□ 1.25
HLA-F-220ENST00000434407 ZBTB12Q9Y330 459 aaPredicted RBP22.84■■□□□ 1.25
HLA-F-220ENST00000434407 POTEIP0CG38 1075 aa22.83■■□□□ 1.25
HLA-F-220ENST00000434407 POTEJP0CG39 1038 aa22.83■■□□□ 1.25
HLA-F-220ENST00000434407 FSTL1Q12841 308 aa22.83■■□□□ 1.25
HLA-F-220ENST00000434407 DACT2Q5SW24 774 aa22.83■■□□□ 1.25
HLA-F-220ENST00000434407 CEP85Q6P2H3 762 aa22.83■■□□□ 1.25
HLA-F-220ENST00000434407 RSBN1LQ6PCB5 846 aaPredicted RBP22.83■■□□□ 1.25
HLA-F-220ENST00000434407 FBXO33Q7Z6M2 555 aa22.83■■□□□ 1.25
HLA-F-220ENST00000434407 AGBL3Q8NEM8 1001 aa22.83■■□□□ 1.25
HLA-F-220ENST00000434407 CHMP4BQ9H444 224 aaKnown RBP22.83■■□□□ 1.25
HLA-F-220ENST00000434407 CEP126Q9P2H0 1117 aa22.83■■□□□ 1.25
HLA-F-220ENST00000434407 RRP1P56182 461 aaKnown RBP22.82■■□□□ 1.24
HLA-F-220ENST00000434407 C1QBPQ07021 282 aaKnown RBP22.82■■□□□ 1.24
HLA-F-220ENST00000434407 ADARB2Q9NS39 739 aaKnown RBP22.82■■□□□ 1.24
HLA-F-220ENST00000434407 CNOT7Q9UIV1 285 aaKnown RBP22.82■■□□□ 1.24
HLA-F-220ENST00000434407 TTLL5Q6EMB2 1281 aa22.81■■□□□ 1.24
HLA-F-220ENST00000434407 USP50Q70EL3 339 aaPredicted RBP22.81■■□□□ 1.24
HLA-F-220ENST00000434407 LDHDQ86WU2 507 aa22.81■■□□□ 1.24
HLA-F-220ENST00000434407 SMC1BQ8NDV3 1235 aa22.81■■□□□ 1.24
HLA-F-220ENST00000434407 TDRD7Q8NHU6 1098 aaKnown RBP22.81■■□□□ 1.24
HLA-F-220ENST00000434407 LPIN2Q92539 896 aa22.81■■□□□ 1.24
HLA-F-220ENST00000434407 SHTN1A0MZ66 631 aa22.8■■□□□ 1.24
HLA-F-220ENST00000434407 HIBADHP31937 336 aaKnown RBP22.8■■□□□ 1.24
HLA-F-220ENST00000434407 GYG1P46976 350 aa22.8■■□□□ 1.24
HLA-F-220ENST00000434407 MICALL2Q8IY33 904 aa22.8■■□□□ 1.24
HLA-F-220ENST00000434407 NOP58Q9Y2X3 529 aaKnown RBP22.8■■□□□ 1.24
HLA-F-220ENST00000434407 ARAP2Q8WZ64 1704 aa22.79■■□□□ 1.24
HLA-F-220ENST00000434407 IFIT1P09914 478 aaKnown RBP22.79■■□□□ 1.24
HLA-F-220ENST00000434407 CHADLQ6NUI6 762 aa22.79■■□□□ 1.24
HLA-F-220ENST00000434407 H7C1D1 291 aa22.78■■□□□ 1.24
HLA-F-220ENST00000434407 SASH1O94885 1247 aa22.78■■□□□ 1.24
HLA-F-220ENST00000434407 SLC5A1P13866 664 aa22.78■■□□□ 1.24
HLA-F-220ENST00000434407 ZNF280AP59817 542 aaPredicted RBP22.78■■□□□ 1.24
HLA-F-220ENST00000434407 GTF2IP78347 998 aa22.78■■□□□ 1.24
HLA-F-220ENST00000434407 ATP2B3Q16720 1220 aa22.78■■□□□ 1.24
HLA-F-220ENST00000434407 FAM205AQ6ZU69 1335 aa22.78■■□□□ 1.24
HLA-F-220ENST00000434407 MYO3BQ8WXR4 1341 aa22.78■■□□□ 1.24
HLA-F-220ENST00000434407 POLR2AP24928 1970 aaKnown RBP22.78■■□□□ 1.24
HLA-F-220ENST00000434407 FKBP1AP62942 108 aaKnown RBP22.77■■□□□ 1.24
HLA-F-220ENST00000434407 G3BP1Q13283 466 aaKnown RBP eCLIP22.77■■□□□ 1.24
HLA-F-220ENST00000434407 EAPPQ56P03 285 aaPredicted RBP22.77■■□□□ 1.24
HLA-F-220ENST00000434407 CAVIN4Q5BKX8 364 aa22.77■■□□□ 1.24
HLA-F-220ENST00000434407 RPAP2Q8IXW5 612 aaPredicted RBP22.77■■□□□ 1.24
HLA-F-220ENST00000434407 MYH13Q9UKX3 1938 aa22.76■■□□□ 1.23
HLA-F-220ENST00000434407 ZBTB22O15209 634 aa22.76■■□□□ 1.23
HLA-F-220ENST00000434407 MMP14P50281 582 aa22.76■■□□□ 1.23
HLA-F-220ENST00000434407 BCAMP50895 628 aa22.76■■□□□ 1.23
HLA-F-220ENST00000434407 HIRAP54198 1017 aaPredicted RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms