RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 CCSER2Q9H7U1 834 aa5.04□□□□□ -1.6
HMGB1P27-201ENST00000431429 COPRSQ9NQ92 184 aa5.04□□□□□ -1.6
HMGB1P27-201ENST00000431429 GGT7Q9UJ14 662 aa5.04□□□□□ -1.6
HMGB1P27-201ENST00000431429 GPR25O00155 361 aa5.03□□□□□ -1.6
HMGB1P27-201ENST00000431429 TRPA1O75762 1119 aa5.03□□□□□ -1.6
HMGB1P27-201ENST00000431429 ARAFP10398 606 aa5.03□□□□□ -1.6
HMGB1P27-201ENST00000431429 GARTP22102 1010 aa5.03□□□□□ -1.6
HMGB1P27-201ENST00000431429 FCGRTP55899 365 aa5.03□□□□□ -1.6
HMGB1P27-201ENST00000431429 FAAP100Q0VG06 881 aa5.03□□□□□ -1.6
HMGB1P27-201ENST00000431429 SV2AQ7L0J3 742 aa5.03□□□□□ -1.6
HMGB1P27-201ENST00000431429 SV2BQ7L1I2 683 aa5.03□□□□□ -1.6
HMGB1P27-201ENST00000431429 SYT9Q86SS6 491 aa5.03□□□□□ -1.6
HMGB1P27-201ENST00000431429 NCAPG2Q86XI2 1143 aa5.03□□□□□ -1.6
HMGB1P27-201ENST00000431429 NPAS3Q8IXF0 933 aa5.03□□□□□ -1.6
HMGB1P27-201ENST00000431429 VWA5B2Q8N398 1253 aa5.03□□□□□ -1.6
HMGB1P27-201ENST00000431429 UBXN4Q92575 508 aa5.03□□□□□ -1.6
HMGB1P27-201ENST00000431429 ARMC5Q96C12 935 aa5.03□□□□□ -1.6
HMGB1P27-201ENST00000431429 NSUN5Q96P11 429 aaKnown RBP5.03□□□□□ -1.6
HMGB1P27-201ENST00000431429 TRERF1Q96PN7 1200 aa5.03□□□□□ -1.6
HMGB1P27-201ENST00000431429 RASSF4Q9H2L5 321 aa5.03□□□□□ -1.6
HMGB1P27-201ENST00000431429 ZFYVE1Q9HBF4 777 aa5.03□□□□□ -1.6
HMGB1P27-201ENST00000431429 DNAJB12Q9NXW2 375 aaKnown RBP5.03□□□□□ -1.6
HMGB1P27-201ENST00000431429 USP35Q9P2H5 1018 aa5.03□□□□□ -1.6
HMGB1P27-201ENST00000431429 A0A096LPE4 126 aa5.02□□□□□ -1.61
HMGB1P27-201ENST00000431429 A0A1W2PPZ6 126 aa5.02□□□□□ -1.61
HMGB1P27-201ENST00000431429 METTL12A8MUP2 240 aa5.02□□□□□ -1.61
HMGB1P27-201ENST00000431429 ENC1O14682 589 aa5.02□□□□□ -1.61
HMGB1P27-201ENST00000431429 ATP11AP98196 1134 aa5.02□□□□□ -1.61
HMGB1P27-201ENST00000431429 NEUROD1Q13562 356 aa5.02□□□□□ -1.61
HMGB1P27-201ENST00000431429 PCSK7Q16549 785 aa5.02□□□□□ -1.61
HMGB1P27-201ENST00000431429 SPRED3Q2MJR0 410 aa5.02□□□□□ -1.61
HMGB1P27-201ENST00000431429 TTC9Q92623 222 aa5.02□□□□□ -1.61
HMGB1P27-201ENST00000431429 NECAB3Q96P71 396 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P27-201ENST00000431429 TRIM56Q9BRZ2 755 aaKnown RBP5.02□□□□□ -1.61
HMGB1P27-201ENST00000431429 ADAM19Q9H013 955 aa5.02□□□□□ -1.61
HMGB1P27-201ENST00000431429 KBTBD4Q9NVX7 518 aa5.02□□□□□ -1.61
HMGB1P27-201ENST00000431429 PPP4R2Q9NY27 417 aa5.02□□□□□ -1.61
HMGB1P27-201ENST00000431429 ADAMTS1Q9UHI8 967 aa5.02□□□□□ -1.61
HMGB1P27-201ENST00000431429 NAGPAQ9UK23 515 aa5.02□□□□□ -1.61
HMGB1P27-201ENST00000431429 SOX13Q9UN79 622 aa5.02□□□□□ -1.61
HMGB1P27-201ENST00000431429 TTF2Q9UNY4 1162 aaKnown RBP5.02□□□□□ -1.61
HMGB1P27-201ENST00000431429 C11orf95C9JLR9 678 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P27-201ENST00000431429 J3QW42 95 aa5.01□□□□□ -1.61
HMGB1P27-201ENST00000431429 PDE2AO00408 941 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P27-201ENST00000431429 FGRP09769 529 aa5.01□□□□□ -1.61
HMGB1P27-201ENST00000431429 FOXR1Q6PIV2 292 aa5.01□□□□□ -1.61
HMGB1P27-201ENST00000431429 DTHD1Q6ZMT9 781 aa5.01□□□□□ -1.61
HMGB1P27-201ENST00000431429 FCHSD1Q86WN1 690 aa5.01□□□□□ -1.61
HMGB1P27-201ENST00000431429 GPR161Q8N6U8 529 aaKnown RBP5.01□□□□□ -1.61
HMGB1P27-201ENST00000431429 PHC3Q8NDX5 983 aa5.01□□□□□ -1.61
HMGB1P27-201ENST00000431429 TMEM74Q96NL1 305 aa5.01□□□□□ -1.61
HMGB1P27-201ENST00000431429 POP1Q99575 1024 aaKnown RBP5.01□□□□□ -1.61
HMGB1P27-201ENST00000431429 LPIN3Q9BQK8 851 aa5.01□□□□□ -1.61
HMGB1P27-201ENST00000431429 CAPN10Q9HC96 672 aa5.01□□□□□ -1.61
HMGB1P27-201ENST00000431429 SEC31BQ9NQW1 1179 aa5.01□□□□□ -1.61
HMGB1P27-201ENST00000431429 FRRS1LQ9P0K9 344 aa5.01□□□□□ -1.61
HMGB1P27-201ENST00000431429 SLC6A14Q9UN76 642 aa5.01□□□□□ -1.61
HMGB1P27-201ENST00000431429 CDC14CA4D256 554 aa5□□□□□ -1.61
HMGB1P27-201ENST00000431429 H3BM21 787 aa5□□□□□ -1.61
HMGB1P27-201ENST00000431429 GREM1O60565 184 aa5□□□□□ -1.61
HMGB1P27-201ENST00000431429 CELA3AP09093 270 aa5□□□□□ -1.61
HMGB1P27-201ENST00000431429 RLBP1P12271 317 aa5□□□□□ -1.61
HMGB1P27-201ENST00000431429 RPS26P62854 115 aaKnown RBP5□□□□□ -1.61
HMGB1P27-201ENST00000431429 MLLT1Q03111 559 aaPredicted RBP5□□□□□ -1.61
HMGB1P27-201ENST00000431429 PAK2Q13177 524 aa5□□□□□ -1.61
HMGB1P27-201ENST00000431429 PWP1Q13610 501 aa5□□□□□ -1.61
HMGB1P27-201ENST00000431429 CCDC85BQ15834 202 aaPredicted RBP5□□□□□ -1.61
HMGB1P27-201ENST00000431429 PERM1Q5SV97 790 aa5□□□□□ -1.61
HMGB1P27-201ENST00000431429 ILDR2Q71H61 639 aa5□□□□□ -1.61
HMGB1P27-201ENST00000431429 VN1R5Q7Z5H4 357 aa5□□□□□ -1.61
HMGB1P27-201ENST00000431429 CEP44Q9C0F1 390 aa5□□□□□ -1.61
HMGB1P27-201ENST00000431429 MUC3BQ9H195 1237 aa5□□□□□ -1.61
HMGB1P27-201ENST00000431429 MBIPQ9NS73 344 aa5□□□□□ -1.61
HMGB1P27-201ENST00000431429 FBXO24O75426 580 aa4.99□□□□□ -1.61
HMGB1P27-201ENST00000431429 B3GALT4O96024 378 aa4.99□□□□□ -1.61
HMGB1P27-201ENST00000431429 BMP4P12644 408 aa4.99□□□□□ -1.61
HMGB1P27-201ENST00000431429 ATF4P18848 351 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P27-201ENST00000431429 MX2P20592 715 aa4.99□□□□□ -1.61
HMGB1P27-201ENST00000431429 ADH6P28332 368 aa4.99□□□□□ -1.61
HMGB1P27-201ENST00000431429 ADH7P40394 386 aa4.99□□□□□ -1.61
HMGB1P27-201ENST00000431429 MAP2K3P46734 347 aa4.99□□□□□ -1.61
HMGB1P27-201ENST00000431429 LIG3P49916 1009 aa4.99□□□□□ -1.61
HMGB1P27-201ENST00000431429 PCBP4P57723 403 aaKnown RBP4.99□□□□□ -1.61
HMGB1P27-201ENST00000431429 RBL2Q08999 1139 aa4.99□□□□□ -1.61
HMGB1P27-201ENST00000431429 GRIK5Q16478 980 aa4.99□□□□□ -1.61
HMGB1P27-201ENST00000431429 AGMOQ6ZNB7 445 aa4.99□□□□□ -1.61
HMGB1P27-201ENST00000431429 C20orf204Q6ZNR8 217 aa4.99□□□□□ -1.61
HMGB1P27-201ENST00000431429 HFE2Q6ZVN8 426 aa4.99□□□□□ -1.61
HMGB1P27-201ENST00000431429 MCF2L2Q86YR7 1114 aa4.99□□□□□ -1.61
HMGB1P27-201ENST00000431429 BSNDQ8WZ55 320 aa4.99□□□□□ -1.61
HMGB1P27-201ENST00000431429 EAF1Q96JC9 268 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P27-201ENST00000431429 SPACA7Q96KW9 195 aa4.99□□□□□ -1.61
HMGB1P27-201ENST00000431429 UBE2OQ9C0C9 1292 aaKnown RBP4.99□□□□□ -1.61
HMGB1P27-201ENST00000431429 NXF1Q9UBU9 619 aaKnown RBP4.99□□□□□ -1.61
HMGB1P27-201ENST00000431429 PRKAG2Q9UGJ0 569 aa4.99□□□□□ -1.61
HMGB1P27-201ENST00000431429 PRR12Q9ULL5 1215 aa4.99□□□□□ -1.61
HMGB1P27-201ENST00000431429 AKAP2Q9Y2D5 859 aa4.99□□□□□ -1.61
HMGB1P27-201ENST00000431429 INPP5FQ9Y2H2 1132 aa4.99□□□□□ -1.61
HMGB1P27-201ENST00000431429 TM4SF5O14894 197 aa4.98□□□□□ -1.61
HMGB1P27-201ENST00000431429 PAGE1O75459 146 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms