RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 MS4A1P11836 297 aa11.47□□□□□ -0.57
SMC1A-203ENST00000428014 FXR2P51116 673 aaKnown RBP eCLIP11.47□□□□□ -0.571e-6■■■□□ 15.3
SMC1A-203ENST00000428014 STRIP1Q5VSL9 837 aa11.47□□□□□ -0.57
SMC1A-203ENST00000428014 SPOCK2Q92563 424 aa11.47□□□□□ -0.57
SMC1A-203ENST00000428014 ECE2O60344 883 aa11.46□□□□□ -0.57
SMC1A-203ENST00000428014 CHRNDQ07001 517 aa11.46□□□□□ -0.57
SMC1A-203ENST00000428014 ZKSCAN2Q63HK3 967 aa11.46□□□□□ -0.57
SMC1A-203ENST00000428014 LDHAL6AQ6ZMR3 332 aa11.46□□□□□ -0.57
SMC1A-203ENST00000428014 ANKRD44Q8N8A2 993 aa11.46□□□□□ -0.57
SMC1A-203ENST00000428014 SUCLG2Q96I99 432 aa11.46□□□□□ -0.57
SMC1A-203ENST00000428014 GMLQ99445 158 aa11.46□□□□□ -0.57
SMC1A-203ENST00000428014 RIPOR2Q9Y4F9 1068 aa11.46□□□□□ -0.57
SMC1A-203ENST00000428014 H7C1D1 291 aa11.45□□□□□ -0.58
SMC1A-203ENST00000428014 CIAO1O76071 339 aa11.45□□□□□ -0.58
SMC1A-203ENST00000428014 ITGBL1O95965 494 aaPredicted RBP11.45□□□□□ -0.58
SMC1A-203ENST00000428014 UBTFL1P0CB47 393 aaPredicted RBP11.45□□□□□ -0.58
SMC1A-203ENST00000428014 MNX1P50219 401 aaPredicted RBP11.45□□□□□ -0.58
SMC1A-203ENST00000428014 ZNF280AP59817 542 aaPredicted RBP11.45□□□□□ -0.58
SMC1A-203ENST00000428014 EPHA10Q5JZY3 1008 aa11.45□□□□□ -0.58
SMC1A-203ENST00000428014 JARID2Q92833 1246 aaPredicted RBP11.45□□□□□ -0.58
SMC1A-203ENST00000428014 BICC1Q9H694 974 aaKnown RBP11.45□□□□□ -0.58
SMC1A-203ENST00000428014 USP17L3A6NCW0 530 aa11.44□□□□□ -0.58
SMC1A-203ENST00000428014 USP17L4A6NCW7 530 aa11.44□□□□□ -0.58
SMC1A-203ENST00000428014 PRKAR2AP13861 404 aaKnown RBP11.44□□□□□ -0.58
SMC1A-203ENST00000428014 TRIM27P14373 513 aa11.44□□□□□ -0.58
SMC1A-203ENST00000428014 IL1R1P14778 569 aa11.44□□□□□ -0.58
SMC1A-203ENST00000428014 TAF7LQ5H9L4 462 aa11.44□□□□□ -0.58
SMC1A-203ENST00000428014 RSBN1LQ6PCB5 846 aaPredicted RBP11.44□□□□□ -0.58
SMC1A-203ENST00000428014 USP17L1Q7RTZ2 530 aa11.44□□□□□ -0.58
SMC1A-203ENST00000428014 PIP4P2Q8N4L2 257 aa11.44□□□□□ -0.58
SMC1A-203ENST00000428014 BCL2L13Q9BXK5 485 aa11.44□□□□□ -0.58
SMC1A-203ENST00000428014 COPRSQ9NQ92 184 aa11.44□□□□□ -0.58
SMC1A-203ENST00000428014 SCN9AQ15858 1988 aa11.44□□□□□ -0.58
SMC1A-203ENST00000428014 A0A1B0GUL6 1792 aa11.44□□□□□ -0.58
SMC1A-203ENST00000428014 CEP350Q5VT06 3117 aa11.43□□□□□ -0.58
SMC1A-203ENST00000428014 PITPNM2Q9BZ72 1349 aa11.43□□□□□ -0.58
SMC1A-203ENST00000428014 G3V3G9 751 aa11.43□□□□□ -0.58
SMC1A-203ENST00000428014 PSMD14O00487 310 aa11.43□□□□□ -0.58
SMC1A-203ENST00000428014 IGSF3O75054 1194 aa11.43□□□□□ -0.58
SMC1A-203ENST00000428014 EPS15P42566 896 aa11.43□□□□□ -0.58
SMC1A-203ENST00000428014 GMPSP49915 693 aaPredicted RBP11.43□□□□□ -0.58
SMC1A-203ENST00000428014 DCAF8Q5TAQ9 597 aa11.43□□□□□ -0.58
SMC1A-203ENST00000428014 VGLL2Q8N8G2 317 aa11.43□□□□□ -0.58
SMC1A-203ENST00000428014 HHIPL1Q96JK4 782 aa11.43□□□□□ -0.58
SMC1A-203ENST00000428014 CHMP4BQ9H444 224 aaKnown RBP11.43□□□□□ -0.58
SMC1A-203ENST00000428014 CNOT7Q9UIV1 285 aaKnown RBP11.43□□□□□ -0.58
SMC1A-203ENST00000428014 GJA3Q9Y6H8 435 aa11.43□□□□□ -0.58
SMC1A-203ENST00000428014 FAM205AQ6ZU69 1335 aa11.42□□□□□ -0.58
SMC1A-203ENST00000428014 SASH1O94885 1247 aa11.42□□□□□ -0.58
SMC1A-203ENST00000428014 PDE8BO95263 885 aa11.42□□□□□ -0.58
SMC1A-203ENST00000428014 RFX5P48382 616 aaPredicted RBP11.42□□□□□ -0.58
SMC1A-203ENST00000428014 DACT2Q5SW24 774 aa11.42□□□□□ -0.58
SMC1A-203ENST00000428014 ZNF804AQ7Z570 1209 aa11.42□□□□□ -0.58
SMC1A-203ENST00000428014 DNAJC5GQ8N7S2 189 aa11.42□□□□□ -0.58
SMC1A-203ENST00000428014 JMYQ8N9B5 988 aa11.42□□□□□ -0.58
SMC1A-203ENST00000428014 MTMR14Q8NCE2 650 aa11.42□□□□□ -0.58
SMC1A-203ENST00000428014 CCDC85AQ96PX6 553 aaPredicted RBP11.42□□□□□ -0.58
SMC1A-203ENST00000428014 DBNDD1Q9H9R9 158 aa11.42□□□□□ -0.58
SMC1A-203ENST00000428014 CNNM1Q9NRU3 951 aa11.42□□□□□ -0.58
SMC1A-203ENST00000428014 SUGT1Q9Y2Z0 365 aa11.42□□□□□ -0.58
SMC1A-203ENST00000428014 EYA2O00167 538 aa11.41□□□□□ -0.58
SMC1A-203ENST00000428014 RAD17O75943 681 aa11.41□□□□□ -0.58
SMC1A-203ENST00000428014 KCNJ4P48050 445 aa11.41□□□□□ -0.58
SMC1A-203ENST00000428014 PTPN12Q05209 780 aaKnown RBP11.41□□□□□ -0.58
SMC1A-203ENST00000428014 CDC37L1Q7L3B6 337 aa11.41□□□□□ -0.58
SMC1A-203ENST00000428014 SLC51AQ86UW1 340 aa11.41□□□□□ -0.58
SMC1A-203ENST00000428014 CNTROBQ8N137 903 aa11.41□□□□□ -0.58
SMC1A-203ENST00000428014 MRIQ9BWK5 157 aa11.41□□□□□ -0.58
SMC1A-203ENST00000428014 CD209Q9NNX6 404 aa11.41□□□□□ -0.58
SMC1A-203ENST00000428014 ZNF646O15015 1829 aaPredicted RBP11.41□□□□□ -0.58
SMC1A-203ENST00000428014 SPEF2Q9C093 1822 aa11.4□□□□□ -0.58
SMC1A-203ENST00000428014 RIMBP2O15034 1052 aa11.4□□□□□ -0.58
SMC1A-203ENST00000428014 USP17L8P0C7I0 530 aa11.4□□□□□ -0.58
SMC1A-203ENST00000428014 FGFR2P21802 821 aa11.4□□□□□ -0.58
SMC1A-203ENST00000428014 IL15P40933 162 aaPredicted RBP11.4□□□□□ -0.58
SMC1A-203ENST00000428014 PUM3Q15397 648 aaKnown RBP11.4□□□□□ -0.58
SMC1A-203ENST00000428014 FBXO33Q7Z6M2 555 aa11.4□□□□□ -0.58
SMC1A-203ENST00000428014 MICALL2Q8IY33 904 aa11.4□□□□□ -0.58
SMC1A-203ENST00000428014 OGFOD1Q8N543 542 aa11.4□□□□□ -0.58
SMC1A-203ENST00000428014 TDRD7Q8NHU6 1098 aaKnown RBP11.4□□□□□ -0.58
SMC1A-203ENST00000428014 CHMP3Q9Y3E7 222 aa11.4□□□□□ -0.58
SMC1A-203ENST00000428014 PDS5AQ29RF7 1337 aaKnown RBP11.39□□□□□ -0.59
SMC1A-203ENST00000428014 TMEM88BA6NKF7 163 aa11.39□□□□□ -0.59
SMC1A-203ENST00000428014 SEMA3EO15041 775 aa11.39□□□□□ -0.59
SMC1A-203ENST00000428014 BCAR3O75815 825 aa11.39□□□□□ -0.59
SMC1A-203ENST00000428014 GNAI2P04899 355 aa11.39□□□□□ -0.59
SMC1A-203ENST00000428014 HDLBPQ00341 1268 aaKnown RBP11.39□□□□□ -0.59
SMC1A-203ENST00000428014 DOK7Q18PE1 504 aa11.39□□□□□ -0.59
SMC1A-203ENST00000428014 TTLL5Q6EMB2 1281 aa11.39□□□□□ -0.59
SMC1A-203ENST00000428014 DZIP1LQ8IYY4 767 aaKnown RBP11.39□□□□□ -0.59
SMC1A-203ENST00000428014 TBC1D22AQ8WUA7 517 aa11.39□□□□□ -0.59
SMC1A-203ENST00000428014 LPIN2Q92539 896 aa11.39□□□□□ -0.59
SMC1A-203ENST00000428014 KLRG1Q96E93 195 aa11.39□□□□□ -0.59
SMC1A-203ENST00000428014 COL1A1P02452 1464 aaPredicted RBP11.38□□□□□ -0.59
SMC1A-203ENST00000428014 TRPM7Q96QT4 1865 aa11.38□□□□□ -0.59
SMC1A-203ENST00000428014 UNCXA6NJT0 531 aa11.38□□□□□ -0.59
SMC1A-203ENST00000428014 RASSF10A6NK89 507 aa11.38□□□□□ -0.59
SMC1A-203ENST00000428014 IFIT1P09914 478 aaKnown RBP11.38□□□□□ -0.59
SMC1A-203ENST00000428014 POTEIP0CG38 1075 aa11.38□□□□□ -0.59
SMC1A-203ENST00000428014 POTEJP0CG39 1038 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms