RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 CCDC152Q4G0S7 254 aa13.26□□□□□ -0.29
TNFAIP3-202ENST00000420009 DCAF8Q5TAQ9 597 aa13.26□□□□□ -0.29
TNFAIP3-202ENST00000420009 DUSP27Q5VZP5 1158 aa13.26□□□□□ -0.29
TNFAIP3-202ENST00000420009 PCCAP05165 728 aaPredicted RBP13.25□□□□□ -0.29
TNFAIP3-202ENST00000420009 GOLGA2Q08379 1002 aa13.25□□□□□ -0.29
TNFAIP3-202ENST00000420009 NOM1Q5C9Z4 860 aaKnown RBP13.25□□□□□ -0.29
TNFAIP3-202ENST00000420009 MOB2Q70IA6 237 aa13.25□□□□□ -0.29
TNFAIP3-202ENST00000420009 ZNF296Q8WUU4 475 aaPredicted RBP13.25□□□□□ -0.29
TNFAIP3-202ENST00000420009 RUNDC1Q96C34 613 aa13.25□□□□□ -0.29
TNFAIP3-202ENST00000420009 HTTP42858 3142 aa13.25□□□□□ -0.29
TNFAIP3-202ENST00000420009 MED23Q9ULK4 1368 aa13.24□□□□□ -0.29
TNFAIP3-202ENST00000420009 USP17L3A6NCW0 530 aa13.24□□□□□ -0.29
TNFAIP3-202ENST00000420009 USP17L4A6NCW7 530 aa13.24□□□□□ -0.29
TNFAIP3-202ENST00000420009 PDE8AO60658 829 aa13.24□□□□□ -0.29
TNFAIP3-202ENST00000420009 USP17L1Q7RTZ2 530 aa13.24□□□□□ -0.29
TNFAIP3-202ENST00000420009 RIC3Q7Z5B4 369 aa13.24□□□□□ -0.29
TNFAIP3-202ENST00000420009 PODNQ7Z5L7 613 aa13.24□□□□□ -0.29
TNFAIP3-202ENST00000420009 CCDC191Q8NCU4 936 aa13.24□□□□□ -0.29
TNFAIP3-202ENST00000420009 MBIPQ9NS73 344 aa13.24□□□□□ -0.29
TNFAIP3-202ENST00000420009 MKI67P46013 3256 aaKnown RBP13.23□□□□□ -0.29
TNFAIP3-202ENST00000420009 MYBBP1AQ9BQG0 1328 aaKnown RBP13.23□□□□□ -0.29
TNFAIP3-202ENST00000420009 UBE2Q2LH0YL09 131 aa13.23□□□□□ -0.29
TNFAIP3-202ENST00000420009 TBC1D8O95759 1140 aa13.23□□□□□ -0.29
TNFAIP3-202ENST00000420009 ATP2B4P23634 1241 aa13.23□□□□□ -0.29
TNFAIP3-202ENST00000420009 TM4SF4P48230 202 aa13.23□□□□□ -0.29
TNFAIP3-202ENST00000420009 ANKRD18AQ8IVF6 992 aa13.23□□□□□ -0.29
TNFAIP3-202ENST00000420009 MYD88Q99836 296 aa13.23□□□□□ -0.29
TNFAIP3-202ENST00000420009 PHAXQ9H814 394 aaKnown RBP13.23□□□□□ -0.29
TNFAIP3-202ENST00000420009 SCAF8Q9UPN6 1271 aaKnown RBP13.23□□□□□ -0.29
TNFAIP3-202ENST00000420009 ZNF853P0CG23 659 aa13.22□□□□□ -0.29
TNFAIP3-202ENST00000420009 NBPF9Q3BBW0 867 aa13.22□□□□□ -0.29
TNFAIP3-202ENST00000420009 DACT2Q5SW24 774 aa13.22□□□□□ -0.29
TNFAIP3-202ENST00000420009 PRAMEF18Q5VWM3 479 aa13.22□□□□□ -0.29
TNFAIP3-202ENST00000420009 CCDC85AQ96PX6 553 aaPredicted RBP13.22□□□□□ -0.29
TNFAIP3-202ENST00000420009 CFHR5Q9BXR6 569 aa13.22□□□□□ -0.29
TNFAIP3-202ENST00000420009 CWC25Q9NXE8 425 aaPredicted RBP13.22□□□□□ -0.29
TNFAIP3-202ENST00000420009 HDAC9Q9UKV0 1011 aa13.22□□□□□ -0.29
TNFAIP3-202ENST00000420009 WTIPA6NIX2 430 aaPredicted RBP13.21□□□□□ -0.29
TNFAIP3-202ENST00000420009 GPR25O00155 361 aa13.21□□□□□ -0.29
TNFAIP3-202ENST00000420009 WNT10BO00744 389 aa13.21□□□□□ -0.29
TNFAIP3-202ENST00000420009 FBXO46Q6PJ61 603 aaPredicted RBP13.21□□□□□ -0.29
TNFAIP3-202ENST00000420009 BRCA2P51587 3418 aa13.2□□□□□ -0.3
TNFAIP3-202ENST00000420009 MYO3BQ8WXR4 1341 aa13.2□□□□□ -0.3
TNFAIP3-202ENST00000420009 PRR29P0C7W0 189 aa13.2□□□□□ -0.3
TNFAIP3-202ENST00000420009 CTSWP56202 376 aa13.2□□□□□ -0.3
TNFAIP3-202ENST00000420009 JARID2Q92833 1246 aaPredicted RBP13.2□□□□□ -0.3
TNFAIP3-202ENST00000420009 CDC5LQ99459 802 aaKnown RBP13.2□□□□□ -0.3
TNFAIP3-202ENST00000420009 METTL22Q9BUU2 404 aaPredicted RBP13.2□□□□□ -0.3
TNFAIP3-202ENST00000420009 MXD3Q9BW11 206 aa13.2□□□□□ -0.3
TNFAIP3-202ENST00000420009 NF2P35240 595 aa13.19□□□□□ -0.3
TNFAIP3-202ENST00000420009 SREBF2Q12772 1141 aa13.19□□□□□ -0.3
TNFAIP3-202ENST00000420009 TTLL12Q14166 644 aaPredicted RBP13.19□□□□□ -0.3
TNFAIP3-202ENST00000420009 WDR43Q15061 677 aaKnown RBP eCLIP13.19□□□□□ -0.3
TNFAIP3-202ENST00000420009 STRIP1Q5VSL9 837 aa13.19□□□□□ -0.3
TNFAIP3-202ENST00000420009 OGFOD1Q8N543 542 aa13.19□□□□□ -0.3
TNFAIP3-202ENST00000420009 BSDC1Q9NW68 430 aaPredicted RBP13.19□□□□□ -0.3
TNFAIP3-202ENST00000420009 IFT57Q9NWB7 429 aa13.19□□□□□ -0.3
TNFAIP3-202ENST00000420009 MINPP1Q9UNW1 487 aa13.19□□□□□ -0.3
TNFAIP3-202ENST00000420009 ADAMTS8Q9UP79 889 aa13.19□□□□□ -0.3
TNFAIP3-202ENST00000420009 CENPFP49454 3210 aa13.18□□□□□ -0.3
TNFAIP3-202ENST00000420009 COL1A1P02452 1464 aaPredicted RBP13.18□□□□□ -0.3
TNFAIP3-202ENST00000420009 SASH1O94885 1247 aa13.18□□□□□ -0.3
TNFAIP3-202ENST00000420009 MMP14P50281 582 aa13.18□□□□□ -0.3
TNFAIP3-202ENST00000420009 CCT4P50991 539 aaKnown RBP13.18□□□□□ -0.3
TNFAIP3-202ENST00000420009 PTPN12Q05209 780 aaKnown RBP13.18□□□□□ -0.3
TNFAIP3-202ENST00000420009 MKRN3Q13064 507 aaKnown RBP13.18□□□□□ -0.3
TNFAIP3-202ENST00000420009 LDLRAD1Q5T700 205 aa13.18□□□□□ -0.3
TNFAIP3-202ENST00000420009 TTLL11Q8NHH1 800 aa13.18□□□□□ -0.3
TNFAIP3-202ENST00000420009 COA1Q9GZY4 146 aa13.18□□□□□ -0.3
TNFAIP3-202ENST00000420009 R3HDMLQ9H3Y0 253 aa13.18□□□□□ -0.3
TNFAIP3-202ENST00000420009 GREM2Q9H772 168 aa13.18□□□□□ -0.3
TNFAIP3-202ENST00000420009 SPEF2Q9C093 1822 aa13.18□□□□□ -0.3
TNFAIP3-202ENST00000420009 FKTNO75072 461 aa13.17□□□□□ -0.3
TNFAIP3-202ENST00000420009 DDX58O95786 925 aaKnown RBP13.17□□□□□ -0.3
TNFAIP3-202ENST00000420009 IGKV5-2P06315 115 aa13.17□□□□□ -0.3
TNFAIP3-202ENST00000420009 TXNRD3Q86VQ6 643 aa13.17□□□□□ -0.3
TNFAIP3-202ENST00000420009 APOBEC3FQ8IUX4 373 aaKnown RBP13.17□□□□□ -0.3
TNFAIP3-202ENST00000420009 ZBED3Q96IU2 234 aaPredicted RBP13.17□□□□□ -0.3
TNFAIP3-202ENST00000420009 LAMB1P07942 1786 aa13.17□□□□□ -0.3
TNFAIP3-202ENST00000420009 SSC5DA1L4H1 1573 aa13.16□□□□□ -0.3
TNFAIP3-202ENST00000420009 MYH3P11055 1940 aa13.16□□□□□ -0.3
TNFAIP3-202ENST00000420009 ELL2O00472 640 aaPredicted RBP13.16□□□□□ -0.3
TNFAIP3-202ENST00000420009 GNAI1P63096 354 aa13.16□□□□□ -0.3
TNFAIP3-202ENST00000420009 SPRYD7Q5W111 196 aa13.16□□□□□ -0.3
TNFAIP3-202ENST00000420009 ARMC9Q7Z3E5 817 aa13.16□□□□□ -0.3
TNFAIP3-202ENST00000420009 C8orf58Q8NAV2 365 aa13.16□□□□□ -0.3
TNFAIP3-202ENST00000420009 MAP3K2Q9Y2U5 619 aa13.16□□□□□ -0.3
TNFAIP3-202ENST00000420009 KLRK1P26718 216 aa13.15□□□□□ -0.3
TNFAIP3-202ENST00000420009 FBXW7Q969H0 707 aa13.15□□□□□ -0.3
TNFAIP3-202ENST00000420009 LEMD3Q9Y2U8 911 aa13.15□□□□□ -0.3
TNFAIP3-202ENST00000420009 ALDH1A1P00352 501 aa13.14□□□□□ -0.31
TNFAIP3-202ENST00000420009 CALD1Q05682 793 aaKnown RBP13.14□□□□□ -0.31
TNFAIP3-202ENST00000420009 PRKG1Q13976 671 aa13.14□□□□□ -0.31
TNFAIP3-202ENST00000420009 MAP3K11Q16584 847 aa13.14□□□□□ -0.31
TNFAIP3-202ENST00000420009 CCDC30Q5VVM6 783 aa13.14□□□□□ -0.31
TNFAIP3-202ENST00000420009 KSR2Q6VAB6 950 aa13.14□□□□□ -0.31
TNFAIP3-202ENST00000420009 KIAA0825Q8IV33 1275 aa13.14□□□□□ -0.31
TNFAIP3-202ENST00000420009 GCC1Q96CN9 775 aa13.14□□□□□ -0.31
TNFAIP3-202ENST00000420009 ZNF804BA4D1E1 1349 aa13.13□□□□□ -0.31
TNFAIP3-202ENST00000420009 PI4KAP2A4QPH2 592 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms