RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 TTLL11Q8NHH1 800 aa11.38□□□□□ -0.59
CHRNA1-206ENST00000416004 RTL9Q8NET4 1388 aa11.38□□□□□ -0.59
CHRNA1-206ENST00000416004 FOXO4P98177 505 aa11.38□□□□□ -0.59
CHRNA1-206ENST00000416004 PLA2G12BQ9BX93 195 aa11.38□□□□□ -0.59
CHRNA1-206ENST00000416004 ANKRD2Q9GZV1 360 aa11.38□□□□□ -0.59
CHRNA1-206ENST00000416004 BSDC1Q9NW68 430 aaPredicted RBP11.38□□□□□ -0.59
CHRNA1-206ENST00000416004 PODXL2Q9NZ53 605 aa11.38□□□□□ -0.59
CHRNA1-206ENST00000416004 POTECB2RU33 542 aa11.37□□□□□ -0.59
CHRNA1-206ENST00000416004 KCNJ4P48050 445 aa11.37□□□□□ -0.59
CHRNA1-206ENST00000416004 IFIT5Q13325 482 aaKnown RBP11.37□□□□□ -0.59
CHRNA1-206ENST00000416004 CCDC57Q2TAC2 916 aa11.37□□□□□ -0.59
CHRNA1-206ENST00000416004 RABL6Q3YEC7 729 aaPredicted RBP11.37□□□□□ -0.59
CHRNA1-206ENST00000416004 TBC1D16Q8TBP0 767 aa11.37□□□□□ -0.59
CHRNA1-206ENST00000416004 OTUD7AQ8TE49 926 aaPredicted RBP11.37□□□□□ -0.59
CHRNA1-206ENST00000416004 UBE2Q2Q8WVN8 375 aa11.37□□□□□ -0.59
CHRNA1-206ENST00000416004 GREM2Q9H772 168 aa11.37□□□□□ -0.59
CHRNA1-206ENST00000416004 PA2G4Q9UQ80 394 aaKnown RBP11.37□□□□□ -0.59
CHRNA1-206ENST00000416004 HDAC5Q9UQL6 1122 aa11.37□□□□□ -0.59
CHRNA1-206ENST00000416004 H7C1D1 291 aa11.36□□□□□ -0.59
CHRNA1-206ENST00000416004 ITGA6P23229 1130 aa11.36□□□□□ -0.59
CHRNA1-206ENST00000416004 USP50Q70EL3 339 aaPredicted RBP11.36□□□□□ -0.59
CHRNA1-206ENST00000416004 ECE2O60344 883 aa11.36□□□□□ -0.59
CHRNA1-206ENST00000416004 SURF6O75683 361 aaKnown RBP11.36□□□□□ -0.59
CHRNA1-206ENST00000416004 RAD17O75943 681 aa11.36□□□□□ -0.59
CHRNA1-206ENST00000416004 CXCL9Q07325 125 aa11.36□□□□□ -0.59
CHRNA1-206ENST00000416004 LMBR1LQ6UX01 489 aa11.36□□□□□ -0.59
CHRNA1-206ENST00000416004 KLHDC4Q8TBB5 520 aa11.36□□□□□ -0.59
CHRNA1-206ENST00000416004 DBNDD1Q9H9R9 158 aa11.36□□□□□ -0.59
CHRNA1-206ENST00000416004 ADARB2Q9NS39 739 aaKnown RBP11.36□□□□□ -0.59
CHRNA1-206ENST00000416004 POLLQ9UGP5 575 aa11.36□□□□□ -0.59
CHRNA1-206ENST00000416004 RPS12P25398 132 aaKnown RBP11.35□□□□□ -0.59
CHRNA1-206ENST00000416004 RFX5P48382 616 aaPredicted RBP11.35□□□□□ -0.59
CHRNA1-206ENST00000416004 GPRC5DQ9NZD1 345 aa11.35□□□□□ -0.59
CHRNA1-206ENST00000416004 NOP58Q9Y2X3 529 aaKnown RBP11.35□□□□□ -0.59
CHRNA1-206ENST00000416004 LRRCC1Q9C099 1032 aa11.34□□□□□ -0.59
CHRNA1-206ENST00000416004 LEMD3Q9Y2U8 911 aa11.34□□□□□ -0.59
CHRNA1-206ENST00000416004 DUOX1Q9NRD9 1551 aa11.34□□□□□ -0.59
CHRNA1-206ENST00000416004 COL4A5P29400 1685 aa11.34□□□□□ -0.59
CHRNA1-206ENST00000416004 CSF1RP07333 972 aa11.34□□□□□ -0.59
CHRNA1-206ENST00000416004 GMPSP49915 693 aaPredicted RBP11.34□□□□□ -0.59
CHRNA1-206ENST00000416004 DOK7Q18PE1 504 aa11.34□□□□□ -0.59
CHRNA1-206ENST00000416004 FAM161AQ3B820 660 aa11.34□□□□□ -0.59
CHRNA1-206ENST00000416004 MINPP1Q9UNW1 487 aa11.34□□□□□ -0.59
CHRNA1-206ENST00000416004 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.34□□□□□ -0.59
CHRNA1-206ENST00000416004 LTBP1Q14766 1721 aa11.33□□□□□ -0.6
CHRNA1-206ENST00000416004 EPS15P42566 896 aa11.33□□□□□ -0.6
CHRNA1-206ENST00000416004 SCNN1DP51172 638 aa11.33□□□□□ -0.6
CHRNA1-206ENST00000416004 PTPN12Q05209 780 aaKnown RBP11.33□□□□□ -0.6
CHRNA1-206ENST00000416004 PODNQ7Z5L7 613 aa11.33□□□□□ -0.6
CHRNA1-206ENST00000416004 SLC51AQ86UW1 340 aa11.33□□□□□ -0.6
CHRNA1-206ENST00000416004 PLEKHM2Q8IWE5 1019 aa11.33□□□□□ -0.6
CHRNA1-206ENST00000416004 RHPN1Q8TCX5 695 aa11.33□□□□□ -0.6
CHRNA1-206ENST00000416004 DPF2Q92785 391 aa11.33□□□□□ -0.6
CHRNA1-206ENST00000416004 SIL1Q9H173 461 aa11.33□□□□□ -0.6
CHRNA1-206ENST00000416004 IL1RAPL2Q9NP60 686 aa11.33□□□□□ -0.6
CHRNA1-206ENST00000416004 CNNM1Q9NRU3 951 aa11.33□□□□□ -0.6
CHRNA1-206ENST00000416004 MED23Q9ULK4 1368 aa11.32□□□□□ -0.6
CHRNA1-206ENST00000416004 RAB11FIP3O75154 756 aa11.32□□□□□ -0.6
CHRNA1-206ENST00000416004 C8orf34Q49A92 452 aa11.32□□□□□ -0.6
CHRNA1-206ENST00000416004 CNTROBQ8N137 903 aa11.32□□□□□ -0.6
CHRNA1-206ENST00000416004 COPRSQ9NQ92 184 aa11.32□□□□□ -0.6
CHRNA1-206ENST00000416004 CREBZFQ9NS37 354 aa11.32□□□□□ -0.6
CHRNA1-206ENST00000416004 CNOT7Q9UIV1 285 aaKnown RBP11.32□□□□□ -0.6
CHRNA1-206ENST00000416004 PSMD14O00487 310 aa11.32□□□□□ -0.6
CHRNA1-206ENST00000416004 SASH1O94885 1247 aa11.32□□□□□ -0.6
CHRNA1-206ENST00000416004 POTEIP0CG38 1075 aa11.32□□□□□ -0.6
CHRNA1-206ENST00000416004 POTEJP0CG39 1038 aa11.32□□□□□ -0.6
CHRNA1-206ENST00000416004 LDHAL6AQ6ZMR3 332 aa11.32□□□□□ -0.6
CHRNA1-206ENST00000416004 FBXW7Q969H0 707 aa11.32□□□□□ -0.6
CHRNA1-206ENST00000416004 SALL3Q9BXA9 1300 aa11.31□□□□□ -0.6
CHRNA1-206ENST00000416004 TMEM88BA6NKF7 163 aa11.31□□□□□ -0.6
CHRNA1-206ENST00000416004 YDJCA8MPS7 323 aa11.31□□□□□ -0.6
CHRNA1-206ENST00000416004 OS9Q13438 667 aaPredicted RBP11.31□□□□□ -0.6
CHRNA1-206ENST00000416004 MAP1SQ66K74 1059 aaPredicted RBP11.31□□□□□ -0.6
CHRNA1-206ENST00000416004 MICALL2Q8IY33 904 aa11.31□□□□□ -0.6
CHRNA1-206ENST00000416004 PIAS4Q8N2W9 510 aaPredicted RBP11.31□□□□□ -0.6
CHRNA1-206ENST00000416004 ZC3H15Q8WU90 426 aaKnown RBP11.31□□□□□ -0.6
CHRNA1-206ENST00000416004 KLRG1Q96E93 195 aa11.31□□□□□ -0.6
CHRNA1-206ENST00000416004 KIF1BPQ96EK5 621 aa11.31□□□□□ -0.6
CHRNA1-206ENST00000416004 BACH2Q9BYV9 841 aa11.31□□□□□ -0.6
CHRNA1-206ENST00000416004 COA1Q9GZY4 146 aa11.31□□□□□ -0.6
CHRNA1-206ENST00000416004 ZBTB47Q9UFB7 747 aaPredicted RBP11.31□□□□□ -0.6
CHRNA1-206ENST00000416004 ZNF804BA4D1E1 1349 aa11.31□□□□□ -0.6
CHRNA1-206ENST00000416004 ADAMTSL1Q8N6G6 1762 aa11.3□□□□□ -0.6
CHRNA1-206ENST00000416004 PSME4Q14997 1843 aa11.3□□□□□ -0.6
CHRNA1-206ENST00000416004 USP17L3A6NCW0 530 aa11.3□□□□□ -0.6
CHRNA1-206ENST00000416004 USP17L4A6NCW7 530 aa11.3□□□□□ -0.6
CHRNA1-206ENST00000416004 CHRNDQ07001 517 aa11.3□□□□□ -0.6
CHRNA1-206ENST00000416004 HSP90AB4PQ58FF6 505 aa11.3□□□□□ -0.6
CHRNA1-206ENST00000416004 TSHZ3Q63HK5 1081 aa11.3□□□□□ -0.6
CHRNA1-206ENST00000416004 USP17L1Q7RTZ2 530 aa11.3□□□□□ -0.6
CHRNA1-206ENST00000416004 AGBL3Q8NEM8 1001 aa11.3□□□□□ -0.6
CHRNA1-206ENST00000416004 ZNF594Q96JF6 807 aaPredicted RBP11.3□□□□□ -0.6
CHRNA1-206ENST00000416004 GPR101Q96P66 508 aaPredicted RBP11.3□□□□□ -0.6
CHRNA1-206ENST00000416004 MYO3BQ8WXR4 1341 aa11.3□□□□□ -0.6
CHRNA1-206ENST00000416004 TRPM7Q96QT4 1865 aa11.3□□□□□ -0.6
CHRNA1-206ENST00000416004 GSPT1P15170 499 aaKnown RBP11.29□□□□□ -0.6
CHRNA1-206ENST00000416004 G3BP1Q13283 466 aaKnown RBP eCLIP11.29□□□□□ -0.6
CHRNA1-206ENST00000416004 ZNF804AQ7Z570 1209 aa11.29□□□□□ -0.6
CHRNA1-206ENST00000416004 OGFOD1Q8N543 542 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms