RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 POLR3AO14802 1390 aaPredicted RBP14.68□□□□□ -0.06
RNF43-201ENST00000407977 AKR1B15C9JRZ8 316 aaPredicted RBP14.68□□□□□ -0.06
RNF43-201ENST00000407977 FAM160A1Q05DH4 1040 aa14.68□□□□□ -0.06
RNF43-201ENST00000407977 CRNKL1Q9BZJ0 848 aaKnown RBP14.68□□□□□ -0.06
RNF43-201ENST00000407977 MMRN2Q9H8L6 949 aa14.68□□□□□ -0.06
RNF43-201ENST00000407977 IMPACTQ9P2X3 320 aa14.68□□□□□ -0.06
RNF43-201ENST00000407977 TTF2Q9UNY4 1162 aaKnown RBP14.68□□□□□ -0.06
RNF43-201ENST00000407977 LZTFL1Q9NQ48 299 aa14.68□□□□□ -0.06
RNF43-201ENST00000407977 ATP5DP30049 168 aa14.68□□□□□ -0.06
RNF43-201ENST00000407977 ASIC1P78348 528 aa14.68□□□□□ -0.06
RNF43-201ENST00000407977 MPRIPQ6WCQ1 1025 aa14.68□□□□□ -0.06
RNF43-201ENST00000407977 CROCCP2Q86T23 111 aa14.68□□□□□ -0.06
RNF43-201ENST00000407977 KLHL34Q8N239 644 aa14.68□□□□□ -0.06
RNF43-201ENST00000407977 SELENOSQ9BQE4 189 aa14.68□□□□□ -0.06
RNF43-201ENST00000407977 USP26Q9BXU7 913 aa14.68□□□□□ -0.06
RNF43-201ENST00000407977 PUF60Q9UHX1 559 aaKnown RBP14.68□□□□□ -0.06
RNF43-201ENST00000407977 RHOXF2BP0C7M4 288 aa14.67□□□□□ -0.06
RNF43-201ENST00000407977 MARCKSP29966 332 aaPredicted RBP14.67□□□□□ -0.06
RNF43-201ENST00000407977 KRBA2Q6ZNG9 492 aa14.67□□□□□ -0.06
RNF43-201ENST00000407977 UBE3BQ7Z3V4 1068 aa14.67□□□□□ -0.06
RNF43-201ENST00000407977 NEK11Q8NG66 645 aa14.67□□□□□ -0.06
RNF43-201ENST00000407977 RHOXF2Q9BQY4 288 aa14.67□□□□□ -0.06
RNF43-201ENST00000407977 PAIP2Q9BPZ3 127 aaKnown RBP14.67□□□□□ -0.06
RNF43-201ENST00000407977 SWAP70Q9UH65 585 aa14.67□□□□□ -0.06
RNF43-201ENST00000407977 UBXN1Q04323 297 aa14.67□□□□□ -0.06
RNF43-201ENST00000407977 KARSQ15046 597 aaKnown RBP14.67□□□□□ -0.06
RNF43-201ENST00000407977 CCDC110Q8TBZ0 833 aa14.67□□□□□ -0.06
RNF43-201ENST00000407977 LRRC45Q96CN5 670 aa14.67□□□□□ -0.06
RNF43-201ENST00000407977 SCLT1Q96NL6 688 aa14.67□□□□□ -0.06
RNF43-201ENST00000407977 MAGI1Q96QZ7 1491 aaPredicted RBP14.67□□□□□ -0.06
RNF43-201ENST00000407977 PCF11O94913 1555 aaKnown RBP14.67□□□□□ -0.06
RNF43-201ENST00000407977 PHACTR2O75167 634 aa14.67□□□□□ -0.06
RNF43-201ENST00000407977 ZC3H6P61129 1189 aaKnown RBP14.67□□□□□ -0.06
RNF43-201ENST00000407977 DNAJC21Q5F1R6 531 aaKnown RBP14.67□□□□□ -0.06
RNF43-201ENST00000407977 CEP128Q6ZU80 1094 aa14.67□□□□□ -0.06
RNF43-201ENST00000407977 UTP14AQ9BVJ6 771 aaKnown RBP14.67□□□□□ -0.06
RNF43-201ENST00000407977 ELP1O95163 1332 aa14.67□□□□□ -0.06
RNF43-201ENST00000407977 ALDH3A1P30838 453 aa14.67□□□□□ -0.06
RNF43-201ENST00000407977 RUFY3Q7L099 469 aa14.67□□□□□ -0.06
RNF43-201ENST00000407977 RBSNQ9H1K0 784 aa14.67□□□□□ -0.06
RNF43-201ENST00000407977 KIAA0586Q9BVV6 1533 aa14.67□□□□□ -0.06
RNF43-201ENST00000407977 GIGYF1O75420 1035 aaPredicted RBP14.66□□□□□ -0.06
RNF43-201ENST00000407977 SNRKQ9NRH2 765 aa14.66□□□□□ -0.06
RNF43-201ENST00000407977 ZBTB40Q9NUA8 1239 aa14.66□□□□□ -0.06
RNF43-201ENST00000407977 ANKIB1Q9P2G1 1089 aa14.66□□□□□ -0.06
RNF43-201ENST00000407977 IL15P40933 162 aaPredicted RBP14.66□□□□□ -0.06
RNF43-201ENST00000407977 IFIT1BQ5T764 474 aaKnown RBP14.66□□□□□ -0.06
RNF43-201ENST00000407977 IQUBQ8NA54 791 aa14.66□□□□□ -0.06
RNF43-201ENST00000407977 DHX58Q96C10 678 aa14.66□□□□□ -0.06
RNF43-201ENST00000407977 TRIM7Q9C029 511 aa14.66□□□□□ -0.06
RNF43-201ENST00000407977 C14orf93Q9H972 538 aaKnown RBP14.66□□□□□ -0.06
RNF43-201ENST00000407977 RRAGDQ9NQL2 400 aaPredicted RBP14.66□□□□□ -0.06
RNF43-201ENST00000407977 CDK13Q14004 1512 aaKnown RBP14.66□□□□□ -0.06
RNF43-201ENST00000407977 WAPLQ7Z5K2 1190 aa14.66□□□□□ -0.06
RNF43-201ENST00000407977 GTF3C6Q969F1 213 aa14.66□□□□□ -0.06
RNF43-201ENST00000407977 ARHGAP25P42331 645 aa14.66□□□□□ -0.06
RNF43-201ENST00000407977 DHX32Q7L7V1 743 aaKnown RBP14.66□□□□□ -0.06
RNF43-201ENST00000407977 ZGPATQ8N5A5 531 aaKnown RBP14.66□□□□□ -0.06
RNF43-201ENST00000407977 CCDC26Q8TAB7 109 aa14.66□□□□□ -0.06
RNF43-201ENST00000407977 NAP1L3Q99457 506 aaPredicted RBP14.66□□□□□ -0.06
RNF43-201ENST00000407977 NAPGQ99747 312 aaPredicted RBP14.66□□□□□ -0.06
RNF43-201ENST00000407977 MKRN1Q9UHC7 482 aaKnown RBP14.66□□□□□ -0.06
RNF43-201ENST00000407977 RTL9Q8NET4 1388 aa14.66□□□□□ -0.06
RNF43-201ENST00000407977 GSTO1P78417 241 aa14.65□□□□□ -0.06
RNF43-201ENST00000407977 MTUS1Q9ULD2 1270 aa14.65□□□□□ -0.06
RNF43-201ENST00000407977 POGZQ7Z3K3 1410 aa14.65□□□□□ -0.06
RNF43-201ENST00000407977 NUP160Q12769 1436 aa14.65□□□□□ -0.06
RNF43-201ENST00000407977 ADGRF5Q8IZF2 1346 aa14.65□□□□□ -0.06
RNF43-201ENST00000407977 SNRPA1P09661 255 aaKnown RBP14.65□□□□□ -0.06
RNF43-201ENST00000407977 BICDL1Q6ZP65 573 aa14.65□□□□□ -0.06
RNF43-201ENST00000407977 RIOK3O14730 519 aaKnown RBP14.65□□□□□ -0.06
RNF43-201ENST00000407977 ZPR1O75312 459 aa14.65□□□□□ -0.06
RNF43-201ENST00000407977 HSP90AA4PQ58FG1 418 aa14.65□□□□□ -0.06
RNF43-201ENST00000407977 CREB3L3Q68CJ9 461 aa14.65□□□□□ -0.06
RNF43-201ENST00000407977 WDR66Q8TBY9 1149 aa14.65□□□□□ -0.06
RNF43-201ENST00000407977 CAPZA3Q96KX2 299 aa14.65□□□□□ -0.06
RNF43-201ENST00000407977 CPSF2Q9P2I0 782 aaKnown RBP14.65□□□□□ -0.06
RNF43-201ENST00000407977 SOS1Q07889 1333 aaPredicted RBP14.65□□□□□ -0.06
RNF43-201ENST00000407977 CCDC160A6NGH7 325 aa14.65□□□□□ -0.06
RNF43-201ENST00000407977 ATP2A2P16615 1042 aaKnown RBP14.65□□□□□ -0.06
RNF43-201ENST00000407977 CALCOCO2Q13137 446 aa14.65□□□□□ -0.06
RNF43-201ENST00000407977 SEPT6Q14141 434 aa14.65□□□□□ -0.06
RNF43-201ENST00000407977 CCDC122Q5T0U0 273 aa14.65□□□□□ -0.06
RNF43-201ENST00000407977 ANKRD13DQ6ZTN6 518 aa14.65□□□□□ -0.06
RNF43-201ENST00000407977 PLEKHM2Q8IWE5 1019 aa14.65□□□□□ -0.06
RNF43-201ENST00000407977 ANAPC4Q9UJX5 808 aa14.65□□□□□ -0.06
RNF43-201ENST00000407977 U2AF2P26368 475 aaKnown RBP eCLIP14.64□□□□□ -0.071e-8■■□□□ 13.9
RNF43-201ENST00000407977 PTPDC1A2A3K4 754 aa14.64□□□□□ -0.07
RNF43-201ENST00000407977 NDUFAB1O14561 156 aa14.64□□□□□ -0.07
RNF43-201ENST00000407977 GNAT2P19087 354 aa14.64□□□□□ -0.07
RNF43-201ENST00000407977 IFNL2Q8IZJ0 200 aa14.64□□□□□ -0.07
RNF43-201ENST00000407977 CHMLP26374 656 aa14.64□□□□□ -0.07
RNF43-201ENST00000407977 INPP5BP32019 993 aa14.64□□□□□ -0.07
RNF43-201ENST00000407977 SF3B2Q13435 895 aaKnown RBP14.64□□□□□ -0.07
RNF43-201ENST00000407977 IFT81Q8WYA0 676 aa14.64□□□□□ -0.07
RNF43-201ENST00000407977 TCEANC2Q96MN5 208 aa14.64□□□□□ -0.07
RNF43-201ENST00000407977 COMMD10Q9Y6G5 202 aa14.64□□□□□ -0.07
RNF43-201ENST00000407977 NOL3O60936 208 aaKnown RBP14.64□□□□□ -0.07
RNF43-201ENST00000407977 HLA-DOAP06340 250 aa14.64□□□□□ -0.07
RNF43-201ENST00000407977 CHMP4BP1P59074 171 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms