RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 DPF2Q92785 391 aa9.31□□□□□ -0.92
USP16-204ENST00000399976 CEP126Q9P2H0 1117 aa9.31□□□□□ -0.92
USP16-204ENST00000399976 AOX1Q06278 1338 aa9.31□□□□□ -0.92
USP16-204ENST00000399976 AK9Q5TCS8 1911 aa9.31□□□□□ -0.92
USP16-204ENST00000399976 TRPM7Q96QT4 1865 aa9.31□□□□□ -0.92
USP16-204ENST00000399976 MAP4K4O95819 1239 aaPredicted RBP9.3□□□□□ -0.92
USP16-204ENST00000399976 NIM1KQ8IY84 436 aa9.3□□□□□ -0.92
USP16-204ENST00000399976 TDRD7Q8NHU6 1098 aaKnown RBP9.3□□□□□ -0.92
USP16-204ENST00000399976 KDM2BQ8NHM5 1336 aa9.3□□□□□ -0.92
USP16-204ENST00000399976 PLIN1O60240 522 aa9.3□□□□□ -0.92
USP16-204ENST00000399976 UFL1O94874 794 aa9.3□□□□□ -0.92
USP16-204ENST00000399976 ARID4AP29374 1257 aaPredicted RBP9.3□□□□□ -0.92
USP16-204ENST00000399976 PRELPP51888 382 aa9.3□□□□□ -0.92
USP16-204ENST00000399976 HDLBPQ00341 1268 aaKnown RBP9.3□□□□□ -0.92
USP16-204ENST00000399976 STRIP1Q5VSL9 837 aa9.3□□□□□ -0.92
USP16-204ENST00000399976 SMC5Q8IY18 1101 aa9.3□□□□□ -0.92
USP16-204ENST00000399976 JDP2Q8WYK2 163 aa9.3□□□□□ -0.92
USP16-204ENST00000399976 CRBNQ96SW2 442 aa9.3□□□□□ -0.92
USP16-204ENST00000399976 CDK5RAP2Q96SN8 1893 aa9.3□□□□□ -0.92
USP16-204ENST00000399976 GLTPD2A6NH11 291 aa9.3□□□□□ -0.92
USP16-204ENST00000399976 VIL1P09327 827 aaKnown RBP9.3□□□□□ -0.92
USP16-204ENST00000399976 METTL24Q5JXM2 366 aa9.3□□□□□ -0.92
USP16-204ENST00000399976 MTMR14Q8NCE2 650 aa9.3□□□□□ -0.92
USP16-204ENST00000399976 TBC1D22AQ8WUA7 517 aa9.3□□□□□ -0.92
USP16-204ENST00000399976 JARID2Q92833 1246 aaPredicted RBP9.3□□□□□ -0.92
USP16-204ENST00000399976 ZC3H12CQ9C0D7 883 aaKnown RBP9.3□□□□□ -0.92
USP16-204ENST00000399976 ANKIB1Q9P2G1 1089 aa9.3□□□□□ -0.92
USP16-204ENST00000399976 RFX7Q2KHR2 1363 aa9.3□□□□□ -0.92
USP16-204ENST00000399976 UQCRFS1P1P0C7P4 283 aa9.29□□□□□ -0.92
USP16-204ENST00000399976 RTL5Q5HYW3 569 aaPredicted RBP9.29□□□□□ -0.92
USP16-204ENST00000399976 C9orf131Q5VYM1 1079 aa9.29□□□□□ -0.92
USP16-204ENST00000399976 COL2A1P02458 1487 aaPredicted RBP9.29□□□□□ -0.92
USP16-204ENST00000399976 DDX60LQ5H9U9 1706 aaKnown RBP9.29□□□□□ -0.92
USP16-204ENST00000399976 PAPPA2Q9BXP8 1791 aa9.29□□□□□ -0.92
USP16-204ENST00000399976 PPIP5K2O43314 1243 aa9.29□□□□□ -0.92
USP16-204ENST00000399976 LRRC24Q50LG9 513 aa9.29□□□□□ -0.92
USP16-204ENST00000399976 ZGPATQ8N5A5 531 aaKnown RBP9.29□□□□□ -0.92
USP16-204ENST00000399976 RWDD1Q9H446 243 aaPredicted RBP9.29□□□□□ -0.92
USP16-204ENST00000399976 TAOK2Q9UL54 1235 aa9.29□□□□□ -0.92
USP16-204ENST00000399976 NSFL1CQ9UNZ2 370 aaKnown RBP9.29□□□□□ -0.92
USP16-204ENST00000399976 CHMP3Q9Y3E7 222 aa9.29□□□□□ -0.92
USP16-204ENST00000399976 SUPT16HQ9Y5B9 1047 aaKnown RBP9.29□□□□□ -0.92
USP16-204ENST00000399976 MAST3O60307 1309 aa9.28□□□□□ -0.92
USP16-204ENST00000399976 SASH1O94885 1247 aa9.28□□□□□ -0.92
USP16-204ENST00000399976 EIF6P56537 245 aaKnown RBP9.28□□□□□ -0.92
USP16-204ENST00000399976 ATP2B3Q16720 1220 aa9.28□□□□□ -0.92
USP16-204ENST00000399976 CAVIN4Q5BKX8 364 aa9.28□□□□□ -0.92
USP16-204ENST00000399976 GNL3LQ9NVN8 582 aaKnown RBP9.28□□□□□ -0.92
USP16-204ENST00000399976 ZNF280AP59817 542 aaPredicted RBP9.28□□□□□ -0.92
USP16-204ENST00000399976 RASSF7Q02833 373 aa9.28□□□□□ -0.92
USP16-204ENST00000399976 LARGE2Q8N3Y3 721 aa9.28□□□□□ -0.92
USP16-204ENST00000399976 ZNF594Q96JF6 807 aaPredicted RBP9.28□□□□□ -0.92
USP16-204ENST00000399976 GMLQ99445 158 aa9.28□□□□□ -0.92
USP16-204ENST00000399976 PUS3Q9BZE2 481 aaKnown RBP9.28□□□□□ -0.92
USP16-204ENST00000399976 RNF181Q9P0P0 153 aa9.28□□□□□ -0.92
USP16-204ENST00000399976 IQCA1LA6NCM1 817 aa9.27□□□□□ -0.92
USP16-204ENST00000399976 ECE2O60344 883 aa9.27□□□□□ -0.92
USP16-204ENST00000399976 TNNI3KQ59H18 835 aa9.27□□□□□ -0.92
USP16-204ENST00000399976 DPY19L2Q6NUT2 758 aa9.27□□□□□ -0.92
USP16-204ENST00000399976 CERS3Q8IU89 383 aa9.27□□□□□ -0.92
USP16-204ENST00000399976 DENND2AQ9ULE3 1009 aa9.27□□□□□ -0.92
USP16-204ENST00000399976 FPGT-TNNI3KV9GXZ4 949 aa9.27□□□□□ -0.92
USP16-204ENST00000399976 MYH2Q9UKX2 1941 aa9.27□□□□□ -0.92
USP16-204ENST00000399976 TTC41PQ6P2S7 1318 aa9.27□□□□□ -0.93
USP16-204ENST00000399976 KCNJ4P48050 445 aa9.27□□□□□ -0.93
USP16-204ENST00000399976 RHPN1Q8TCX5 695 aa9.27□□□□□ -0.93
USP16-204ENST00000399976 FAM84BQ96KN1 310 aaPredicted RBP9.27□□□□□ -0.93
USP16-204ENST00000399976 CD209Q9NNX6 404 aa9.27□□□□□ -0.93
USP16-204ENST00000399976 PGAP2Q9UHJ9 254 aa9.27□□□□□ -0.93
USP16-204ENST00000399976 SALL3Q9BXA9 1300 aa9.27□□□□□ -0.93
USP16-204ENST00000399976 PITPNM2Q9BZ72 1349 aa9.27□□□□□ -0.93
USP16-204ENST00000399976 HIBADHP31937 336 aaKnown RBP9.27□□□□□ -0.93
USP16-204ENST00000399976 CIAPIN1Q6FI81 312 aa9.27□□□□□ -0.93
USP16-204ENST00000399976 PCDHB15Q9Y5E8 787 aa9.27□□□□□ -0.93
USP16-204ENST00000399976 USP17L3A6NCW0 530 aa9.26□□□□□ -0.93
USP16-204ENST00000399976 USP17L4A6NCW7 530 aa9.26□□□□□ -0.93
USP16-204ENST00000399976 C6orf229H3BNL8 230 aa9.26□□□□□ -0.93
USP16-204ENST00000399976 SURF6O75683 361 aaKnown RBP9.26□□□□□ -0.93
USP16-204ENST00000399976 AOC3Q16853 763 aa9.26□□□□□ -0.93
USP16-204ENST00000399976 USP17L1Q7RTZ2 530 aa9.26□□□□□ -0.93
USP16-204ENST00000399976 WDR66Q8TBY9 1149 aa9.26□□□□□ -0.93
USP16-204ENST00000399976 LRRCC1Q9C099 1032 aa9.26□□□□□ -0.93
USP16-204ENST00000399976 ZNF277Q9NRM2 450 aaPredicted RBP9.26□□□□□ -0.93
USP16-204ENST00000399976 THSD7BQ9C0I4 1608 aa9.26□□□□□ -0.93
USP16-204ENST00000399976 DACT2Q5SW24 774 aa9.26□□□□□ -0.93
USP16-204ENST00000399976 RSBN1LQ6PCB5 846 aaPredicted RBP9.26□□□□□ -0.93
USP16-204ENST00000399976 ZC3H15Q8WU90 426 aaKnown RBP9.26□□□□□ -0.93
USP16-204ENST00000399976 OSBPL3Q9H4L5 887 aa9.26□□□□□ -0.93
USP16-204ENST00000399976 MYO5AQ9Y4I1 1855 aaKnown RBP9.26□□□□□ -0.93
USP16-204ENST00000399976 RPAP1Q9BWH6 1393 aaPredicted RBP9.26□□□□□ -0.93
USP16-204ENST00000399976 A0A1B0GUL7 405 aa9.25□□□□□ -0.93
USP16-204ENST00000399976 YDJCA8MPS7 323 aa9.25□□□□□ -0.93
USP16-204ENST00000399976 TFCP2Q12800 502 aa9.25□□□□□ -0.93
USP16-204ENST00000399976 USP50Q70EL3 339 aaPredicted RBP9.25□□□□□ -0.93
USP16-204ENST00000399976 CLASRPQ8N2M8 674 aaKnown RBP9.25□□□□□ -0.93
USP16-204ENST00000399976 STAP2Q9UGK3 403 aa9.25□□□□□ -0.93
USP16-204ENST00000399976 FAM163AQ96GL9 167 aaPredicted RBP9.25□□□□□ -0.93
USP16-204ENST00000399976 ZBED3Q96IU2 234 aaPredicted RBP9.25□□□□□ -0.93
USP16-204ENST00000399976 NPM3O75607 178 aaKnown RBP9.24□□□□□ -0.93
USP16-204ENST00000399976 SPTY2D1Q68D10 685 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms