RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 NDUFB9Q9Y6M9 179 aa20.21■□□□□ 0.83
EWSR1-206ENST00000397938 SIPA1L3O60292 1781 aaPredicted RBP20.21■□□□□ 0.83
EWSR1-206ENST00000397938 NPHP1O15259 732 aa20.21■□□□□ 0.83
EWSR1-206ENST00000397938 EPHA10Q5JZY3 1008 aa20.21■□□□□ 0.83
EWSR1-206ENST00000397938 SYT10Q6XYQ8 523 aa20.21■□□□□ 0.83
EWSR1-206ENST00000397938 COPRSQ9NQ92 184 aa20.21■□□□□ 0.83
EWSR1-206ENST00000397938 PCDHA7Q9UN72 937 aa20.21■□□□□ 0.83
EWSR1-206ENST00000397938 TUBB4AP04350 444 aa20.2■□□□□ 0.82
EWSR1-206ENST00000397938 TMC6Q7Z403 805 aa20.2■□□□□ 0.82
EWSR1-206ENST00000397938 LRRN4CLQ8ND94 238 aa20.2■□□□□ 0.82
EWSR1-206ENST00000397938 SFPQP23246 707 aaKnown RBP eCLIP20.2■□□□□ 0.82
EWSR1-206ENST00000397938 DHX8Q14562 1220 aaKnown RBP20.2■□□□□ 0.82
EWSR1-206ENST00000397938 DPCR1Q3MIW9 517 aa20.2■□□□□ 0.82
EWSR1-206ENST00000397938 AMOTQ4VCS5 1084 aa20.2■□□□□ 0.82
EWSR1-206ENST00000397938 SDF4Q9BRK5 362 aa20.2■□□□□ 0.82
EWSR1-206ENST00000397938 A0A1W2PQ27 194 aa20.2■□□□□ 0.82
EWSR1-206ENST00000397938 A0A1W2PQ64 194 aa20.2■□□□□ 0.82
EWSR1-206ENST00000397938 A0A1W2PQD8 194 aa20.2■□□□□ 0.82
EWSR1-206ENST00000397938 NEURL1BA8MQ27 555 aa20.2■□□□□ 0.82
EWSR1-206ENST00000397938 SMC2O95347 1197 aa20.2■□□□□ 0.82
EWSR1-206ENST00000397938 PDIA6Q15084 440 aa20.2■□□□□ 0.82
EWSR1-206ENST00000397938 C1orf141Q5JVX7 400 aa20.2■□□□□ 0.82
EWSR1-206ENST00000397938 ADALQ6DHV7 355 aa20.2■□□□□ 0.82
EWSR1-206ENST00000397938 DNAJC2Q99543 621 aaKnown RBP20.2■□□□□ 0.82
EWSR1-206ENST00000397938 IFNKQ9P0W0 207 aa20.2■□□□□ 0.82
EWSR1-206ENST00000397938 KIAA1468Q9P260 1216 aa20.2■□□□□ 0.82
EWSR1-206ENST00000397938 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.2■□□□□ 0.822e-8■■■■□ 19.6
EWSR1-206ENST00000397938 FHOD1Q9Y613 1164 aa20.2■□□□□ 0.82
EWSR1-206ENST00000397938 SH3TC1Q8TE82 1336 aa20.19■□□□□ 0.82
EWSR1-206ENST00000397938 CLCN6P51797 869 aa20.19■□□□□ 0.82
EWSR1-206ENST00000397938 CCT2P78371 535 aaKnown RBP20.19■□□□□ 0.82
EWSR1-206ENST00000397938 EXOSC10Q01780 885 aaKnown RBP20.19■□□□□ 0.82
EWSR1-206ENST00000397938 PLPPR3Q6T4P5 718 aa20.19■□□□□ 0.82
EWSR1-206ENST00000397938 HAUS7Q99871 368 aa20.19■□□□□ 0.82
EWSR1-206ENST00000397938 RTEL1Q9NZ71 1219 aa20.19■□□□□ 0.82
EWSR1-206ENST00000397938 GUCY1B3Q02153 619 aa20.19■□□□□ 0.82
EWSR1-206ENST00000397938 TFCP2Q12800 502 aa20.19■□□□□ 0.82
EWSR1-206ENST00000397938 CYB5RLQ6IPT4 315 aa20.19■□□□□ 0.82
EWSR1-206ENST00000397938 RIC3Q7Z5B4 369 aa20.19■□□□□ 0.82
EWSR1-206ENST00000397938 LRRC59Q96AG4 307 aaKnown RBP20.19■□□□□ 0.82
EWSR1-206ENST00000397938 NCOA5Q9HCD5 579 aaKnown RBP20.19■□□□□ 0.82
EWSR1-206ENST00000397938 NEDD4P46934 1319 aa20.19■□□□□ 0.82
EWSR1-206ENST00000397938 ARHGAP23Q9P227 1491 aa20.18■□□□□ 0.82
EWSR1-206ENST00000397938 PHRF1Q9P1Y6 1649 aaKnown RBP20.18■□□□□ 0.82
EWSR1-206ENST00000397938 A0A1B0GVL5 298 aa20.18■□□□□ 0.82
EWSR1-206ENST00000397938 NDUFA8P51970 172 aa20.18■□□□□ 0.82
EWSR1-206ENST00000397938 GCKRQ14397 625 aa20.18■□□□□ 0.82
EWSR1-206ENST00000397938 NOL10Q9BSC4 688 aaKnown RBP20.18■□□□□ 0.82
EWSR1-206ENST00000397938 TMEM51Q9NW97 253 aa20.18■□□□□ 0.82
EWSR1-206ENST00000397938 CARMIL3Q8ND23 1372 aa20.18■□□□□ 0.82
EWSR1-206ENST00000397938 RFX5P48382 616 aaPredicted RBP20.18■□□□□ 0.82
EWSR1-206ENST00000397938 TIGD1Q96MW7 591 aa20.18■□□□□ 0.82
EWSR1-206ENST00000397938 NRDCO43847 1150 aa20.17■□□□□ 0.82
EWSR1-206ENST00000397938 NEXNQ0ZGT2 675 aa20.17■□□□□ 0.82
EWSR1-206ENST00000397938 DDX46Q7L014 1031 aaKnown RBP20.17■□□□□ 0.82
EWSR1-206ENST00000397938 ERICH4A6NGS2 130 aa20.17■□□□□ 0.82
EWSR1-206ENST00000397938 ZRSR1Q15695 479 aaKnown RBP20.17■□□□□ 0.82
EWSR1-206ENST00000397938 DBNDD2Q9BQY9 259 aa20.17■□□□□ 0.82
EWSR1-206ENST00000397938 PTPN12Q05209 780 aaKnown RBP20.16■□□□□ 0.82
EWSR1-206ENST00000397938 ARHGAP29Q52LW3 1261 aa20.16■□□□□ 0.82
EWSR1-206ENST00000397938 KBTBD3Q8NAB2 608 aa20.16■□□□□ 0.82
EWSR1-206ENST00000397938 SYTL4Q96C24 671 aaPredicted RBP20.16■□□□□ 0.82
EWSR1-206ENST00000397938 CALCOCO1Q9P1Z2 691 aa20.16■□□□□ 0.82
EWSR1-206ENST00000397938 PHLPP2Q6ZVD8 1323 aa20.16■□□□□ 0.82
EWSR1-206ENST00000397938 PNMA6AP0CW24 399 aaPredicted RBP20.16■□□□□ 0.82
EWSR1-206ENST00000397938 TPM4P67936 248 aa20.16■□□□□ 0.82
EWSR1-206ENST00000397938 LINC00301Q8NCQ3 95 aa20.16■□□□□ 0.82
EWSR1-206ENST00000397938 PDIA3P30101 505 aaKnown RBP20.15■□□□□ 0.82
EWSR1-206ENST00000397938 CYP2C19P33261 490 aa20.15■□□□□ 0.82
EWSR1-206ENST00000397938 ZNF274Q96GC6 653 aaPredicted RBP20.15■□□□□ 0.82
EWSR1-206ENST00000397938 DSCC1Q9BVC3 393 aa20.15■□□□□ 0.82
EWSR1-206ENST00000397938 GTF2E1P29083 439 aaPredicted RBP20.15■□□□□ 0.82
EWSR1-206ENST00000397938 ETF1P62495 437 aaKnown RBP20.15■□□□□ 0.82
EWSR1-206ENST00000397938 NCAPHQ15003 741 aa20.15■□□□□ 0.82
EWSR1-206ENST00000397938 PALLDQ8WX93 1383 aa20.15■□□□□ 0.82
EWSR1-206ENST00000397938 PPFIA3O75145 1194 aa20.14■□□□□ 0.82
EWSR1-206ENST00000397938 NLRP12P59046 1061 aa20.14■□□□□ 0.82
EWSR1-206ENST00000397938 CCP110O43303 1012 aa20.14■□□□□ 0.81
EWSR1-206ENST00000397938 ZRANB2O95218 330 aaKnown RBP eCLIP20.14■□□□□ 0.81
EWSR1-206ENST00000397938 FDPSP14324 419 aaKnown RBP20.14■□□□□ 0.81
EWSR1-206ENST00000397938 PLA2G4AP47712 749 aa20.14■□□□□ 0.81
EWSR1-206ENST00000397938 KCNG4Q8TDN1 519 aa20.14■□□□□ 0.81
EWSR1-206ENST00000397938 BBXQ8WY36 941 aaPredicted RBP20.14■□□□□ 0.81
EWSR1-206ENST00000397938 C5P01031 1676 aa20.14■□□□□ 0.81
EWSR1-206ENST00000397938 STK38Q15208 465 aa20.13■□□□□ 0.81
EWSR1-206ENST00000397938 CHMP4CQ96CF2 233 aa20.13■□□□□ 0.81
EWSR1-206ENST00000397938 MYD88Q99836 296 aa20.13■□□□□ 0.81
EWSR1-206ENST00000397938 METTL22Q9BUU2 404 aaPredicted RBP20.13■□□□□ 0.81
EWSR1-206ENST00000397938 NAP1L2Q9ULW6 460 aaPredicted RBP20.13■□□□□ 0.81
EWSR1-206ENST00000397938 ADAMTS7Q9UKP4 1686 aa20.13■□□□□ 0.81
EWSR1-206ENST00000397938 E7EWF7 191 aa20.13■□□□□ 0.81
EWSR1-206ENST00000397938 ZBTB22O15209 634 aa20.13■□□□□ 0.81
EWSR1-206ENST00000397938 YEATS4O95619 227 aa20.13■□□□□ 0.81
EWSR1-206ENST00000397938 SLC3A2P08195 630 aaKnown RBP20.13■□□□□ 0.81
EWSR1-206ENST00000397938 HOMER1Q86YM7 354 aa20.13■□□□□ 0.81
EWSR1-206ENST00000397938 HELLSQ9NRZ9 838 aa20.13■□□□□ 0.81
EWSR1-206ENST00000397938 ORC3Q9UBD5 711 aaPredicted RBP20.13■□□□□ 0.81
EWSR1-206ENST00000397938 CLIC4Q9Y696 253 aa20.13■□□□□ 0.81
EWSR1-206ENST00000397938 IRX5P78411 483 aaPredicted RBP20.12■□□□□ 0.81
EWSR1-206ENST00000397938 SF3A1Q15459 793 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms