RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 PA2G4Q9UQ80 394 aaKnown RBP31.54■■■□□ 2.64
TSPAN4-207ENST00000397411 PDE8BO95263 885 aa31.53■■■□□ 2.64
TSPAN4-207ENST00000397411 GMPSP49915 693 aaPredicted RBP31.53■■■□□ 2.64
TSPAN4-207ENST00000397411 ZNF804AQ7Z570 1209 aa31.53■■■□□ 2.64
TSPAN4-207ENST00000397411 COPRSQ9NQ92 184 aa31.53■■■□□ 2.64
TSPAN4-207ENST00000397411 SCN4AP35499 1836 aa31.53■■■□□ 2.64
TSPAN4-207ENST00000397411 CIAO1O76071 339 aa31.52■■■□□ 2.64
TSPAN4-207ENST00000397411 ATP8B2P98198 1209 aa31.52■■■□□ 2.64
TSPAN4-207ENST00000397411 CEP126Q9P2H0 1117 aa31.52■■■□□ 2.64
TSPAN4-207ENST00000397411 A0A1B0GUL6 1792 aa31.52■■■□□ 2.64
TSPAN4-207ENST00000397411 EPHX2P34913 555 aa31.51■■■□□ 2.63
TSPAN4-207ENST00000397411 IL15P40933 162 aaPredicted RBP31.51■■■□□ 2.63
TSPAN4-207ENST00000397411 C15orf52Q6ZUT6 534 aaKnown RBP31.51■■■□□ 2.63
TSPAN4-207ENST00000397411 TAF1DQ9H5J8 278 aaPredicted RBP31.51■■■□□ 2.63
TSPAN4-207ENST00000397411 USP17L3A6NCW0 530 aa31.5■■■□□ 2.63
TSPAN4-207ENST00000397411 USP17L4A6NCW7 530 aa31.5■■■□□ 2.63
TSPAN4-207ENST00000397411 C1QTNF8P60827 252 aa31.5■■■□□ 2.63
TSPAN4-207ENST00000397411 EAPPQ56P03 285 aaPredicted RBP31.5■■■□□ 2.63
TSPAN4-207ENST00000397411 C20orf194Q5TEA3 1177 aa31.5■■■□□ 2.63
TSPAN4-207ENST00000397411 USP17L1Q7RTZ2 530 aa31.5■■■□□ 2.63
TSPAN4-207ENST00000397411 ZBTB12Q9Y330 459 aaPredicted RBP31.5■■■□□ 2.63
TSPAN4-207ENST00000397411 PNMA6EA0A0J9YXQ4 647 aa31.49■■■□□ 2.63
TSPAN4-207ENST00000397411 ATG9AQ7Z3C6 839 aa31.49■■■□□ 2.63
TSPAN4-207ENST00000397411 RBM46Q8TBY0 533 aaKnown RBP31.49■■■□□ 2.63
TSPAN4-207ENST00000397411 CLEC11AQ9Y240 323 aa31.49■■■□□ 2.63
TSPAN4-207ENST00000397411 EPS15P42566 896 aa31.48■■■□□ 2.63
TSPAN4-207ENST00000397411 SCNN1DP51172 638 aa31.48■■■□□ 2.63
TSPAN4-207ENST00000397411 G3BP1Q13283 466 aaKnown RBP eCLIP31.48■■■□□ 2.63
TSPAN4-207ENST00000397411 VPS37DQ86XT2 251 aa31.48■■■□□ 2.63
TSPAN4-207ENST00000397411 CD209Q9NNX6 404 aa31.48■■■□□ 2.63
TSPAN4-207ENST00000397411 GPRC5DQ9NZD1 345 aa31.48■■■□□ 2.63
TSPAN4-207ENST00000397411 H7C1D1 291 aa31.47■■■□□ 2.63
TSPAN4-207ENST00000397411 VIL1P09327 827 aaKnown RBP31.47■■■□□ 2.63
TSPAN4-207ENST00000397411 IFIT1P09914 478 aaKnown RBP31.47■■■□□ 2.63
TSPAN4-207ENST00000397411 PUM3Q15397 648 aaKnown RBP31.47■■■□□ 2.63
TSPAN4-207ENST00000397411 CAVIN4Q5BKX8 364 aa31.47■■■□□ 2.63
TSPAN4-207ENST00000397411 PNMA8AQ86V59 439 aaPredicted RBP31.47■■■□□ 2.63
TSPAN4-207ENST00000397411 CNOT7Q9UIV1 285 aaKnown RBP31.47■■■□□ 2.63
TSPAN4-207ENST00000397411 RPS12P25398 132 aaKnown RBP31.46■■■□□ 2.63
TSPAN4-207ENST00000397411 HIBADHP31937 336 aaKnown RBP31.46■■■□□ 2.63
TSPAN4-207ENST00000397411 VGLL2Q8N8G2 317 aa31.46■■■□□ 2.63
TSPAN4-207ENST00000397411 SCN9AQ15858 1988 aa31.45■■■□□ 2.63
TSPAN4-207ENST00000397411 SLC5A1P13866 664 aa31.45■■■□□ 2.63
TSPAN4-207ENST00000397411 GYG1P46976 350 aa31.45■■■□□ 2.63
TSPAN4-207ENST00000397411 RRP1P56182 461 aaKnown RBP31.45■■■□□ 2.63
TSPAN4-207ENST00000397411 TTLL5Q6EMB2 1281 aa31.45■■■□□ 2.63
TSPAN4-207ENST00000397411 SMC1BQ8NDV3 1235 aa31.45■■■□□ 2.63
TSPAN4-207ENST00000397411 DPF2Q92785 391 aa31.45■■■□□ 2.63
TSPAN4-207ENST00000397411 GTF2IP78347 998 aa31.44■■■□□ 2.62
TSPAN4-207ENST00000397411 OS9Q13438 667 aaPredicted RBP31.44■■■□□ 2.62
TSPAN4-207ENST00000397411 RSBN1LQ6PCB5 846 aaPredicted RBP31.44■■■□□ 2.62
TSPAN4-207ENST00000397411 STRIP1Q5VSL9 837 aa31.43■■■□□ 2.62
TSPAN4-207ENST00000397411 SSH3Q8TE77 659 aa31.43■■■□□ 2.62
TSPAN4-207ENST00000397411 LPIN2Q92539 896 aa31.43■■■□□ 2.62
TSPAN4-207ENST00000397411 FAM84BQ96KN1 310 aaPredicted RBP31.43■■■□□ 2.62
TSPAN4-207ENST00000397411 ADARB2Q9NS39 739 aaKnown RBP31.43■■■□□ 2.62
TSPAN4-207ENST00000397411 IRS2Q9Y4H2 1338 aa31.43■■■□□ 2.62
TSPAN4-207ENST00000397411 FRAT2O75474 233 aaPredicted RBP31.42■■■□□ 2.62
TSPAN4-207ENST00000397411 POLA2Q14181 598 aa31.42■■■□□ 2.62
TSPAN4-207ENST00000397411 ATP2B3Q16720 1220 aa31.42■■■□□ 2.62
TSPAN4-207ENST00000397411 MICALL2Q8IY33 904 aa31.42■■■□□ 2.62
TSPAN4-207ENST00000397411 AGBL3Q8NEM8 1001 aa31.42■■■□□ 2.62
TSPAN4-207ENST00000397411 ZBTB40Q9NUA8 1239 aa31.42■■■□□ 2.62
TSPAN4-207ENST00000397411 SURF6O75683 361 aaKnown RBP31.41■■■□□ 2.62
TSPAN4-207ENST00000397411 IL1R1P14778 569 aa31.41■■■□□ 2.62
TSPAN4-207ENST00000397411 FSTL1Q12841 308 aa31.41■■■□□ 2.62
TSPAN4-207ENST00000397411 CEP85Q6P2H3 762 aa31.41■■■□□ 2.62
TSPAN4-207ENST00000397411 USP50Q70EL3 339 aaPredicted RBP31.41■■■□□ 2.62
TSPAN4-207ENST00000397411 LDHDQ86WU2 507 aa31.4■■■□□ 2.62
TSPAN4-207ENST00000397411 AKAP2Q9Y2D5 859 aa31.4■■■□□ 2.62
TSPAN4-207ENST00000397411 FGFR2P21802 821 aa31.39■■■□□ 2.62
TSPAN4-207ENST00000397411 TFCP2Q12800 502 aa31.39■■■□□ 2.62
TSPAN4-207ENST00000397411 CHADLQ6NUI6 762 aa31.39■■■□□ 2.62
TSPAN4-207ENST00000397411 RPAP2Q8IXW5 612 aaPredicted RBP31.39■■■□□ 2.62
TSPAN4-207ENST00000397411 PSME4Q14997 1843 aa31.38■■■□□ 2.61
TSPAN4-207ENST00000397411 POTEIP0CG38 1075 aa31.38■■■□□ 2.61
TSPAN4-207ENST00000397411 POTEJP0CG39 1038 aa31.38■■■□□ 2.61
TSPAN4-207ENST00000397411 DACT2Q5SW24 774 aa31.38■■■□□ 2.61
TSPAN4-207ENST00000397411 RBM26Q5T8P6 1007 aaKnown RBP31.38■■■□□ 2.61
TSPAN4-207ENST00000397411 FBXO33Q7Z6M2 555 aa31.38■■■□□ 2.61
TSPAN4-207ENST00000397411 BCAMP50895 628 aa31.37■■■□□ 2.61
TSPAN4-207ENST00000397411 MXD3Q9BW11 206 aa31.37■■■□□ 2.61
TSPAN4-207ENST00000397411 MYO3BQ8WXR4 1341 aa31.37■■■□□ 2.61
TSPAN4-207ENST00000397411 SHTN1A0MZ66 631 aa31.36■■■□□ 2.61
TSPAN4-207ENST00000397411 HMMRO75330 724 aa31.36■■■□□ 2.61
TSPAN4-207ENST00000397411 SASH1O94885 1247 aa31.36■■■□□ 2.61
TSPAN4-207ENST00000397411 USP17L8P0C7I0 530 aa31.36■■■□□ 2.61
TSPAN4-207ENST00000397411 TDRD7Q8NHU6 1098 aaKnown RBP31.36■■■□□ 2.61
TSPAN4-207ENST00000397411 OGFOD1Q8N543 542 aa31.35■■■□□ 2.61
TSPAN4-207ENST00000397411 NEUROD6Q96NK8 337 aa31.35■■■□□ 2.61
TSPAN4-207ENST00000397411 IQSEC3Q9UPP2 1182 aaPredicted RBP31.35■■■□□ 2.61
TSPAN4-207ENST00000397411 JAG2Q9Y219 1238 aa31.35■■■□□ 2.61
TSPAN4-207ENST00000397411 TBC1D10BQ4KMP7 808 aaPredicted RBP31.34■■■□□ 2.61
TSPAN4-207ENST00000397411 SAMD7Q7Z3H4 446 aa31.34■■■□□ 2.61
TSPAN4-207ENST00000397411 GNL3LQ9NVN8 582 aaKnown RBP31.34■■■□□ 2.61
TSPAN4-207ENST00000397411 TIMM10P62072 90 aa31.33■■■□□ 2.61
TSPAN4-207ENST00000397411 CHAF1AQ13111 956 aaPredicted RBP31.32■■■□□ 2.6
TSPAN4-207ENST00000397411 GMLQ99445 158 aa31.32■■■□□ 2.6
TSPAN4-207ENST00000397411 HDAC9Q9UKV0 1011 aa31.32■■■□□ 2.6
TSPAN4-207ENST00000397411 GORABQ5T7V8 394 aa31.31■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms