RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 C7orf43Q8WVR3 580 aa18.16■□□□□ 0.5
CAPN3-207ENST00000397200 LPIN2Q92539 896 aa18.16■□□□□ 0.5
CAPN3-207ENST00000397200 NEUROD6Q96NK8 337 aa18.16■□□□□ 0.5
CAPN3-207ENST00000397200 CCDC8Q9H0W5 538 aaPredicted RBP18.16■□□□□ 0.5
CAPN3-207ENST00000397200 LTBP1Q14766 1721 aa18.15■□□□□ 0.5
CAPN3-207ENST00000397200 SLC5A1P13866 664 aa18.15■□□□□ 0.5
CAPN3-207ENST00000397200 TIMM10P62072 90 aa18.15■□□□□ 0.5
CAPN3-207ENST00000397200 UBE4AQ14139 1066 aa18.15■□□□□ 0.5
CAPN3-207ENST00000397200 MPNDQ8N594 471 aa18.15■□□□□ 0.5
CAPN3-207ENST00000397200 TBC1D2Q9BYX2 928 aa18.15■□□□□ 0.5
CAPN3-207ENST00000397200 PODXL2Q9NZ53 605 aa18.15■□□□□ 0.5
CAPN3-207ENST00000397200 GGA1Q9UJY5 639 aa18.15■□□□□ 0.5
CAPN3-207ENST00000397200 LEMD3Q9Y2U8 911 aa18.15■□□□□ 0.5
CAPN3-207ENST00000397200 ZNF804BA4D1E1 1349 aa18.14■□□□□ 0.49
CAPN3-207ENST00000397200 SNAP23O00161 211 aa18.14■□□□□ 0.49
CAPN3-207ENST00000397200 IFIT1P09914 478 aaKnown RBP18.14■□□□□ 0.49
CAPN3-207ENST00000397200 FGFR2P21802 821 aa18.14■□□□□ 0.49
CAPN3-207ENST00000397200 ATP2B4P23634 1241 aa18.14■□□□□ 0.49
CAPN3-207ENST00000397200 SOGA3Q5TF21 947 aa18.14■□□□□ 0.49
CAPN3-207ENST00000397200 DPP8Q6V1X1 898 aaPredicted RBP18.14■□□□□ 0.49
CAPN3-207ENST00000397200 BCS1LQ9Y276 419 aa18.14■□□□□ 0.49
CAPN3-207ENST00000397200 ARFGEF1Q9Y6D6 1849 aa18.14■□□□□ 0.49
CAPN3-207ENST00000397200 AOX1Q06278 1338 aa18.14■□□□□ 0.49
CAPN3-207ENST00000397200 UFL1O94874 794 aa18.13■□□□□ 0.49
CAPN3-207ENST00000397200 PDE1AP54750 535 aa18.13■□□□□ 0.49
CAPN3-207ENST00000397200 GRIPAP1Q4V328 841 aa18.13■□□□□ 0.49
CAPN3-207ENST00000397200 CCDC93Q567U6 631 aa18.13■□□□□ 0.49
CAPN3-207ENST00000397200 SDSP20132 328 aa18.12■□□□□ 0.49
CAPN3-207ENST00000397200 XAGE2Q96GT9 111 aa18.12■□□□□ 0.49
CAPN3-207ENST00000397200 DBNDD2Q9BQY9 259 aa18.12■□□□□ 0.49
CAPN3-207ENST00000397200 TLR7Q9NYK1 1049 aaKnown RBP18.12■□□□□ 0.49
CAPN3-207ENST00000397200 STAP2Q9UGK3 403 aa18.12■□□□□ 0.49
CAPN3-207ENST00000397200 C6orf229H3BNL8 230 aa18.12■□□□□ 0.49
CAPN3-207ENST00000397200 MX1P20591 662 aa18.12■□□□□ 0.49
CAPN3-207ENST00000397200 GORABQ5T7V8 394 aa18.12■□□□□ 0.49
CAPN3-207ENST00000397200 RTKN2Q8IZC4 609 aa18.12■□□□□ 0.49
CAPN3-207ENST00000397200 TBC1D16Q8TBP0 767 aa18.12■□□□□ 0.49
CAPN3-207ENST00000397200 GPATCH3Q96I76 525 aa18.12■□□□□ 0.49
CAPN3-207ENST00000397200 DBNLQ9UJU6 430 aaKnown RBP18.12■□□□□ 0.49
CAPN3-207ENST00000397200 DUOX1Q9NRD9 1551 aa18.11■□□□□ 0.49
CAPN3-207ENST00000397200 WTIPA6NIX2 430 aaPredicted RBP18.11■□□□□ 0.49
CAPN3-207ENST00000397200 ADORA1P30542 326 aa18.11■□□□□ 0.49
CAPN3-207ENST00000397200 NBR1Q14596 966 aa18.11■□□□□ 0.49
CAPN3-207ENST00000397200 POLLQ9UGP5 575 aa18.11■□□□□ 0.49
CAPN3-207ENST00000397200 SNX21Q969T3 373 aa18.1■□□□□ 0.49
CAPN3-207ENST00000397200 KIF2CQ99661 725 aa18.1■□□□□ 0.49
CAPN3-207ENST00000397200 SNED1Q8TER0 1413 aa18.1■□□□□ 0.49
CAPN3-207ENST00000397200 ANTXR1Q9H6X2 564 aa18.09■□□□□ 0.49
CAPN3-207ENST00000397200 FER1L6Q2WGJ9 1857 aa18.09■□□□□ 0.49
CAPN3-207ENST00000397200 CAVIN4Q5BKX8 364 aa18.09■□□□□ 0.49
CAPN3-207ENST00000397200 CCDC158Q5M9N0 1113 aa18.09■□□□□ 0.49
CAPN3-207ENST00000397200 SUPT20HQ8NEM7 779 aa18.09■□□□□ 0.49
CAPN3-207ENST00000397200 EYA3Q99504 573 aa18.09■□□□□ 0.49
CAPN3-207ENST00000397200 RTFDC1Q9BY42 306 aaPredicted RBP18.09■□□□□ 0.49
CAPN3-207ENST00000397200 ECHDC1Q9NTX5 307 aa18.09■□□□□ 0.49
CAPN3-207ENST00000397200 TTC41PQ6P2S7 1318 aa18.08■□□□□ 0.49
CAPN3-207ENST00000397200 MED23Q9ULK4 1368 aa18.08■□□□□ 0.48
CAPN3-207ENST00000397200 KLRK1P26718 216 aa18.08■□□□□ 0.48
CAPN3-207ENST00000397200 C15orf52Q6ZUT6 534 aaKnown RBP18.08■□□□□ 0.48
CAPN3-207ENST00000397200 VPS37DQ86XT2 251 aa18.08■□□□□ 0.48
CAPN3-207ENST00000397200 GPR101Q96P66 508 aaPredicted RBP18.08■□□□□ 0.48
CAPN3-207ENST00000397200 ERC2O15083 957 aa18.07■□□□□ 0.48
CAPN3-207ENST00000397200 GYG1P46976 350 aa18.07■□□□□ 0.48
CAPN3-207ENST00000397200 TTC39AQ5SRH9 613 aa18.07■□□□□ 0.48
CAPN3-207ENST00000397200 TSHZ3Q63HK5 1081 aa18.07■□□□□ 0.48
CAPN3-207ENST00000397200 PSMD1Q99460 953 aa18.07■□□□□ 0.48
CAPN3-207ENST00000397200 ZC3H12CQ9C0D7 883 aaKnown RBP18.07■□□□□ 0.48
CAPN3-207ENST00000397200 IRS2Q9Y4H2 1338 aa18.07■□□□□ 0.48
CAPN3-207ENST00000397200 BCAMP50895 628 aa18.06■□□□□ 0.48
CAPN3-207ENST00000397200 FKBP4Q02790 459 aaKnown RBP eCLIP18.06■□□□□ 0.48
CAPN3-207ENST00000397200 WASHC4Q2M389 1173 aa18.06■□□□□ 0.48
CAPN3-207ENST00000397200 CCDC102BQ68D86 513 aa18.06■□□□□ 0.48
CAPN3-207ENST00000397200 ZNF804AQ7Z570 1209 aa18.06■□□□□ 0.48
CAPN3-207ENST00000397200 TXNRD3Q86VQ6 643 aa18.06■□□□□ 0.48
CAPN3-207ENST00000397200 FAM84BQ96KN1 310 aaPredicted RBP18.06■□□□□ 0.48
CAPN3-207ENST00000397200 HIBADHP31937 336 aaKnown RBP18.05■□□□□ 0.48
CAPN3-207ENST00000397200 PHKA1P46020 1223 aa18.05■□□□□ 0.48
CAPN3-207ENST00000397200 GNL3LQ9NVN8 582 aaKnown RBP18.05■□□□□ 0.48
CAPN3-207ENST00000397200 MYH13Q9UKX3 1938 aa18.05■□□□□ 0.48
CAPN3-207ENST00000397200 RIMBP2O15034 1052 aa18.05■□□□□ 0.48
CAPN3-207ENST00000397200 GLRX3O76003 335 aaKnown RBP18.05■□□□□ 0.48
CAPN3-207ENST00000397200 UQCRFS1P1P0C7P4 283 aa18.05■□□□□ 0.48
CAPN3-207ENST00000397200 ATP5JP18859 108 aa18.05■□□□□ 0.48
CAPN3-207ENST00000397200 CASC1Q6TDU7 716 aa18.05■□□□□ 0.48
CAPN3-207ENST00000397200 FBXO33Q7Z6M2 555 aa18.05■□□□□ 0.48
CAPN3-207ENST00000397200 TAOK3Q9H2K8 898 aa18.05■□□□□ 0.48
CAPN3-207ENST00000397200 NFKBIBQ15653 356 aa18.04■□□□□ 0.48
CAPN3-207ENST00000397200 PI4K2BQ8TCG2 481 aa18.04■□□□□ 0.48
CAPN3-207ENST00000397200 G3V3G9 751 aa18.03■□□□□ 0.48
CAPN3-207ENST00000397200 ARID4AP29374 1257 aaPredicted RBP18.03■□□□□ 0.48
CAPN3-207ENST00000397200 DCAF8Q5TAQ9 597 aa18.03■□□□□ 0.48
CAPN3-207ENST00000397200 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.03■□□□□ 0.48
CAPN3-207ENST00000397200 ZNF512BQ96KM6 892 aaPredicted RBP18.03■□□□□ 0.48
CAPN3-207ENST00000397200 USP26Q9BXU7 913 aa18.03■□□□□ 0.48
CAPN3-207ENST00000397200 PPIP5K2O43314 1243 aa18.02■□□□□ 0.48
CAPN3-207ENST00000397200 KIAA2012Q0VF49 1180 aa18.02■□□□□ 0.48
CAPN3-207ENST00000397200 HSCBQ8IWL3 235 aa18.02■□□□□ 0.48
CAPN3-207ENST00000397200 BOLA2Q9H3K6 86 aa18.02■□□□□ 0.48
CAPN3-207ENST00000397200 ZNF277Q9NRM2 450 aaPredicted RBP18.02■□□□□ 0.48
CAPN3-207ENST00000397200 SRCAPQ6ZRS2 3230 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms