RNA–Protein interactions for RNA: ENST00000396205.6

LMO3-205, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 3,534 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-205ENST00000396205 FGFR2P21802 821 aa8.3□□□□□ -1.08
LMO3-205ENST00000396205 TLL2Q9Y6L7 1015 aa8.3□□□□□ -1.08
LMO3-205ENST00000396205 CCDC57Q2TAC2 916 aa8.3□□□□□ -1.08
LMO3-205ENST00000396205 COPRSQ9NQ92 184 aa8.3□□□□□ -1.08
LMO3-205ENST00000396205 C9orf78Q9NZ63 289 aaPredicted RBP8.3□□□□□ -1.08
LMO3-205ENST00000396205 UTRNP46939 3433 aa8.3□□□□□ -1.08
LMO3-205ENST00000396205 SEMA3EO15041 775 aa8.29□□□□□ -1.08
LMO3-205ENST00000396205 GNAI3P08754 354 aa8.29□□□□□ -1.08
LMO3-205ENST00000396205 EPHA10Q5JZY3 1008 aa8.29□□□□□ -1.08
LMO3-205ENST00000396205 ZNF804AQ7Z570 1209 aa8.29□□□□□ -1.08
LMO3-205ENST00000396205 MPHOSPH8Q99549 860 aa8.29□□□□□ -1.08
LMO3-205ENST00000396205 SMC4Q9NTJ3 1288 aa8.29□□□□□ -1.08
LMO3-205ENST00000396205 ANKIB1Q9P2G1 1089 aa8.29□□□□□ -1.08
LMO3-205ENST00000396205 F6X3S4 739 aa8.29□□□□□ -1.08
LMO3-205ENST00000396205 TDRD7Q8NHU6 1098 aaKnown RBP8.29□□□□□ -1.08
LMO3-205ENST00000396205 CDCA7LQ96GN5 454 aa8.29□□□□□ -1.08
LMO3-205ENST00000396205 ZNF219Q9P2Y4 722 aaPredicted RBP8.29□□□□□ -1.08
LMO3-205ENST00000396205 H7C1D1 291 aa8.29□□□□□ -1.08
LMO3-205ENST00000396205 NBPF7P0C2Y1 421 aaPredicted RBP8.29□□□□□ -1.08
LMO3-205ENST00000396205 LMBR1LQ6UX01 489 aa8.29□□□□□ -1.08
LMO3-205ENST00000396205 ATF7IPQ6VMQ6 1270 aa8.29□□□□□ -1.08
LMO3-205ENST00000396205 ZNF526Q8TF50 670 aaPredicted RBP8.29□□□□□ -1.08
LMO3-205ENST00000396205 CDC37L1Q7L3B6 337 aa8.28□□□□□ -1.08
LMO3-205ENST00000396205 FBXO33Q7Z6M2 555 aa8.28□□□□□ -1.08
LMO3-205ENST00000396205 CNTROBQ8N137 903 aa8.28□□□□□ -1.08
LMO3-205ENST00000396205 BICC1Q9H694 974 aaKnown RBP8.28□□□□□ -1.08
LMO3-205ENST00000396205 CNOT7Q9UIV1 285 aaKnown RBP8.28□□□□□ -1.08
LMO3-205ENST00000396205 MS4A1P11836 297 aa8.28□□□□□ -1.08
LMO3-205ENST00000396205 EPS15P42566 896 aa8.28□□□□□ -1.08
LMO3-205ENST00000396205 DDX60LQ5H9U9 1706 aaKnown RBP8.28□□□□□ -1.08
LMO3-205ENST00000396205 C6orf229H3BNL8 230 aa8.28□□□□□ -1.08
LMO3-205ENST00000396205 MAP3K11Q16584 847 aa8.28□□□□□ -1.08
LMO3-205ENST00000396205 SLC51AQ86UW1 340 aa8.28□□□□□ -1.08
LMO3-205ENST00000396205 MICALL2Q8IY33 904 aa8.28□□□□□ -1.08
LMO3-205ENST00000396205 MIER1Q8N108 512 aa8.28□□□□□ -1.08
LMO3-205ENST00000396205 GPR108Q9NPR9 543 aa8.28□□□□□ -1.08
LMO3-205ENST00000396205 NOB1Q9ULX3 412 aaKnown RBP8.28□□□□□ -1.08
LMO3-205ENST00000396205 MAP4K4O95819 1239 aaPredicted RBP8.27□□□□□ -1.09
LMO3-205ENST00000396205 HIRAP54198 1017 aaPredicted RBP8.27□□□□□ -1.09
LMO3-205ENST00000396205 TBC1D22AQ8WUA7 517 aa8.27□□□□□ -1.09
LMO3-205ENST00000396205 CD209Q9NNX6 404 aa8.27□□□□□ -1.09
LMO3-205ENST00000396205 AKAP11Q9UKA4 1901 aa8.27□□□□□ -1.09
LMO3-205ENST00000396205 SASH1O94885 1247 aa8.27□□□□□ -1.09
LMO3-205ENST00000396205 PDE8BO95263 885 aa8.27□□□□□ -1.09
LMO3-205ENST00000396205 SERPINA10Q9UK55 444 aa8.27□□□□□ -1.09
LMO3-205ENST00000396205 POLR2AP24928 1970 aaKnown RBP8.27□□□□□ -1.09
LMO3-205ENST00000396205 MAP2K2P36507 400 aa8.26□□□□□ -1.09
LMO3-205ENST00000396205 PTPN12Q05209 780 aaKnown RBP8.26□□□□□ -1.09
LMO3-205ENST00000396205 PUM3Q15397 648 aaKnown RBP8.26□□□□□ -1.09
LMO3-205ENST00000396205 FKBP1CQ5VVH2 108 aa8.26□□□□□ -1.09
LMO3-205ENST00000396205 ZNF512BQ96KM6 892 aaPredicted RBP8.26□□□□□ -1.09
LMO3-205ENST00000396205 CFHR5Q9BXR6 569 aa8.26□□□□□ -1.09
LMO3-205ENST00000396205 CDK5RAP2Q96SN8 1893 aa8.26□□□□□ -1.09
LMO3-205ENST00000396205 MAST3O60307 1309 aa8.26□□□□□ -1.09
LMO3-205ENST00000396205 EYA2O00167 538 aa8.26□□□□□ -1.09
LMO3-205ENST00000396205 USP17L8P0C7I0 530 aa8.26□□□□□ -1.09
LMO3-205ENST00000396205 TRIM27P14373 513 aa8.26□□□□□ -1.09
LMO3-205ENST00000396205 POLA2Q14181 598 aa8.26□□□□□ -1.09
LMO3-205ENST00000396205 KIF4BQ2VIQ3 1234 aa8.26□□□□□ -1.09
LMO3-205ENST00000396205 NOM1Q5C9Z4 860 aaKnown RBP8.26□□□□□ -1.09
LMO3-205ENST00000396205 APOBEC3FQ8IUX4 373 aaKnown RBP8.26□□□□□ -1.09
LMO3-205ENST00000396205 MYOZ2Q9NPC6 264 aa8.26□□□□□ -1.09
LMO3-205ENST00000396205 UBTFL1P0CB47 393 aaPredicted RBP8.26□□□□□ -1.09
LMO3-205ENST00000396205 IL15P40933 162 aaPredicted RBP8.26□□□□□ -1.09
LMO3-205ENST00000396205 ZKSCAN2Q63HK3 967 aa8.26□□□□□ -1.09
LMO3-205ENST00000396205 LDHAL6AQ6ZMR3 332 aa8.26□□□□□ -1.09
LMO3-205ENST00000396205 ATG9AQ7Z3C6 839 aa8.26□□□□□ -1.09
LMO3-205ENST00000396205 DBNDD1Q9H9R9 158 aa8.26□□□□□ -1.09
LMO3-205ENST00000396205 SAGE1Q9NXZ1 904 aa8.26□□□□□ -1.09
LMO3-205ENST00000396205 DAXXQ9UER7 740 aaPredicted RBP8.26□□□□□ -1.09
LMO3-205ENST00000396205 RFX7Q2KHR2 1363 aa8.26□□□□□ -1.09
LMO3-205ENST00000396205 GOLGB1Q14789 3259 aaKnown RBP8.26□□□□□ -1.09
LMO3-205ENST00000396205 RBBP6Q7Z6E9 1792 aaKnown RBP8.25□□□□□ -1.09
LMO3-205ENST00000396205 CA12O43570 354 aa8.25□□□□□ -1.09
LMO3-205ENST00000396205 POTEIP0CG38 1075 aa8.25□□□□□ -1.09
LMO3-205ENST00000396205 POTEJP0CG39 1038 aa8.25□□□□□ -1.09
LMO3-205ENST00000396205 ECE1P42892 770 aa8.25□□□□□ -1.09
LMO3-205ENST00000396205 TRPM4Q8TD43 1214 aa8.25□□□□□ -1.09
LMO3-205ENST00000396205 LPIN2Q92539 896 aa8.25□□□□□ -1.09
LMO3-205ENST00000396205 BCL2L13Q9BXK5 485 aa8.25□□□□□ -1.09
LMO3-205ENST00000396205 CHMP4BQ9H444 224 aaKnown RBP8.25□□□□□ -1.09
LMO3-205ENST00000396205 HDAC9Q9UKV0 1011 aa8.25□□□□□ -1.09
LMO3-205ENST00000396205 GJA3Q9Y6H8 435 aa8.25□□□□□ -1.09
LMO3-205ENST00000396205 TCERG1O14776 1098 aaKnown RBP8.25□□□□□ -1.09
LMO3-205ENST00000396205 NOP58Q9Y2X3 529 aaKnown RBP8.25□□□□□ -1.09
LMO3-205ENST00000396205 SSC5DA1L4H1 1573 aa8.25□□□□□ -1.09
LMO3-205ENST00000396205 RAD17O75943 681 aa8.24□□□□□ -1.09
LMO3-205ENST00000396205 CST9Q5W186 159 aa8.24□□□□□ -1.09
LMO3-205ENST00000396205 FAM84BQ96KN1 310 aaPredicted RBP8.24□□□□□ -1.09
LMO3-205ENST00000396205 PRDM10Q9NQV6 1147 aa8.24□□□□□ -1.09
LMO3-205ENST00000396205 NPM3O75607 178 aaKnown RBP8.24□□□□□ -1.09
LMO3-205ENST00000396205 SAPCD2Q86UD0 394 aa8.24□□□□□ -1.09
LMO3-205ENST00000396205 TAOK2Q9UL54 1235 aa8.24□□□□□ -1.09
LMO3-205ENST00000396205 RTL5Q5HYW3 569 aaPredicted RBP8.24□□□□□ -1.09
LMO3-205ENST00000396205 SSH3Q8TE77 659 aa8.24□□□□□ -1.09
LMO3-205ENST00000396205 TXNRD3Q86VQ6 643 aa8.23□□□□□ -1.09
LMO3-205ENST00000396205 CNNM1Q9NRU3 951 aa8.23□□□□□ -1.09
LMO3-205ENST00000396205 DOCK1Q14185 1865 aa8.23□□□□□ -1.09
LMO3-205ENST00000396205 MYH2Q9UKX2 1941 aa8.23□□□□□ -1.09
LMO3-205ENST00000396205 HIBADHP31937 336 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms