RNA–Protein interactions for RNA: ENST00000392590.3

CDCA4-202, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-202ENST00000392590 PA2G4Q9UQ80 394 aaKnown RBP25.82■■□□□ 1.72
CDCA4-202ENST00000392590 CIAO1O76071 339 aa25.81■■□□□ 1.72
CDCA4-202ENST00000392590 GMPSP49915 693 aaPredicted RBP25.81■■□□□ 1.72
CDCA4-202ENST00000392590 TAF1DQ9H5J8 278 aaPredicted RBP25.81■■□□□ 1.72
CDCA4-202ENST00000392590 DDX19BQ9UMR2 479 aa25.81■■□□□ 1.72
CDCA4-202ENST00000392590 SCNN1DP51172 638 aa25.8■■□□□ 1.72
CDCA4-202ENST00000392590 C1QTNF8P60827 252 aa25.8■■□□□ 1.72
CDCA4-202ENST00000392590 C20orf194Q5TEA3 1177 aa25.8■■□□□ 1.72
CDCA4-202ENST00000392590 ATG9AQ7Z3C6 839 aa25.8■■□□□ 1.72
CDCA4-202ENST00000392590 IRS2Q9Y4H2 1338 aa25.79■■□□□ 1.72
CDCA4-202ENST00000392590 PNMA6EA0A0J9YXQ4 647 aa25.79■■□□□ 1.72
CDCA4-202ENST00000392590 EPHX2P34913 555 aa25.79■■□□□ 1.72
CDCA4-202ENST00000392590 VGLL2Q8N8G2 317 aa25.79■■□□□ 1.72
CDCA4-202ENST00000392590 IL15P40933 162 aaPredicted RBP25.78■■□□□ 1.72
CDCA4-202ENST00000392590 ATP8B2P98198 1209 aa25.78■■□□□ 1.72
CDCA4-202ENST00000392590 RBM46Q8TBY0 533 aaKnown RBP25.78■■□□□ 1.72
CDCA4-202ENST00000392590 ZBTB12Q9Y330 459 aaPredicted RBP25.78■■□□□ 1.72
CDCA4-202ENST00000392590 USP17L3A6NCW0 530 aa25.78■■□□□ 1.72
CDCA4-202ENST00000392590 USP17L4A6NCW7 530 aa25.78■■□□□ 1.72
CDCA4-202ENST00000392590 VIL1P09327 827 aaKnown RBP25.78■■□□□ 1.72
CDCA4-202ENST00000392590 EPS15P42566 896 aa25.78■■□□□ 1.72
CDCA4-202ENST00000392590 USP17L1Q7RTZ2 530 aa25.78■■□□□ 1.72
CDCA4-202ENST00000392590 ZNF804AQ7Z570 1209 aa25.78■■□□□ 1.72
CDCA4-202ENST00000392590 CHMP4BQ9H444 224 aaKnown RBP25.78■■□□□ 1.72
CDCA4-202ENST00000392590 CD209Q9NNX6 404 aa25.78■■□□□ 1.72
CDCA4-202ENST00000392590 GPRC5DQ9NZD1 345 aa25.78■■□□□ 1.72
CDCA4-202ENST00000392590 CEP126Q9P2H0 1117 aa25.77■■□□□ 1.72
CDCA4-202ENST00000392590 PNMA8AQ86V59 439 aaPredicted RBP25.76■■□□□ 1.71
CDCA4-202ENST00000392590 RPS12P25398 132 aaKnown RBP25.75■■□□□ 1.71
CDCA4-202ENST00000392590 PUM3Q15397 648 aaKnown RBP25.75■■□□□ 1.71
CDCA4-202ENST00000392590 EAPPQ56P03 285 aaPredicted RBP25.75■■□□□ 1.71
CDCA4-202ENST00000392590 DPF2Q92785 391 aa25.75■■□□□ 1.71
CDCA4-202ENST00000392590 CNOT7Q9UIV1 285 aaKnown RBP25.75■■□□□ 1.71
CDCA4-202ENST00000392590 POLA2Q14181 598 aa25.74■■□□□ 1.71
CDCA4-202ENST00000392590 RSBN1LQ6PCB5 846 aaPredicted RBP25.74■■□□□ 1.71
CDCA4-202ENST00000392590 FBXW7Q969H0 707 aa25.74■■□□□ 1.71
CDCA4-202ENST00000392590 ZBTB40Q9NUA8 1239 aa25.74■■□□□ 1.71
CDCA4-202ENST00000392590 HIBADHP31937 336 aaKnown RBP25.73■■□□□ 1.71
CDCA4-202ENST00000392590 GYG1P46976 350 aa25.73■■□□□ 1.71
CDCA4-202ENST00000392590 RRP1P56182 461 aaKnown RBP25.73■■□□□ 1.71
CDCA4-202ENST00000392590 STRIP1Q5VSL9 837 aa25.73■■□□□ 1.71
CDCA4-202ENST00000392590 TTLL5Q6EMB2 1281 aa25.73■■□□□ 1.71
CDCA4-202ENST00000392590 SMC1BQ8NDV3 1235 aa25.73■■□□□ 1.71
CDCA4-202ENST00000392590 SSH3Q8TE77 659 aa25.73■■□□□ 1.71
CDCA4-202ENST00000392590 FAM84BQ96KN1 310 aaPredicted RBP25.73■■□□□ 1.71
CDCA4-202ENST00000392590 H7C1D1 291 aa25.73■■□□□ 1.71
CDCA4-202ENST00000392590 IFIT1P09914 478 aaKnown RBP25.73■■□□□ 1.71
CDCA4-202ENST00000392590 IL1R1P14778 569 aa25.73■■□□□ 1.71
CDCA4-202ENST00000392590 FGFR2P21802 821 aa25.73■■□□□ 1.71
CDCA4-202ENST00000392590 CAVIN4Q5BKX8 364 aa25.73■■□□□ 1.71
CDCA4-202ENST00000392590 CEP85Q6P2H3 762 aa25.73■■□□□ 1.71
CDCA4-202ENST00000392590 LPIN2Q92539 896 aa25.73■■□□□ 1.71
CDCA4-202ENST00000392590 ADARB2Q9NS39 739 aaKnown RBP25.73■■□□□ 1.71
CDCA4-202ENST00000392590 POTEIP0CG38 1075 aa25.72■■□□□ 1.71
CDCA4-202ENST00000392590 POTEJP0CG39 1038 aa25.72■■□□□ 1.71
CDCA4-202ENST00000392590 GTF2IP78347 998 aa25.72■■□□□ 1.71
CDCA4-202ENST00000392590 FSTL1Q12841 308 aa25.72■■□□□ 1.71
CDCA4-202ENST00000392590 G3BP1Q13283 466 aaKnown RBP eCLIP25.72■■□□□ 1.71
CDCA4-202ENST00000392590 VPS37DQ86XT2 251 aa25.72■■□□□ 1.71
CDCA4-202ENST00000392590 MICALL2Q8IY33 904 aa25.72■■□□□ 1.71
CDCA4-202ENST00000392590 AGBL3Q8NEM8 1001 aa25.72■■□□□ 1.71
CDCA4-202ENST00000392590 CLEC11AQ9Y240 323 aa25.72■■□□□ 1.71
CDCA4-202ENST00000392590 SCN4AP35499 1836 aa25.71■■□□□ 1.71
CDCA4-202ENST00000392590 SLC5A1P13866 664 aa25.71■■□□□ 1.71
CDCA4-202ENST00000392590 DACT2Q5SW24 774 aa25.71■■□□□ 1.71
CDCA4-202ENST00000392590 USP50Q70EL3 339 aaPredicted RBP25.71■■□□□ 1.71
CDCA4-202ENST00000392590 LDHDQ86WU2 507 aa25.71■■□□□ 1.71
CDCA4-202ENST00000392590 ATP2B3Q16720 1220 aa25.7■■□□□ 1.7
CDCA4-202ENST00000392590 FBXO33Q7Z6M2 555 aa25.7■■□□□ 1.7
CDCA4-202ENST00000392590 SHTN1A0MZ66 631 aa25.69■■□□□ 1.7
CDCA4-202ENST00000392590 CHADLQ6NUI6 762 aa25.69■■□□□ 1.7
CDCA4-202ENST00000392590 A0A1B0GUL6 1792 aa25.69■■□□□ 1.7
CDCA4-202ENST00000392590 SURF6O75683 361 aaKnown RBP25.68■■□□□ 1.7
CDCA4-202ENST00000392590 SASH1O94885 1247 aa25.68■■□□□ 1.7
CDCA4-202ENST00000392590 TFCP2Q12800 502 aa25.68■■□□□ 1.7
CDCA4-202ENST00000392590 TDRD7Q8NHU6 1098 aaKnown RBP25.68■■□□□ 1.7
CDCA4-202ENST00000392590 GMLQ99445 158 aa25.68■■□□□ 1.7
CDCA4-202ENST00000392590 MXD3Q9BW11 206 aa25.68■■□□□ 1.7
CDCA4-202ENST00000392590 RPAP2Q8IXW5 612 aaPredicted RBP25.68■■□□□ 1.7
CDCA4-202ENST00000392590 MYO3BQ8WXR4 1341 aa25.67■■□□□ 1.7
CDCA4-202ENST00000392590 SCN9AQ15858 1988 aa25.67■■□□□ 1.7
CDCA4-202ENST00000392590 BCAMP50895 628 aa25.67■■□□□ 1.7
CDCA4-202ENST00000392590 AKAP2Q9Y2D5 859 aa25.67■■□□□ 1.7
CDCA4-202ENST00000392590 USP17L8P0C7I0 530 aa25.66■■□□□ 1.7
CDCA4-202ENST00000392590 OS9Q13438 667 aaPredicted RBP25.66■■□□□ 1.7
CDCA4-202ENST00000392590 SAMD7Q7Z3H4 446 aa25.66■■□□□ 1.7
CDCA4-202ENST00000392590 ZNF609O15014 1411 aa25.65■■□□□ 1.7
CDCA4-202ENST00000392590 FRAT2O75474 233 aaPredicted RBP25.65■■□□□ 1.7
CDCA4-202ENST00000392590 RBM26Q5T8P6 1007 aaKnown RBP25.65■■□□□ 1.7
CDCA4-202ENST00000392590 NOP58Q9Y2X3 529 aaKnown RBP25.65■■□□□ 1.7
CDCA4-202ENST00000392590 HIRAP54198 1017 aaPredicted RBP25.64■■□□□ 1.7
CDCA4-202ENST00000392590 TIMM10P62072 90 aa25.64■■□□□ 1.7
CDCA4-202ENST00000392590 TBC1D10BQ4KMP7 808 aaPredicted RBP25.64■■□□□ 1.7
CDCA4-202ENST00000392590 TRPM4Q8TD43 1214 aa25.64■■□□□ 1.7
CDCA4-202ENST00000392590 IQSEC3Q9UPP2 1182 aaPredicted RBP25.64■■□□□ 1.7
CDCA4-202ENST00000392590 JAG2Q9Y219 1238 aa25.64■■□□□ 1.7
CDCA4-202ENST00000392590 ZNF280AP59817 542 aaPredicted RBP25.63■■□□□ 1.69
CDCA4-202ENST00000392590 OGFOD1Q8N543 542 aa25.63■■□□□ 1.69
CDCA4-202ENST00000392590 FAM205AQ6ZU69 1335 aa25.63■■□□□ 1.69
CDCA4-202ENST00000392590 HMMRO75330 724 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms