RNA–Protein interactions for RNA: ENST00000390387.3

TRBV3-1-201, Transcript of T cell receptor beta variable 3-1, humanhuman

APPRIS P1 BASIC

Gene TRBV3-1, Length 391 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV3-1-201ENST00000390387 IGKV5-2P06315 115 aa12.04□□□□□ -0.48
TRBV3-1-201ENST00000390387 CTSWP56202 376 aa12.04□□□□□ -0.48
TRBV3-1-201ENST00000390387 FKBP1BP68106 108 aa12.04□□□□□ -0.48
TRBV3-1-201ENST00000390387 CALD1Q05682 793 aaKnown RBP12.04□□□□□ -0.48
TRBV3-1-201ENST00000390387 USP17L1Q7RTZ2 530 aa12.04□□□□□ -0.48
TRBV3-1-201ENST00000390387 SCAF8Q9UPN6 1271 aaKnown RBP12.04□□□□□ -0.48
TRBV3-1-201ENST00000390387 MAP3K2Q9Y2U5 619 aa12.04□□□□□ -0.48
TRBV3-1-201ENST00000390387 ZNF646O15015 1829 aaPredicted RBP12.03□□□□□ -0.48
TRBV3-1-201ENST00000390387 DACT2Q5SW24 774 aa12.03□□□□□ -0.48
TRBV3-1-201ENST00000390387 CCDC30Q5VVM6 783 aa12.03□□□□□ -0.48
TRBV3-1-201ENST00000390387 MOB2Q70IA6 237 aa12.03□□□□□ -0.48
TRBV3-1-201ENST00000390387 REM2Q8IYK8 340 aaPredicted RBP12.03□□□□□ -0.48
TRBV3-1-201ENST00000390387 TSPYL6Q8N831 410 aa12.03□□□□□ -0.48
TRBV3-1-201ENST00000390387 TTLL11Q8NHH1 800 aa12.03□□□□□ -0.48
TRBV3-1-201ENST00000390387 CDC5LQ99459 802 aaKnown RBP12.03□□□□□ -0.48
TRBV3-1-201ENST00000390387 GREM2Q9H772 168 aa12.03□□□□□ -0.48
TRBV3-1-201ENST00000390387 MINPP1Q9UNW1 487 aa12.03□□□□□ -0.48
TRBV3-1-201ENST00000390387 AKAP11Q9UKA4 1901 aa12.03□□□□□ -0.48
TRBV3-1-201ENST00000390387 PDE4DIPQ5VU43 2346 aa12.02□□□□□ -0.49
TRBV3-1-201ENST00000390387 PI4KAP2A4QPH2 592 aa12.02□□□□□ -0.49
TRBV3-1-201ENST00000390387 SOX10P56693 466 aa12.02□□□□□ -0.49
TRBV3-1-201ENST00000390387 NBPF9Q3BBW0 867 aa12.02□□□□□ -0.49
TRBV3-1-201ENST00000390387 KSR2Q6VAB6 950 aa12.02□□□□□ -0.49
TRBV3-1-201ENST00000390387 CTU1Q7Z7A3 348 aaKnown RBP12.02□□□□□ -0.49
TRBV3-1-201ENST00000390387 PI4KAP1Q8N8J0 262 aa12.02□□□□□ -0.49
TRBV3-1-201ENST00000390387 MXD3Q9BW11 206 aa12.02□□□□□ -0.49
TRBV3-1-201ENST00000390387 BSDC1Q9NW68 430 aaPredicted RBP12.02□□□□□ -0.49
TRBV3-1-201ENST00000390387 CCT4P50991 539 aaKnown RBP12.01□□□□□ -0.49
TRBV3-1-201ENST00000390387 CWF19L2Q2TBE0 894 aaKnown RBP12.01□□□□□ -0.49
TRBV3-1-201ENST00000390387 PRAMEF18Q5VWM3 479 aa12.01□□□□□ -0.49
TRBV3-1-201ENST00000390387 CHMP4AQ9BY43 222 aa12.01□□□□□ -0.49
TRBV3-1-201ENST00000390387 SPEF2Q9C093 1822 aa12□□□□□ -0.49
TRBV3-1-201ENST00000390387 NEURL1BA8MQ27 555 aa12□□□□□ -0.49
TRBV3-1-201ENST00000390387 UBE2Q2LH0YL09 131 aa12□□□□□ -0.49
TRBV3-1-201ENST00000390387 WNT10BO00744 389 aa12□□□□□ -0.49
TRBV3-1-201ENST00000390387 TXNRD3Q86VQ6 643 aa12□□□□□ -0.49
TRBV3-1-201ENST00000390387 TSR2Q969E8 191 aaKnown RBP12□□□□□ -0.49
TRBV3-1-201ENST00000390387 MYH3P11055 1940 aa11.99□□□□□ -0.49
TRBV3-1-201ENST00000390387 H7C1W4 665 aa11.99□□□□□ -0.49
TRBV3-1-201ENST00000390387 SASH1O94885 1247 aa11.99□□□□□ -0.49
TRBV3-1-201ENST00000390387 KLRK1P26718 216 aa11.99□□□□□ -0.49
TRBV3-1-201ENST00000390387 NEXNQ0ZGT2 675 aa11.99□□□□□ -0.49
TRBV3-1-201ENST00000390387 STRIP1Q5VSL9 837 aa11.99□□□□□ -0.49
TRBV3-1-201ENST00000390387 G2E3Q7L622 706 aa11.99□□□□□ -0.49
TRBV3-1-201ENST00000390387 OGFOD1Q8N543 542 aa11.99□□□□□ -0.49
TRBV3-1-201ENST00000390387 FBXW7Q969H0 707 aa11.99□□□□□ -0.49
TRBV3-1-201ENST00000390387 COA1Q9GZY4 146 aa11.99□□□□□ -0.49
TRBV3-1-201ENST00000390387 MYO3BQ8WXR4 1341 aa11.99□□□□□ -0.49
TRBV3-1-201ENST00000390387 TM4SF4P48230 202 aa11.98□□□□□ -0.49
TRBV3-1-201ENST00000390387 UBE3BQ7Z3V4 1068 aa11.98□□□□□ -0.49
TRBV3-1-201ENST00000390387 ZNF296Q8WUU4 475 aaPredicted RBP11.98□□□□□ -0.49
TRBV3-1-201ENST00000390387 HPS5Q9UPZ3 1129 aa11.98□□□□□ -0.49
TRBV3-1-201ENST00000390387 LEMD3Q9Y2U8 911 aa11.98□□□□□ -0.49
TRBV3-1-201ENST00000390387 HTTP42858 3142 aa11.98□□□□□ -0.49
TRBV3-1-201ENST00000390387 ZNF804BA4D1E1 1349 aa11.97□□□□□ -0.49
TRBV3-1-201ENST00000390387 TBC1D8O95759 1140 aa11.97□□□□□ -0.49
TRBV3-1-201ENST00000390387 IGHMBP2P38935 993 aaKnown RBP11.97□□□□□ -0.49
TRBV3-1-201ENST00000390387 CASP7P55210 303 aa11.97□□□□□ -0.49
TRBV3-1-201ENST00000390387 TTLL12Q14166 644 aaPredicted RBP11.97□□□□□ -0.49
TRBV3-1-201ENST00000390387 ZBED3Q96IU2 234 aaPredicted RBP11.97□□□□□ -0.49
TRBV3-1-201ENST00000390387 PLA2G12BQ9BX93 195 aa11.97□□□□□ -0.49
TRBV3-1-201ENST00000390387 STK31Q9BXU1 1019 aa11.97□□□□□ -0.49
TRBV3-1-201ENST00000390387 ITGA6P23229 1130 aa11.96□□□□□ -0.49
TRBV3-1-201ENST00000390387 NF2P35240 595 aa11.96□□□□□ -0.49
TRBV3-1-201ENST00000390387 MMP14P50281 582 aa11.96□□□□□ -0.49
TRBV3-1-201ENST00000390387 PTPN12Q05209 780 aaKnown RBP11.96□□□□□ -0.49
TRBV3-1-201ENST00000390387 MKRN3Q13064 507 aaKnown RBP11.96□□□□□ -0.49
TRBV3-1-201ENST00000390387 GCKRQ14397 625 aa11.96□□□□□ -0.49
TRBV3-1-201ENST00000390387 TWISTNBQ3B726 338 aaPredicted RBP11.96□□□□□ -0.49
TRBV3-1-201ENST00000390387 NOM1Q5C9Z4 860 aaKnown RBP11.96□□□□□ -0.49
TRBV3-1-201ENST00000390387 TTLL5Q6EMB2 1281 aa11.96□□□□□ -0.49
TRBV3-1-201ENST00000390387 KIAA0825Q8IV33 1275 aa11.96□□□□□ -0.49
TRBV3-1-201ENST00000390387 ANKRD2Q9GZV1 360 aa11.96□□□□□ -0.49
TRBV3-1-201ENST00000390387 IRS2Q9Y4H2 1338 aa11.95□□□□□ -0.5
TRBV3-1-201ENST00000390387 GPR25O00155 361 aa11.95□□□□□ -0.5
TRBV3-1-201ENST00000390387 CSF1RP07333 972 aa11.95□□□□□ -0.5
TRBV3-1-201ENST00000390387 GTF2IP78347 998 aa11.95□□□□□ -0.5
TRBV3-1-201ENST00000390387 FLIIQ13045 1269 aa11.95□□□□□ -0.5
TRBV3-1-201ENST00000390387 PKN2Q16513 984 aaKnown RBP11.95□□□□□ -0.5
TRBV3-1-201ENST00000390387 CCDC27Q2M243 656 aa11.95□□□□□ -0.5
TRBV3-1-201ENST00000390387 APOBEC3FQ8IUX4 373 aaKnown RBP11.95□□□□□ -0.5
TRBV3-1-201ENST00000390387 CFHR5Q9BXR6 569 aa11.95□□□□□ -0.5
TRBV3-1-201ENST00000390387 HDAC9Q9UKV0 1011 aa11.95□□□□□ -0.5
TRBV3-1-201ENST00000390387 SNAP23O00161 211 aa11.94□□□□□ -0.5
TRBV3-1-201ENST00000390387 CHRNDQ07001 517 aa11.94□□□□□ -0.5
TRBV3-1-201ENST00000390387 SREBF2Q12772 1141 aa11.94□□□□□ -0.5
TRBV3-1-201ENST00000390387 PRKG1Q13976 671 aa11.94□□□□□ -0.5
TRBV3-1-201ENST00000390387 CCDC184Q52MB2 194 aa11.94□□□□□ -0.5
TRBV3-1-201ENST00000390387 LDLRAD1Q5T700 205 aa11.94□□□□□ -0.5
TRBV3-1-201ENST00000390387 WWC1Q8IX03 1113 aa11.94□□□□□ -0.5
TRBV3-1-201ENST00000390387 MPHOSPH8Q99549 860 aa11.94□□□□□ -0.5
TRBV3-1-201ENST00000390387 R3HDMLQ9H3Y0 253 aa11.94□□□□□ -0.5
TRBV3-1-201ENST00000390387 CD209Q9NNX6 404 aa11.94□□□□□ -0.5
TRBV3-1-201ENST00000390387 FZD1Q9UP38 647 aa11.94□□□□□ -0.5
TRBV3-1-201ENST00000390387 CENPFP49454 3210 aa11.94□□□□□ -0.5
TRBV3-1-201ENST00000390387 BRCA2P51587 3418 aa11.93□□□□□ -0.5
TRBV3-1-201ENST00000390387 MKI67P46013 3256 aaKnown RBP11.93□□□□□ -0.5
TRBV3-1-201ENST00000390387 SSC5DA1L4H1 1573 aa11.93□□□□□ -0.5
TRBV3-1-201ENST00000390387 KCNA4P22459 653 aa11.93□□□□□ -0.5
TRBV3-1-201ENST00000390387 KCNJ4P48050 445 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms