RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 RLBP1P12271 317 aa8.49□□□□□ -1.05
RNU6-40P-201ENST00000384254 ACPPP15309 386 aa8.49□□□□□ -1.05
RNU6-40P-201ENST00000384254 MAP2K3P46734 347 aa8.49□□□□□ -1.05
RNU6-40P-201ENST00000384254 PTPN12Q05209 780 aaKnown RBP8.49□□□□□ -1.05
RNU6-40P-201ENST00000384254 RAD51AP2Q09MP3 1159 aa8.49□□□□□ -1.05
RNU6-40P-201ENST00000384254 PWP1Q13610 501 aa8.49□□□□□ -1.05
RNU6-40P-201ENST00000384254 FAM35AQ86V20 835 aa8.49□□□□□ -1.05
RNU6-40P-201ENST00000384254 CNTNAP3BQ96NU0 1288 aa8.49□□□□□ -1.05
RNU6-40P-201ENST00000384254 NOC4LQ9BVI4 516 aaKnown RBP8.49□□□□□ -1.05
RNU6-40P-201ENST00000384254 CNTNAP3Q9BZ76 1288 aa8.49□□□□□ -1.05
RNU6-40P-201ENST00000384254 CEP44Q9C0F1 390 aa8.49□□□□□ -1.05
RNU6-40P-201ENST00000384254 CAPN10Q9HC96 672 aa8.49□□□□□ -1.05
RNU6-40P-201ENST00000384254 POTECB2RU33 542 aa8.48□□□□□ -1.05
RNU6-40P-201ENST00000384254 IGSF3O75054 1194 aa8.48□□□□□ -1.05
RNU6-40P-201ENST00000384254 ARAFP10398 606 aa8.48□□□□□ -1.05
RNU6-40P-201ENST00000384254 CPB1P15086 417 aa8.48□□□□□ -1.05
RNU6-40P-201ENST00000384254 ELMSAN1Q6PJG2 1045 aa8.48□□□□□ -1.05
RNU6-40P-201ENST00000384254 C3orf58Q8NDZ4 430 aa8.48□□□□□ -1.05
RNU6-40P-201ENST00000384254 TNFRSF25Q93038 417 aa8.48□□□□□ -1.05
RNU6-40P-201ENST00000384254 DRC1Q96MC2 740 aa8.48□□□□□ -1.05
RNU6-40P-201ENST00000384254 BHLHE41Q9C0J9 482 aaPredicted RBP8.48□□□□□ -1.05
RNU6-40P-201ENST00000384254 RASSF4Q9H2L5 321 aa8.48□□□□□ -1.05
RNU6-40P-201ENST00000384254 MBIPQ9NS73 344 aa8.48□□□□□ -1.05
RNU6-40P-201ENST00000384254 SLC6A14Q9UN76 642 aa8.48□□□□□ -1.05
RNU6-40P-201ENST00000384254 INPP5FQ9Y2H2 1132 aa8.48□□□□□ -1.05
RNU6-40P-201ENST00000384254 ZBTB42B2RXF5 422 aa8.47□□□□□ -1.05
RNU6-40P-201ENST00000384254 C2CD2LO14523 706 aa8.47□□□□□ -1.05
RNU6-40P-201ENST00000384254 TRPA1O75762 1119 aa8.47□□□□□ -1.05
RNU6-40P-201ENST00000384254 ADH7P40394 386 aa8.47□□□□□ -1.05
RNU6-40P-201ENST00000384254 ATP11AP98196 1134 aa8.47□□□□□ -1.05
RNU6-40P-201ENST00000384254 ZNF394Q53GI3 561 aa8.47□□□□□ -1.05
RNU6-40P-201ENST00000384254 CEP135Q66GS9 1140 aa8.47□□□□□ -1.05
RNU6-40P-201ENST00000384254 NPAS3Q8IXF0 933 aa8.47□□□□□ -1.05
RNU6-40P-201ENST00000384254 NXPE3Q969Y0 559 aa8.47□□□□□ -1.05
RNU6-40P-201ENST00000384254 DDX41Q9UJV9 622 aaKnown RBP8.47□□□□□ -1.05
RNU6-40P-201ENST00000384254 A0A096LPE4 126 aa8.46□□□□□ -1.06
RNU6-40P-201ENST00000384254 A0A1W2PPZ6 126 aa8.46□□□□□ -1.06
RNU6-40P-201ENST00000384254 ALAS2P22557 587 aa8.46□□□□□ -1.06
RNU6-40P-201ENST00000384254 TPTE2Q6XPS3 522 aa8.46□□□□□ -1.06
RNU6-40P-201ENST00000384254 SV2BQ7L1I2 683 aa8.46□□□□□ -1.06
RNU6-40P-201ENST00000384254 RELL1Q8IUW5 271 aa8.46□□□□□ -1.06
RNU6-40P-201ENST00000384254 ACBD3Q9H3P7 528 aa8.46□□□□□ -1.06
RNU6-40P-201ENST00000384254 PCDHGB7Q9Y5F8 929 aa8.46□□□□□ -1.06
RNU6-40P-201ENST00000384254 FBXO24O75426 580 aa8.45□□□□□ -1.06
RNU6-40P-201ENST00000384254 PTPRAP18433 802 aa8.45□□□□□ -1.06
RNU6-40P-201ENST00000384254 ITPKAP23677 461 aa8.45□□□□□ -1.06
RNU6-40P-201ENST00000384254 GRIA4P48058 902 aa8.45□□□□□ -1.06
RNU6-40P-201ENST00000384254 RPS26P11Q5JNZ5 115 aaPredicted RBP8.45□□□□□ -1.06
RNU6-40P-201ENST00000384254 ANKRD24Q8TF21 1146 aa8.45□□□□□ -1.06
RNU6-40P-201ENST00000384254 PLD4Q96BZ4 506 aa8.45□□□□□ -1.06
RNU6-40P-201ENST00000384254 HHIPQ96QV1 700 aa8.45□□□□□ -1.06
RNU6-40P-201ENST00000384254 GPN3Q9UHW5 284 aaPredicted RBP8.45□□□□□ -1.06
RNU6-40P-201ENST00000384254 NEURL1BA8MQ27 555 aa8.44□□□□□ -1.06
RNU6-40P-201ENST00000384254 METTL12A8MUP2 240 aa8.44□□□□□ -1.06
RNU6-40P-201ENST00000384254 LMNB1P20700 586 aa8.44□□□□□ -1.06
RNU6-40P-201ENST00000384254 SPRED3Q2MJR0 410 aa8.44□□□□□ -1.06
RNU6-40P-201ENST00000384254 ERMP1Q7Z2K6 904 aa8.44□□□□□ -1.06
RNU6-40P-201ENST00000384254 VPS37DQ86XT2 251 aa8.44□□□□□ -1.06
RNU6-40P-201ENST00000384254 SLC16A10Q8TF71 515 aa8.44□□□□□ -1.06
RNU6-40P-201ENST00000384254 BSNDQ8WZ55 320 aa8.44□□□□□ -1.06
RNU6-40P-201ENST00000384254 SMG9Q9H0W8 520 aaKnown RBP8.44□□□□□ -1.06
RNU6-40P-201ENST00000384254 PPP1R1BQ9UD71 204 aaPredicted RBP8.44□□□□□ -1.06
RNU6-40P-201ENST00000384254 ADARB2-AS1A8MUL3 147 aa8.43□□□□□ -1.06
RNU6-40P-201ENST00000384254 H3BM21 787 aa8.43□□□□□ -1.06
RNU6-40P-201ENST00000384254 NFKBIEO00221 500 aa8.43□□□□□ -1.06
RNU6-40P-201ENST00000384254 GBP2P32456 591 aaPredicted RBP8.43□□□□□ -1.06
RNU6-40P-201ENST00000384254 PPP2R3AQ06190 1150 aa8.43□□□□□ -1.06
RNU6-40P-201ENST00000384254 GAS6Q14393 721 aa8.43□□□□□ -1.06
RNU6-40P-201ENST00000384254 DIEXFQ68CQ4 756 aaKnown RBP8.43□□□□□ -1.06
RNU6-40P-201ENST00000384254 GOLGA6L1Q8N7Z2 621 aa8.43□□□□□ -1.06
RNU6-40P-201ENST00000384254 RSRP1Q9BUV0 290 aa8.43□□□□□ -1.06
RNU6-40P-201ENST00000384254 ZNF576Q9H609 170 aa8.43□□□□□ -1.06
RNU6-40P-201ENST00000384254 KBTBD4Q9NVX7 518 aa8.43□□□□□ -1.06
RNU6-40P-201ENST00000384254 FRRS1LQ9P0K9 344 aa8.43□□□□□ -1.06
RNU6-40P-201ENST00000384254 GDF2Q9UK05 429 aaPredicted RBP8.43□□□□□ -1.06
RNU6-40P-201ENST00000384254 SAMM50Q9Y512 469 aa8.43□□□□□ -1.06
RNU6-40P-201ENST00000384254 ELOA3CA0A087WX78 387 aaPredicted RBP8.42□□□□□ -1.06
RNU6-40P-201ENST00000384254 ELOA3DA6NLF2 546 aaPredicted RBP8.42□□□□□ -1.06
RNU6-40P-201ENST00000384254 CABP4P57796 275 aa8.42□□□□□ -1.06
RNU6-40P-201ENST00000384254 MAP3K11Q16584 847 aa8.42□□□□□ -1.06
RNU6-40P-201ENST00000384254 ELOA3BQ3SY89 546 aa8.42□□□□□ -1.06
RNU6-40P-201ENST00000384254 PERM1Q5SV97 790 aa8.42□□□□□ -1.06
RNU6-40P-201ENST00000384254 SLC43A3Q8NBI5 491 aa8.42□□□□□ -1.06
RNU6-40P-201ENST00000384254 ELOA3Q8NG57 546 aa8.42□□□□□ -1.06
RNU6-40P-201ENST00000384254 DDX54Q8TDD1 881 aaKnown RBP8.42□□□□□ -1.06
RNU6-40P-201ENST00000384254 POP1Q99575 1024 aaKnown RBP8.42□□□□□ -1.06
RNU6-40P-201ENST00000384254 TINF2Q9BSI4 451 aa8.42□□□□□ -1.06
RNU6-40P-201ENST00000384254 TANGO6Q9C0B7 1094 aa8.42□□□□□ -1.06
RNU6-40P-201ENST00000384254 CLEC4MQ9H2X3 399 aaPredicted RBP8.42□□□□□ -1.06
RNU6-40P-201ENST00000384254 GGA1Q9UJY5 639 aa8.42□□□□□ -1.06
RNU6-40P-201ENST00000384254 IGF1RP08069 1367 aa8.41□□□□□ -1.06
RNU6-40P-201ENST00000384254 LCE2BO14633 110 aa8.41□□□□□ -1.06
RNU6-40P-201ENST00000384254 RGS9O75916 674 aaPredicted RBP8.41□□□□□ -1.06
RNU6-40P-201ENST00000384254 RACK1P63244 317 aaKnown RBP8.41□□□□□ -1.06
RNU6-40P-201ENST00000384254 PSAPL1Q6NUJ1 521 aa8.41□□□□□ -1.06
RNU6-40P-201ENST00000384254 CACTIN-AS1Q8N1I8 211 aa8.41□□□□□ -1.06
RNU6-40P-201ENST00000384254 TMEM74Q96NL1 305 aa8.41□□□□□ -1.06
RNU6-40P-201ENST00000384254 SRA1Q9HD15 236 aaKnown RBP8.41□□□□□ -1.06
RNU6-40P-201ENST00000384254 COPRSQ9NQ92 184 aa8.41□□□□□ -1.06
RNU6-40P-201ENST00000384254 TMEM39AQ9NV64 488 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms