RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 POLA2Q14181 598 aa16.35■□□□□ 0.21
SNCAIP-203ENST00000379538 TPD52L1Q16890 204 aaPredicted RBP16.35■□□□□ 0.21
SNCAIP-203ENST00000379538 PRPF40BQ6NWY9 871 aaKnown RBP16.35■□□□□ 0.21
SNCAIP-203ENST00000379538 LMBR1LQ6UX01 489 aa16.35■□□□□ 0.21
SNCAIP-203ENST00000379538 ZNF594Q96JF6 807 aaPredicted RBP16.35■□□□□ 0.21
SNCAIP-203ENST00000379538 STAP2Q9UGK3 403 aa16.35■□□□□ 0.21
SNCAIP-203ENST00000379538 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.35■□□□□ 0.21
SNCAIP-203ENST00000379538 MYH14Q7Z406 1995 aaKnown RBP16.35■□□□□ 0.21
SNCAIP-203ENST00000379538 KIF6Q6ZMV9 814 aa16.35■□□□□ 0.21
SNCAIP-203ENST00000379538 PI4K2BQ8TCG2 481 aa16.35■□□□□ 0.21
SNCAIP-203ENST00000379538 TEX13AQ9BXU3 409 aaPredicted RBP16.35■□□□□ 0.21
SNCAIP-203ENST00000379538 DDX41Q9UJV9 622 aaKnown RBP16.35■□□□□ 0.21
SNCAIP-203ENST00000379538 MAP3K11Q16584 847 aa16.34■□□□□ 0.21
SNCAIP-203ENST00000379538 FEZ1Q99689 392 aa16.34■□□□□ 0.21
SNCAIP-203ENST00000379538 NUP62CLQ9H1M0 184 aa16.34■□□□□ 0.21
SNCAIP-203ENST00000379538 DNAJC25Q9H1X3 360 aa16.34■□□□□ 0.21
SNCAIP-203ENST00000379538 CCDC87Q9NVE4 849 aa16.34■□□□□ 0.21
SNCAIP-203ENST00000379538 CWC25Q9NXE8 425 aaPredicted RBP16.34■□□□□ 0.21
SNCAIP-203ENST00000379538 CASP7P55210 303 aa16.34■□□□□ 0.21
SNCAIP-203ENST00000379538 TCIRG1Q13488 830 aa16.34■□□□□ 0.21
SNCAIP-203ENST00000379538 BICDL1Q6ZP65 573 aa16.34■□□□□ 0.21
SNCAIP-203ENST00000379538 CCDC24Q8N4L8 307 aa16.34■□□□□ 0.21
SNCAIP-203ENST00000379538 CCDC112Q8NEF3 446 aa16.34■□□□□ 0.21
SNCAIP-203ENST00000379538 TRERF1Q96PN7 1200 aa16.34■□□□□ 0.21
SNCAIP-203ENST00000379538 TRMT1Q9NXH9 659 aaKnown RBP16.34■□□□□ 0.21
SNCAIP-203ENST00000379538 LAMB4A4D0S4 1761 aa16.34■□□□□ 0.21
SNCAIP-203ENST00000379538 KMT5BQ4FZB7 885 aa16.33■□□□□ 0.21
SNCAIP-203ENST00000379538 KIF18AQ8NI77 898 aa16.33■□□□□ 0.21
SNCAIP-203ENST00000379538 ZNF215Q9UL58 517 aaPredicted RBP16.33■□□□□ 0.21
SNCAIP-203ENST00000379538 MAP3K15Q6ZN16 1313 aa16.33■□□□□ 0.21
SNCAIP-203ENST00000379538 ARFGEF2Q9Y6D5 1785 aa16.33■□□□□ 0.21
SNCAIP-203ENST00000379538 SMTNL1A8MU46 457 aa16.33■□□□□ 0.2
SNCAIP-203ENST00000379538 RHPN1Q8TCX5 695 aa16.33■□□□□ 0.2
SNCAIP-203ENST00000379538 KCNJ4P48050 445 aa16.33■□□□□ 0.2
SNCAIP-203ENST00000379538 ZNF75DP51815 510 aa16.33■□□□□ 0.2
SNCAIP-203ENST00000379538 EIF5P55010 431 aaKnown RBP16.33■□□□□ 0.2
SNCAIP-203ENST00000379538 LARP1BQ659C4 914 aaKnown RBP16.33■□□□□ 0.2
SNCAIP-203ENST00000379538 TNMDQ9H2S6 317 aa16.33■□□□□ 0.2
SNCAIP-203ENST00000379538 LRRC4BQ9NT99 713 aa16.33■□□□□ 0.2
SNCAIP-203ENST00000379538 PDRG1Q9NUG6 133 aa16.33■□□□□ 0.2
SNCAIP-203ENST00000379538 ATP6V1DQ9Y5K8 247 aa16.33■□□□□ 0.2
SNCAIP-203ENST00000379538 UBN2Q6ZU65 1347 aa16.32■□□□□ 0.2
SNCAIP-203ENST00000379538 ONECUT3O60422 494 aaPredicted RBP16.32■□□□□ 0.2
SNCAIP-203ENST00000379538 CCNL1Q9UK58 526 aaPredicted RBP16.32■□□□□ 0.2
SNCAIP-203ENST00000379538 UTYO14607 1347 aa16.32■□□□□ 0.2
SNCAIP-203ENST00000379538 GIGYF2Q6Y7W6 1299 aaKnown RBP16.32■□□□□ 0.2
SNCAIP-203ENST00000379538 FBXW7Q969H0 707 aa16.32■□□□□ 0.2
SNCAIP-203ENST00000379538 CLIP2Q9UDT6 1046 aa16.32■□□□□ 0.2
SNCAIP-203ENST00000379538 SRP68Q9UHB9 627 aaKnown RBP16.32■□□□□ 0.2
SNCAIP-203ENST00000379538 TPCN1Q9ULQ1 816 aa16.32■□□□□ 0.2
SNCAIP-203ENST00000379538 TAF6LQ9Y6J9 622 aa16.32■□□□□ 0.2
SNCAIP-203ENST00000379538 H7C1W4 665 aa16.31■□□□□ 0.2
SNCAIP-203ENST00000379538 NR1I2O75469 434 aa16.31■□□□□ 0.2
SNCAIP-203ENST00000379538 SASH1O94885 1247 aa16.31■□□□□ 0.2
SNCAIP-203ENST00000379538 FOXO4P98177 505 aa16.31■□□□□ 0.2
SNCAIP-203ENST00000379538 STK3Q13188 491 aa16.31■□□□□ 0.2
SNCAIP-203ENST00000379538 IL17RAQ96F46 866 aa16.31■□□□□ 0.2
SNCAIP-203ENST00000379538 CCDC8Q9H0W5 538 aaPredicted RBP16.31■□□□□ 0.2
SNCAIP-203ENST00000379538 TLR7Q9NYK1 1049 aaKnown RBP16.31■□□□□ 0.2
SNCAIP-203ENST00000379538 IL6STP40189 918 aaPredicted RBP16.31■□□□□ 0.2
SNCAIP-203ENST00000379538 KRT27Q7Z3Y8 459 aa16.31■□□□□ 0.2
SNCAIP-203ENST00000379538 ISCA1Q9BUE6 129 aa16.31■□□□□ 0.2
SNCAIP-203ENST00000379538 TPM3P06753 285 aa16.3■□□□□ 0.2
SNCAIP-203ENST00000379538 TERF2Q15554 542 aa16.3■□□□□ 0.2
SNCAIP-203ENST00000379538 NLRP10Q86W26 655 aa16.3■□□□□ 0.2
SNCAIP-203ENST00000379538 DDX11Q96FC9 970 aa16.3■□□□□ 0.2
SNCAIP-203ENST00000379538 RGS17Q9UGC6 210 aaPredicted RBP16.3■□□□□ 0.2
SNCAIP-203ENST00000379538 TJP1Q07157 1748 aa16.3■□□□□ 0.2
SNCAIP-203ENST00000379538 AFDNP55196 1824 aaKnown RBP16.3■□□□□ 0.2
SNCAIP-203ENST00000379538 GNPATO15228 680 aa16.3■□□□□ 0.2
SNCAIP-203ENST00000379538 ZNF165P49910 485 aa16.3■□□□□ 0.2
SNCAIP-203ENST00000379538 CEBPZQ03701 1054 aaKnown RBP16.3■□□□□ 0.2
SNCAIP-203ENST00000379538 ELF2Q15723 593 aa16.3■□□□□ 0.2
SNCAIP-203ENST00000379538 CEP135Q66GS9 1140 aa16.3■□□□□ 0.2
SNCAIP-203ENST00000379538 ERCC4Q92889 916 aaPredicted RBP16.3■□□□□ 0.2
SNCAIP-203ENST00000379538 NDUFB9Q9Y6M9 179 aa16.3■□□□□ 0.2
SNCAIP-203ENST00000379538 PTPN12Q05209 780 aaKnown RBP16.29■□□□□ 0.2
SNCAIP-203ENST00000379538 FBXO38Q6PIJ6 1188 aa16.29■□□□□ 0.2
SNCAIP-203ENST00000379538 PLA2G4DQ86XP0 818 aa16.29■□□□□ 0.2
SNCAIP-203ENST00000379538 CCDC191Q8NCU4 936 aa16.29■□□□□ 0.2
SNCAIP-203ENST00000379538 PUS3Q9BZE2 481 aaKnown RBP16.29■□□□□ 0.2
SNCAIP-203ENST00000379538 TRMT112Q9UI30 125 aaKnown RBP16.29■□□□□ 0.2
SNCAIP-203ENST00000379538 CICQ96RK0 1608 aaPredicted RBP16.29■□□□□ 0.2
SNCAIP-203ENST00000379538 TUBGCP6Q96RT7 1819 aa16.29■□□□□ 0.2
SNCAIP-203ENST00000379538 MTX1Q13505 466 aa16.29■□□□□ 0.2
SNCAIP-203ENST00000379538 FILIP1Q7Z7B0 1213 aa16.29■□□□□ 0.2
SNCAIP-203ENST00000379538 MORC2Q9Y6X9 1032 aaPredicted RBP16.29■□□□□ 0.2
SNCAIP-203ENST00000379538 GOLGA6L4A6NEF3 574 aa16.28■□□□□ 0.2
SNCAIP-203ENST00000379538 RBM6P78332 1123 aaKnown RBP16.28■□□□□ 0.2
SNCAIP-203ENST00000379538 KRT85P78386 507 aa16.28■□□□□ 0.2
SNCAIP-203ENST00000379538 IRX5P78411 483 aaPredicted RBP16.28■□□□□ 0.2
SNCAIP-203ENST00000379538 LRRC24Q50LG9 513 aa16.28■□□□□ 0.2
SNCAIP-203ENST00000379538 SUSD4Q5VX71 490 aa16.28■□□□□ 0.2
SNCAIP-203ENST00000379538 LRRN4CLQ8ND94 238 aa16.28■□□□□ 0.2
SNCAIP-203ENST00000379538 SMARCC1Q92922 1105 aaPredicted RBP16.28■□□□□ 0.2
SNCAIP-203ENST00000379538 PPFIA3O75145 1194 aa16.28■□□□□ 0.2
SNCAIP-203ENST00000379538 RFX5P48382 616 aaPredicted RBP16.28■□□□□ 0.2
SNCAIP-203ENST00000379538 CAMTA2O94983 1202 aa16.27■□□□□ 0.2
SNCAIP-203ENST00000379538 FOSBP53539 338 aa16.27■□□□□ 0.2
SNCAIP-203ENST00000379538 POTEAQ6S8J7 498 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms