RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 TNNI3KQ59H18 835 aa20.54■□□□□ 0.88
CLSTN1-202ENST00000377298 FAM114A1Q8IWE2 563 aa20.54■□□□□ 0.88
CLSTN1-202ENST00000377298 CLEC11AQ9Y240 323 aa20.54■□□□□ 0.88
CLSTN1-202ENST00000377298 FPGT-TNNI3KV9GXZ4 949 aa20.54■□□□□ 0.88
CLSTN1-202ENST00000377298 ZMYM4Q5VZL5 1548 aa20.54■□□□□ 0.88
CLSTN1-202ENST00000377298 KDM5DQ9BY66 1539 aa20.54■□□□□ 0.88
CLSTN1-202ENST00000377298 CALML3P27482 149 aa20.53■□□□□ 0.88
CLSTN1-202ENST00000377298 MTIF2P46199 727 aaKnown RBP20.53■□□□□ 0.88
CLSTN1-202ENST00000377298 CLIP2Q9UDT6 1046 aa20.53■□□□□ 0.88
CLSTN1-202ENST00000377298 HCLS1P14317 486 aaPredicted RBP20.53■□□□□ 0.88
CLSTN1-202ENST00000377298 CCDC150Q8NCX0 1101 aa20.53■□□□□ 0.88
CLSTN1-202ENST00000377298 SAMD9LQ8IVG5 1584 aa20.53■□□□□ 0.88
CLSTN1-202ENST00000377298 RIMBP2O15034 1052 aa20.53■□□□□ 0.88
CLSTN1-202ENST00000377298 SYKP43405 635 aa20.53■□□□□ 0.88
CLSTN1-202ENST00000377298 USP21Q9UK80 565 aa20.53■□□□□ 0.88
CLSTN1-202ENST00000377298 BIN1O00499 593 aa20.53■□□□□ 0.88
CLSTN1-202ENST00000377298 RMND1Q9NWS8 449 aa20.53■□□□□ 0.88
CLSTN1-202ENST00000377298 C8orf34Q49A92 452 aa20.52■□□□□ 0.88
CLSTN1-202ENST00000377298 AXDND1Q5T1B0 1012 aaPredicted RBP20.52■□□□□ 0.88
CLSTN1-202ENST00000377298 TTC6Q86TZ1 520 aa20.52■□□□□ 0.88
CLSTN1-202ENST00000377298 VEZTQ9HBM0 779 aa20.52■□□□□ 0.88
CLSTN1-202ENST00000377298 YEATS4O95619 227 aa20.52■□□□□ 0.88
CLSTN1-202ENST00000377298 NAPAP54920 295 aa20.52■□□□□ 0.88
CLSTN1-202ENST00000377298 C6orf50Q9HD87 102 aa20.52■□□□□ 0.88
CLSTN1-202ENST00000377298 ZNF165P49910 485 aa20.52■□□□□ 0.88
CLSTN1-202ENST00000377298 GCKRQ14397 625 aa20.52■□□□□ 0.88
CLSTN1-202ENST00000377298 AOX1Q06278 1338 aa20.52■□□□□ 0.87
CLSTN1-202ENST00000377298 TIMM10P62072 90 aa20.51■□□□□ 0.87
CLSTN1-202ENST00000377298 CCDC40Q4G0X9 1142 aa20.51■□□□□ 0.87
CLSTN1-202ENST00000377298 NEMFO60524 1076 aa20.51■□□□□ 0.87
CLSTN1-202ENST00000377298 HIBADHP31937 336 aaKnown RBP20.51■□□□□ 0.87
CLSTN1-202ENST00000377298 NF2P35240 595 aa20.51■□□□□ 0.87
CLSTN1-202ENST00000377298 SSR1P43307 286 aaKnown RBP20.5■□□□□ 0.87
CLSTN1-202ENST00000377298 NUP88Q99567 741 aaPredicted RBP20.5■□□□□ 0.87
CLSTN1-202ENST00000377298 TBCAO75347 108 aaKnown RBP20.5■□□□□ 0.87
CLSTN1-202ENST00000377298 PRKCSHP14314 528 aaPredicted RBP20.5■□□□□ 0.87
CLSTN1-202ENST00000377298 GSDMDP57764 484 aa20.5■□□□□ 0.87
CLSTN1-202ENST00000377298 SKIDA1Q1XH10 827 aa20.5■□□□□ 0.87
CLSTN1-202ENST00000377298 NEBLO76041 1014 aa20.5■□□□□ 0.87
CLSTN1-202ENST00000377298 UFL1O94874 794 aa20.5■□□□□ 0.87
CLSTN1-202ENST00000377298 METP08581 1390 aa20.5■□□□□ 0.87
CLSTN1-202ENST00000377298 TMEM94Q12767 1356 aa20.5■□□□□ 0.87
CLSTN1-202ENST00000377298 PTPN14Q15678 1187 aa20.5■□□□□ 0.87
CLSTN1-202ENST00000377298 RRP36Q96EU6 259 aaKnown RBP20.5■□□□□ 0.87
CLSTN1-202ENST00000377298 KIF5CO60282 957 aa20.49■□□□□ 0.87
CLSTN1-202ENST00000377298 MBD4O95243 580 aa20.49■□□□□ 0.87
CLSTN1-202ENST00000377298 USP25Q9UHP3 1055 aa20.49■□□□□ 0.87
CLSTN1-202ENST00000377298 FAM135BQ49AJ0 1406 aa20.49■□□□□ 0.87
CLSTN1-202ENST00000377298 AK2P54819 239 aa20.49■□□□□ 0.87
CLSTN1-202ENST00000377298 RUFY3Q7L099 469 aa20.49■□□□□ 0.87
CLSTN1-202ENST00000377298 TMEM87AQ8NBN3 555 aa20.49■□□□□ 0.87
CLSTN1-202ENST00000377298 MRPS27Q92552 414 aaKnown RBP20.49■□□□□ 0.87
CLSTN1-202ENST00000377298 CFAP65Q6ZU64 1925 aaKnown RBP20.49■□□□□ 0.87
CLSTN1-202ENST00000377298 F13A1P00488 732 aa20.49■□□□□ 0.87
CLSTN1-202ENST00000377298 PHKG2P15735 406 aa20.49■□□□□ 0.87
CLSTN1-202ENST00000377298 SMARCC2Q8TAQ2 1214 aa20.49■□□□□ 0.87
CLSTN1-202ENST00000377298 EXOC1Q9NV70 894 aa20.49■□□□□ 0.87
CLSTN1-202ENST00000377298 KDM5AP29375 1690 aaKnown RBP20.48■□□□□ 0.87
CLSTN1-202ENST00000377298 TRIM75PA6NK02 468 aa20.48■□□□□ 0.87
CLSTN1-202ENST00000377298 USO1O60763 962 aaKnown RBP20.48■□□□□ 0.87
CLSTN1-202ENST00000377298 DBNDD2Q9BQY9 259 aa20.48■□□□□ 0.87
CLSTN1-202ENST00000377298 GGA1Q9UJY5 639 aa20.48■□□□□ 0.87
CLSTN1-202ENST00000377298 NPHP4O75161 1426 aaPredicted RBP20.48■□□□□ 0.87
CLSTN1-202ENST00000377298 EIF3JO75822 258 aaKnown RBP20.48■□□□□ 0.87
CLSTN1-202ENST00000377298 SYCP3Q8IZU3 236 aa20.48■□□□□ 0.87
CLSTN1-202ENST00000377298 XAGE2Q96GT9 111 aa20.48■□□□□ 0.87
CLSTN1-202ENST00000377298 SUCLG2Q96I99 432 aa20.48■□□□□ 0.87
CLSTN1-202ENST00000377298 UVSSAQ2YD98 709 aa20.48■□□□□ 0.87
CLSTN1-202ENST00000377298 TCERG1LQ5VWI1 586 aa20.48■□□□□ 0.87
CLSTN1-202ENST00000377298 TNNI2P48788 182 aa20.47■□□□□ 0.87
CLSTN1-202ENST00000377298 CERS3Q8IU89 383 aa20.47■□□□□ 0.87
CLSTN1-202ENST00000377298 NLRP1Q9C000 1473 aa20.47■□□□□ 0.87
CLSTN1-202ENST00000377298 MYOM2P54296 1465 aa20.47■□□□□ 0.87
CLSTN1-202ENST00000377298 BLMP54132 1417 aaPredicted RBP20.47■□□□□ 0.87
CLSTN1-202ENST00000377298 NEFHP12036 1026 aa20.47■□□□□ 0.87
CLSTN1-202ENST00000377298 TDRD12Q587J7 1177 aaKnown RBP20.47■□□□□ 0.87
CLSTN1-202ENST00000377298 LPIN2Q92539 896 aa20.47■□□□□ 0.87
CLSTN1-202ENST00000377298 INTS4Q96HW7 963 aaKnown RBP20.47■□□□□ 0.87
CLSTN1-202ENST00000377298 USP26Q9BXU7 913 aa20.47■□□□□ 0.87
CLSTN1-202ENST00000377298 STAT6P42226 847 aa20.47■□□□□ 0.87
CLSTN1-202ENST00000377298 APOBRQ0VD83 1088 aa20.47■□□□□ 0.87
CLSTN1-202ENST00000377298 AATKQ6ZMQ8 1374 aa20.46■□□□□ 0.87
CLSTN1-202ENST00000377298 GRM1Q13255 1194 aa20.46■□□□□ 0.87
CLSTN1-202ENST00000377298 UBXN4Q92575 508 aa20.46■□□□□ 0.87
CLSTN1-202ENST00000377298 LIG1P18858 919 aa20.46■□□□□ 0.87
CLSTN1-202ENST00000377298 TEX11Q8IYF3 940 aa20.46■□□□□ 0.87
CLSTN1-202ENST00000377298 KIF24Q5T7B8 1368 aa20.46■□□□□ 0.87
CLSTN1-202ENST00000377298 UGGT1Q9NYU2 1555 aa20.46■□□□□ 0.87
CLSTN1-202ENST00000377298 B4DLN1 442 aa20.46■□□□□ 0.87
CLSTN1-202ENST00000377298 GNA11P29992 359 aa20.46■□□□□ 0.87
CLSTN1-202ENST00000377298 MRPL12P52815 198 aaKnown RBP20.46■□□□□ 0.87
CLSTN1-202ENST00000377298 TRMT1LQ7Z2T5 733 aaKnown RBP20.46■□□□□ 0.87
CLSTN1-202ENST00000377298 APPBP2Q92624 585 aa20.46■□□□□ 0.87
CLSTN1-202ENST00000377298 RBM28Q9NW13 759 aaKnown RBP20.46■□□□□ 0.87
CLSTN1-202ENST00000377298 WDR66Q8TBY9 1149 aa20.46■□□□□ 0.87
CLSTN1-202ENST00000377298 MAST3O60307 1309 aa20.45■□□□□ 0.86
CLSTN1-202ENST00000377298 GIGYF1O75420 1035 aaPredicted RBP20.45■□□□□ 0.86
CLSTN1-202ENST00000377298 CPLX3Q8WVH0 158 aa20.45■□□□□ 0.86
CLSTN1-202ENST00000377298 CNPY2Q9Y2B0 182 aa20.45■□□□□ 0.86
CLSTN1-202ENST00000377298 TTC37Q6PGP7 1564 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms