RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 IGHMBP2P38935 993 aaKnown RBP15.29■□□□□ 0.04
VRK3-202ENST00000377011 EIF6P56537 245 aaKnown RBP15.29■□□□□ 0.04
VRK3-202ENST00000377011 IFIT5Q13325 482 aaKnown RBP15.29■□□□□ 0.04
VRK3-202ENST00000377011 IRS2Q9Y4H2 1338 aa15.29■□□□□ 0.04
VRK3-202ENST00000377011 ADAMTSL1Q8N6G6 1762 aa15.29■□□□□ 0.04
VRK3-202ENST00000377011 CCT4P50991 539 aaKnown RBP15.29■□□□□ 0.04
VRK3-202ENST00000377011 LRRC24Q50LG9 513 aa15.29■□□□□ 0.04
VRK3-202ENST00000377011 API5Q9BZZ5 524 aaKnown RBP15.29■□□□□ 0.04
VRK3-202ENST00000377011 PSMD14O00487 310 aa15.28■□□□□ 0.04
VRK3-202ENST00000377011 IPO8O15397 1037 aaKnown RBP15.28■□□□□ 0.04
VRK3-202ENST00000377011 RFX5P48382 616 aaPredicted RBP15.28■□□□□ 0.04
VRK3-202ENST00000377011 GMPSP49915 693 aaPredicted RBP15.28■□□□□ 0.04
VRK3-202ENST00000377011 ATF7IPQ6VMQ6 1270 aa15.28■□□□□ 0.04
VRK3-202ENST00000377011 RBM46Q8TBY0 533 aaKnown RBP15.28■□□□□ 0.04
VRK3-202ENST00000377011 MPHOSPH8Q99549 860 aa15.28■□□□□ 0.04
VRK3-202ENST00000377011 MXD3Q9BW11 206 aa15.28■□□□□ 0.04
VRK3-202ENST00000377011 VPS33BQ9H267 617 aa15.28■□□□□ 0.04
VRK3-202ENST00000377011 EGFRP00533 1210 aa15.27■□□□□ 0.04
VRK3-202ENST00000377011 INTS3Q68E01 1043 aaKnown RBP15.27■□□□□ 0.04
VRK3-202ENST00000377011 TMEM57Q8N5G2 664 aa15.27■□□□□ 0.04
VRK3-202ENST00000377011 ARHGAP45Q92619 1136 aa15.27■□□□□ 0.04
VRK3-202ENST00000377011 LRRFIP2Q9Y608 721 aaKnown RBP15.27■□□□□ 0.04
VRK3-202ENST00000377011 ATP2B4P23634 1241 aa15.26■□□□□ 0.03
VRK3-202ENST00000377011 EPHX2P34913 555 aa15.26■□□□□ 0.03
VRK3-202ENST00000377011 FMR1Q06787 632 aaKnown RBP eCLIP15.26■□□□□ 0.03
VRK3-202ENST00000377011 GSE1Q14687 1217 aa15.26■□□□□ 0.03
VRK3-202ENST00000377011 CCDC57Q2TAC2 916 aa15.26■□□□□ 0.03
VRK3-202ENST00000377011 CIAPIN1Q6FI81 312 aa15.26■□□□□ 0.03
VRK3-202ENST00000377011 C16orf71Q8IYS4 520 aaPredicted RBP15.26■□□□□ 0.03
VRK3-202ENST00000377011 ZC3H12CQ9C0D7 883 aaKnown RBP15.26■□□□□ 0.03
VRK3-202ENST00000377011 ZNF804BA4D1E1 1349 aa15.26■□□□□ 0.03
VRK3-202ENST00000377011 EAPPQ56P03 285 aaPredicted RBP15.26■□□□□ 0.03
VRK3-202ENST00000377011 LDHAL6AQ6ZMR3 332 aa15.26■□□□□ 0.03
VRK3-202ENST00000377011 CHMP4BQ9H444 224 aaKnown RBP15.26■□□□□ 0.03
VRK3-202ENST00000377011 HACL1Q9UJ83 578 aa15.26■□□□□ 0.03
VRK3-202ENST00000377011 PSME4Q14997 1843 aa15.25■□□□□ 0.03
VRK3-202ENST00000377011 HIRAP54198 1017 aaPredicted RBP15.25■□□□□ 0.03
VRK3-202ENST00000377011 TBC1D32Q96NH3 1257 aa15.25■□□□□ 0.03
VRK3-202ENST00000377011 EYA3Q99504 573 aa15.25■□□□□ 0.03
VRK3-202ENST00000377011 GPRC5DQ9NZD1 345 aa15.25■□□□□ 0.03
VRK3-202ENST00000377011 RIPOR2Q9Y4F9 1068 aa15.25■□□□□ 0.03
VRK3-202ENST00000377011 MED23Q9ULK4 1368 aa15.24■□□□□ 0.03
VRK3-202ENST00000377011 DLK2Q6UY11 383 aa15.24■□□□□ 0.03
VRK3-202ENST00000377011 TRPM4Q8TD43 1214 aa15.24■□□□□ 0.03
VRK3-202ENST00000377011 UBTFL1P0CB47 393 aaPredicted RBP15.23■□□□□ 0.03
VRK3-202ENST00000377011 HSPA6P17066 643 aa15.23■□□□□ 0.03
VRK3-202ENST00000377011 SLC4A3P48751 1232 aa15.23■□□□□ 0.03
VRK3-202ENST00000377011 PTPN12Q05209 780 aaKnown RBP15.23■□□□□ 0.03
VRK3-202ENST00000377011 MAP1SQ66K74 1059 aaPredicted RBP15.23■□□□□ 0.03
VRK3-202ENST00000377011 SMC5Q8IY18 1101 aa15.23■□□□□ 0.03
VRK3-202ENST00000377011 CNNM1Q9NRU3 951 aa15.23■□□□□ 0.03
VRK3-202ENST00000377011 PA2G4Q9UQ80 394 aaKnown RBP15.23■□□□□ 0.03
VRK3-202ENST00000377011 TAF7LQ5H9L4 462 aa15.23■□□□□ 0.03
VRK3-202ENST00000377011 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.23■□□□□ 0.03
VRK3-202ENST00000377011 IQCA1LA6NCM1 817 aa15.22■□□□□ 0.03
VRK3-202ENST00000377011 SAMD7Q7Z3H4 446 aa15.22■□□□□ 0.03
VRK3-202ENST00000377011 VGLL2Q8N8G2 317 aa15.22■□□□□ 0.03
VRK3-202ENST00000377011 SMC1BQ8NDV3 1235 aa15.22■□□□□ 0.03
VRK3-202ENST00000377011 ANKRD2Q9GZV1 360 aa15.22■□□□□ 0.03
VRK3-202ENST00000377011 C1orf115Q9H7X2 142 aa15.22■□□□□ 0.03
VRK3-202ENST00000377011 JAG2Q9Y219 1238 aa15.22■□□□□ 0.03
VRK3-202ENST00000377011 LEMD3Q9Y2U8 911 aa15.22■□□□□ 0.03
VRK3-202ENST00000377011 ASTN2O75129 1339 aaPredicted RBP15.21■□□□□ 0.03
VRK3-202ENST00000377011 VIL1P09327 827 aaKnown RBP15.21■□□□□ 0.03
VRK3-202ENST00000377011 CHADLQ6NUI6 762 aa15.21■□□□□ 0.03
VRK3-202ENST00000377011 ATG9AQ7Z3C6 839 aa15.21■□□□□ 0.03
VRK3-202ENST00000377011 MICALL2Q8IY33 904 aa15.21■□□□□ 0.03
VRK3-202ENST00000377011 CNOT7Q9UIV1 285 aaKnown RBP15.21■□□□□ 0.03
VRK3-202ENST00000377011 SEC24BO95487 1268 aa15.2■□□□□ 0.02
VRK3-202ENST00000377011 ITGBL1O95965 494 aaPredicted RBP15.2■□□□□ 0.02
VRK3-202ENST00000377011 FSTL1Q12841 308 aa15.2■□□□□ 0.02
VRK3-202ENST00000377011 SIL1Q9H173 461 aa15.2■□□□□ 0.02
VRK3-202ENST00000377011 ZBTB40Q9NUA8 1239 aa15.2■□□□□ 0.02
VRK3-202ENST00000377011 POLR2AP24928 1970 aaKnown RBP15.2■□□□□ 0.02
VRK3-202ENST00000377011 GYG1P46976 350 aa15.2■□□□□ 0.02
VRK3-202ENST00000377011 TNIP1Q15025 636 aa15.2■□□□□ 0.02
VRK3-202ENST00000377011 TBC1D10BQ4KMP7 808 aaPredicted RBP15.2■□□□□ 0.02
VRK3-202ENST00000377011 LDHDQ86WU2 507 aa15.2■□□□□ 0.02
VRK3-202ENST00000377011 ITPRIPQ8IWB1 547 aa15.2■□□□□ 0.02
VRK3-202ENST00000377011 GMLQ99445 158 aa15.2■□□□□ 0.02
VRK3-202ENST00000377011 CLEC11AQ9Y240 323 aa15.2■□□□□ 0.02
VRK3-202ENST00000377011 PNMA6EA0A0J9YXQ4 647 aa15.19■□□□□ 0.02
VRK3-202ENST00000377011 LMOD1P29536 600 aaPredicted RBP15.19■□□□□ 0.02
VRK3-202ENST00000377011 KCNJ4P48050 445 aa15.19■□□□□ 0.02
VRK3-202ENST00000377011 DACT2Q5SW24 774 aa15.19■□□□□ 0.02
VRK3-202ENST00000377011 RBM26Q5T8P6 1007 aaKnown RBP15.19■□□□□ 0.02
VRK3-202ENST00000377011 CD209Q9NNX6 404 aa15.19■□□□□ 0.02
VRK3-202ENST00000377011 G3V3G9 751 aa15.18■□□□□ 0.02
VRK3-202ENST00000377011 TRAF5O00463 557 aa15.18■□□□□ 0.02
VRK3-202ENST00000377011 DCAF8Q5TAQ9 597 aa15.18■□□□□ 0.02
VRK3-202ENST00000377011 RSBN1LQ6PCB5 846 aaPredicted RBP15.18■□□□□ 0.02
VRK3-202ENST00000377011 CERS5Q8N5B7 392 aa15.18■□□□□ 0.02
VRK3-202ENST00000377011 ADARB2Q9NS39 739 aaKnown RBP15.18■□□□□ 0.02
VRK3-202ENST00000377011 SCAF8Q9UPN6 1271 aaKnown RBP15.18■□□□□ 0.02
VRK3-202ENST00000377011 PASKQ96RG2 1323 aa15.18■□□□□ 0.02
VRK3-202ENST00000377011 EYA2O00167 538 aa15.17■□□□□ 0.02
VRK3-202ENST00000377011 PODNQ7Z5L7 613 aa15.17■□□□□ 0.02
VRK3-202ENST00000377011 FBXW7Q969H0 707 aa15.17■□□□□ 0.02
VRK3-202ENST00000377011 COA1Q9GZY4 146 aa15.17■□□□□ 0.02
VRK3-202ENST00000377011 PCDHAC2Q9Y5I4 1007 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms