RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 WDR70Q9NW82 654 aa10.97□□□□□ -0.65
SNX27-201ENST00000368838 ABT1Q9ULW3 272 aaKnown RBP10.97□□□□□ -0.65
SNX27-201ENST00000368838 SH3TC1Q8TE82 1336 aa10.96□□□□□ -0.65
SNX27-201ENST00000368838 SHTN1A0MZ66 631 aa10.96□□□□□ -0.65
SNX27-201ENST00000368838 RAD17O75943 681 aa10.96□□□□□ -0.65
SNX27-201ENST00000368838 CXCL9Q07325 125 aa10.96□□□□□ -0.65
SNX27-201ENST00000368838 DDX46Q7L014 1031 aaKnown RBP10.96□□□□□ -0.65
SNX27-201ENST00000368838 MPNDQ8N594 471 aa10.96□□□□□ -0.65
SNX27-201ENST00000368838 LINS1Q8NG48 757 aa10.96□□□□□ -0.65
SNX27-201ENST00000368838 FAM89AQ96GI7 184 aa10.96□□□□□ -0.65
SNX27-201ENST00000368838 GPR101Q96P66 508 aaPredicted RBP10.96□□□□□ -0.65
SNX27-201ENST00000368838 PSME4Q14997 1843 aa10.95□□□□□ -0.66
SNX27-201ENST00000368838 RIMBP2O15034 1052 aa10.95□□□□□ -0.66
SNX27-201ENST00000368838 IGHDP01880 384 aa10.95□□□□□ -0.66
SNX27-201ENST00000368838 GMPSP49915 693 aaPredicted RBP10.95□□□□□ -0.66
SNX27-201ENST00000368838 MTX1Q13505 466 aa10.95□□□□□ -0.66
SNX27-201ENST00000368838 ANKRD13DQ6ZTN6 518 aa10.95□□□□□ -0.66
SNX27-201ENST00000368838 SP8Q8IXZ3 490 aa10.95□□□□□ -0.66
SNX27-201ENST00000368838 ANKRD44Q8N8A2 993 aa10.95□□□□□ -0.66
SNX27-201ENST00000368838 PLBD2Q8NHP8 589 aa10.95□□□□□ -0.66
SNX27-201ENST00000368838 JARID2Q92833 1246 aaPredicted RBP10.95□□□□□ -0.66
SNX27-201ENST00000368838 CELF1Q92879 486 aaKnown RBP10.95□□□□□ -0.66
SNX27-201ENST00000368838 SRCIN1Q9C0H9 1055 aa10.95□□□□□ -0.66
SNX27-201ENST00000368838 ZNRF3Q9ULT6 936 aa10.95□□□□□ -0.66
SNX27-201ENST00000368838 PI4KAP2A4QPH2 592 aa10.94□□□□□ -0.66
SNX27-201ENST00000368838 PPP1R37O75864 691 aa10.94□□□□□ -0.66
SNX27-201ENST00000368838 BBOX1O75936 387 aa10.94□□□□□ -0.66
SNX27-201ENST00000368838 TRIM28Q13263 835 aaKnown RBP10.94□□□□□ -0.66
SNX27-201ENST00000368838 GRAPQ13588 217 aa10.94□□□□□ -0.66
SNX27-201ENST00000368838 DEFB115Q30KQ5 88 aa10.94□□□□□ -0.66
SNX27-201ENST00000368838 GRIPAP1Q4V328 841 aa10.94□□□□□ -0.66
SNX27-201ENST00000368838 PI4KAP1Q8N8J0 262 aa10.94□□□□□ -0.66
SNX27-201ENST00000368838 GRAPLQ8TC17 118 aaPredicted RBP10.94□□□□□ -0.66
SNX27-201ENST00000368838 AIDAQ96BJ3 306 aa10.94□□□□□ -0.66
SNX27-201ENST00000368838 USP44Q9H0E7 712 aa10.94□□□□□ -0.66
SNX27-201ENST00000368838 DCTPP1Q9H773 170 aa10.94□□□□□ -0.66
SNX27-201ENST00000368838 PHAXQ9H814 394 aaKnown RBP10.94□□□□□ -0.66
SNX27-201ENST00000368838 GPRC5DQ9NZD1 345 aa10.94□□□□□ -0.66
SNX27-201ENST00000368838 WDR33Q9C0J8 1336 aaKnown RBP10.94□□□□□ -0.66
SNX27-201ENST00000368838 THSD7BQ9C0I4 1608 aa10.93□□□□□ -0.66
SNX27-201ENST00000368838 YDJCA8MPS7 323 aa10.93□□□□□ -0.66
SNX27-201ENST00000368838 GNAI2P04899 355 aa10.93□□□□□ -0.66
SNX27-201ENST00000368838 LBX1P52954 281 aa10.93□□□□□ -0.66
SNX27-201ENST00000368838 PDAP1Q13442 181 aaKnown RBP10.93□□□□□ -0.66
SNX27-201ENST00000368838 CIAPIN1Q6FI81 312 aa10.93□□□□□ -0.66
SNX27-201ENST00000368838 DLK2Q6UY11 383 aa10.93□□□□□ -0.66
SNX27-201ENST00000368838 SUPT20HQ8NEM7 779 aa10.93□□□□□ -0.66
SNX27-201ENST00000368838 CCDC85AQ96PX6 553 aaPredicted RBP10.93□□□□□ -0.66
SNX27-201ENST00000368838 ISCA1Q9BUE6 129 aa10.93□□□□□ -0.66
SNX27-201ENST00000368838 GLIS2Q9BZE0 524 aaPredicted RBP10.93□□□□□ -0.66
SNX27-201ENST00000368838 DBNDD1Q9H9R9 158 aa10.93□□□□□ -0.66
SNX27-201ENST00000368838 NSFL1CQ9UNZ2 370 aaKnown RBP10.93□□□□□ -0.66
SNX27-201ENST00000368838 RASSF10A6NK89 507 aa10.92□□□□□ -0.66
SNX27-201ENST00000368838 HMMRO75330 724 aa10.92□□□□□ -0.66
SNX27-201ENST00000368838 GPSM2P81274 684 aa10.92□□□□□ -0.66
SNX27-201ENST00000368838 KIAA2012Q0VF49 1180 aa10.92□□□□□ -0.66
SNX27-201ENST00000368838 DOK7Q18PE1 504 aa10.92□□□□□ -0.66
SNX27-201ENST00000368838 CST9Q5W186 159 aa10.92□□□□□ -0.66
SNX27-201ENST00000368838 CYP4F22Q6NT55 531 aa10.92□□□□□ -0.66
SNX27-201ENST00000368838 CEP85Q6P2H3 762 aa10.92□□□□□ -0.66
SNX27-201ENST00000368838 USP50Q70EL3 339 aaPredicted RBP10.92□□□□□ -0.66
SNX27-201ENST00000368838 RIC3Q7Z5B4 369 aa10.92□□□□□ -0.66
SNX27-201ENST00000368838 ZNF467Q7Z7K2 595 aaPredicted RBP10.92□□□□□ -0.66
SNX27-201ENST00000368838 SIRT2Q8IXJ6 389 aa10.92□□□□□ -0.66
SNX27-201ENST00000368838 TRPM4Q8TD43 1214 aa10.92□□□□□ -0.66
SNX27-201ENST00000368838 METTL22Q9BUU2 404 aaPredicted RBP10.92□□□□□ -0.66
SNX27-201ENST00000368838 RTFDC1Q9BY42 306 aaPredicted RBP10.92□□□□□ -0.66
SNX27-201ENST00000368838 ZNF408Q9H9D4 720 aa10.92□□□□□ -0.66
SNX27-201ENST00000368838 AKAP11Q9UKA4 1901 aa10.92□□□□□ -0.66
SNX27-201ENST00000368838 F6X3S4 739 aa10.91□□□□□ -0.66
SNX27-201ENST00000368838 C6orf229H3BNL8 230 aa10.91□□□□□ -0.66
SNX27-201ENST00000368838 IRS4O14654 1257 aaPredicted RBP10.91□□□□□ -0.66
SNX27-201ENST00000368838 CTCFP49711 727 aaPredicted RBP10.91□□□□□ -0.66
SNX27-201ENST00000368838 HIRAP54198 1017 aaPredicted RBP10.91□□□□□ -0.66
SNX27-201ENST00000368838 CAPNS2Q96L46 248 aa10.91□□□□□ -0.66
SNX27-201ENST00000368838 MYD88Q99836 296 aa10.91□□□□□ -0.66
SNX27-201ENST00000368838 SEC31BQ9NQW1 1179 aa10.91□□□□□ -0.66
SNX27-201ENST00000368838 KCNQ5Q9NR82 932 aa10.91□□□□□ -0.66
SNX27-201ENST00000368838 ADARB2Q9NS39 739 aaKnown RBP10.91□□□□□ -0.66
SNX27-201ENST00000368838 TSKSQ9UJT2 592 aa10.91□□□□□ -0.66
SNX27-201ENST00000368838 ZNF646O15015 1829 aaPredicted RBP10.9□□□□□ -0.66
SNX27-201ENST00000368838 AOC2O75106 756 aa10.9□□□□□ -0.66
SNX27-201ENST00000368838 ATP8B2P98198 1209 aa10.9□□□□□ -0.66
SNX27-201ENST00000368838 NEXNQ0ZGT2 675 aa10.9□□□□□ -0.66
SNX27-201ENST00000368838 SAMD7Q7Z3H4 446 aa10.9□□□□□ -0.66
SNX27-201ENST00000368838 MEIS3Q99687 375 aa10.9□□□□□ -0.66
SNX27-201ENST00000368838 WBP1LQ9NX94 342 aa10.9□□□□□ -0.66
SNX27-201ENST00000368838 POLLQ9UGP5 575 aa10.9□□□□□ -0.66
SNX27-201ENST00000368838 CNOT7Q9UIV1 285 aaKnown RBP10.9□□□□□ -0.66
SNX27-201ENST00000368838 MAP3K2Q9Y2U5 619 aa10.9□□□□□ -0.66
SNX27-201ENST00000368838 PSMD14O00487 310 aa10.89□□□□□ -0.67
SNX27-201ENST00000368838 CELF2O95319 508 aaKnown RBP10.89□□□□□ -0.67
SNX27-201ENST00000368838 EGFRP00533 1210 aa10.89□□□□□ -0.67
SNX27-201ENST00000368838 HSPA8P11142 646 aaKnown RBP10.89□□□□□ -0.67
SNX27-201ENST00000368838 NUCB1Q02818 461 aa10.89□□□□□ -0.67
SNX27-201ENST00000368838 TNIP1Q15025 636 aa10.89□□□□□ -0.67
SNX27-201ENST00000368838 SF3B3Q15393 1217 aaKnown RBP10.89□□□□□ -0.67
SNX27-201ENST00000368838 WASHC4Q2M389 1173 aa10.89□□□□□ -0.67
SNX27-201ENST00000368838 TBC1D10BQ4KMP7 808 aaPredicted RBP10.89□□□□□ -0.67
SNX27-201ENST00000368838 RBM26Q5T8P6 1007 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms