RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 NBPF6Q5VWK0 638 aa12.4□□□□□ -0.42
EBF3-202ENST00000368648 CREB3L3Q68CJ9 461 aa12.4□□□□□ -0.42
EBF3-202ENST00000368648 TTC6Q86TZ1 520 aa12.4□□□□□ -0.42
EBF3-202ENST00000368648 NBPF5PQ86XG9 351 aaPredicted RBP12.4□□□□□ -0.42
EBF3-202ENST00000368648 UNC5CLQ8IV45 518 aa12.4□□□□□ -0.42
EBF3-202ENST00000368648 TRIM22Q8IYM9 498 aa12.4□□□□□ -0.42
EBF3-202ENST00000368648 CCDC148Q8NFR7 591 aa12.4□□□□□ -0.42
EBF3-202ENST00000368648 MRPS27Q92552 414 aaKnown RBP12.4□□□□□ -0.42
EBF3-202ENST00000368648 NBPF4Q96M43 638 aa12.4□□□□□ -0.42
EBF3-202ENST00000368648 FAM227BQ96M60 508 aa12.4□□□□□ -0.42
EBF3-202ENST00000368648 ST7Q9NRC1 585 aa12.4□□□□□ -0.42
EBF3-202ENST00000368648 IL16Q14005 1332 aa12.4□□□□□ -0.42
EBF3-202ENST00000368648 GOLGA8FQ08AF8 430 aa12.4□□□□□ -0.42
EBF3-202ENST00000368648 GOLGA8DPQ0D2H9 430 aa12.4□□□□□ -0.42
EBF3-202ENST00000368648 SART3Q15020 963 aaKnown RBP12.4□□□□□ -0.42
EBF3-202ENST00000368648 CT47A1Q5JQC4 288 aaPredicted RBP12.4□□□□□ -0.42
EBF3-202ENST00000368648 ZNF569Q5MCW4 686 aa12.4□□□□□ -0.42
EBF3-202ENST00000368648 EVI5LQ96CN4 794 aa12.4□□□□□ -0.42
EBF3-202ENST00000368648 GBP3Q9H0R5 595 aa12.4□□□□□ -0.42
EBF3-202ENST00000368648 PHAXQ9H814 394 aaKnown RBP12.4□□□□□ -0.42
EBF3-202ENST00000368648 IFIT1P09914 478 aaKnown RBP12.4□□□□□ -0.42
EBF3-202ENST00000368648 EPS15P42566 896 aa12.4□□□□□ -0.42
EBF3-202ENST00000368648 KLHDC4Q8TBB5 520 aa12.4□□□□□ -0.42
EBF3-202ENST00000368648 ZNF622Q969S3 477 aaKnown RBP eCLIP12.4□□□□□ -0.42
EBF3-202ENST00000368648 SIRT1Q96EB6 747 aa12.4□□□□□ -0.42
EBF3-202ENST00000368648 CWC25Q9NXE8 425 aaPredicted RBP12.4□□□□□ -0.42
EBF3-202ENST00000368648 LRRIQ1Q96JM4 1722 aa12.4□□□□□ -0.42
EBF3-202ENST00000368648 TDO2P48775 406 aa12.39□□□□□ -0.43
EBF3-202ENST00000368648 ATP8B2P98198 1209 aa12.39□□□□□ -0.43
EBF3-202ENST00000368648 CCDC129Q6ZRS4 1044 aa12.39□□□□□ -0.43
EBF3-202ENST00000368648 PLEKHA4Q9H4M7 779 aa12.39□□□□□ -0.43
EBF3-202ENST00000368648 PTPRCP08575 1304 aa12.39□□□□□ -0.43
EBF3-202ENST00000368648 SPECC1Q5M775 1068 aa12.39□□□□□ -0.43
EBF3-202ENST00000368648 ATRIPQ8WXE1 791 aa12.39□□□□□ -0.43
EBF3-202ENST00000368648 U3KPZ7 1027 aaPredicted RBP12.39□□□□□ -0.43
EBF3-202ENST00000368648 DIP2CQ9Y2E4 1556 aa12.39□□□□□ -0.43
EBF3-202ENST00000368648 LEO1Q8WVC0 666 aaPredicted RBP12.39□□□□□ -0.43
EBF3-202ENST00000368648 NACAP1Q9BZK3 213 aa12.39□□□□□ -0.43
EBF3-202ENST00000368648 ANKRD18BA2A2Z9 1011 aa12.39□□□□□ -0.43
EBF3-202ENST00000368648 HLTFQ14527 1009 aaKnown RBP eCLIP12.39□□□□□ -0.43
EBF3-202ENST00000368648 SIRT2Q8IXJ6 389 aa12.39□□□□□ -0.43
EBF3-202ENST00000368648 EDC3Q96F86 508 aaKnown RBP12.39□□□□□ -0.43
EBF3-202ENST00000368648 ZCCHC17Q9NP64 241 aaKnown RBP12.39□□□□□ -0.43
EBF3-202ENST00000368648 DACH1Q9UI36 760 aa12.39□□□□□ -0.43
EBF3-202ENST00000368648 E2F4Q16254 413 aa12.38□□□□□ -0.43
EBF3-202ENST00000368648 TFCP2L1Q9NZI6 479 aa12.38□□□□□ -0.43
EBF3-202ENST00000368648 ABCC3O15438 1527 aa12.38□□□□□ -0.43
EBF3-202ENST00000368648 PIK3C2GO75747 1445 aa12.38□□□□□ -0.43
EBF3-202ENST00000368648 XBP1P17861 261 aa12.38□□□□□ -0.43
EBF3-202ENST00000368648 ZFYVE27Q5T4F4 411 aa12.38□□□□□ -0.43
EBF3-202ENST00000368648 RASEFQ8IZ41 740 aa12.38□□□□□ -0.43
EBF3-202ENST00000368648 GUCA1BQ9UMX6 200 aa12.38□□□□□ -0.43
EBF3-202ENST00000368648 N4BP3O15049 544 aa12.38□□□□□ -0.43
EBF3-202ENST00000368648 CWF19L2Q2TBE0 894 aaKnown RBP12.38□□□□□ -0.43
EBF3-202ENST00000368648 KLF18A0A0U1RQI7 1052 aa12.37□□□□□ -0.43
EBF3-202ENST00000368648 CTAGE15A4D2H0 777 aa12.37□□□□□ -0.43
EBF3-202ENST00000368648 CTAGE8P0CG41 777 aa12.37□□□□□ -0.43
EBF3-202ENST00000368648 IMMTQ16891 758 aaKnown RBP12.37□□□□□ -0.43
EBF3-202ENST00000368648 CAVIN4Q5BKX8 364 aa12.37□□□□□ -0.43
EBF3-202ENST00000368648 UTP14CQ5TAP6 766 aaKnown RBP12.37□□□□□ -0.43
EBF3-202ENST00000368648 CTAGE6Q86UF2 777 aa12.37□□□□□ -0.43
EBF3-202ENST00000368648 CTAGE4Q8IX94 777 aa12.37□□□□□ -0.43
EBF3-202ENST00000368648 DCAF5Q96JK2 942 aa12.37□□□□□ -0.43
EBF3-202ENST00000368648 PIK3R4Q99570 1358 aa12.37□□□□□ -0.43
EBF3-202ENST00000368648 SMC1AQ14683 1233 aaKnown RBP12.37□□□□□ -0.43
EBF3-202ENST00000368648 ME3Q16798 604 aa12.37□□□□□ -0.43
EBF3-202ENST00000368648 CCDC102BQ68D86 513 aa12.37□□□□□ -0.43
EBF3-202ENST00000368648 GOLGA1Q92805 767 aa12.37□□□□□ -0.43
EBF3-202ENST00000368648 DESI2Q9BSY9 194 aa12.37□□□□□ -0.43
EBF3-202ENST00000368648 LGR6Q9HBX8 967 aa12.37□□□□□ -0.43
EBF3-202ENST00000368648 IQSEC3Q9UPP2 1182 aaPredicted RBP12.37□□□□□ -0.43
EBF3-202ENST00000368648 NIP7Q9Y221 180 aaKnown RBP eCLIP12.37□□□□□ -0.43
EBF3-202ENST00000368648 WDHD1O75717 1129 aaPredicted RBP12.37□□□□□ -0.43
EBF3-202ENST00000368648 FAM160A1Q05DH4 1040 aa12.37□□□□□ -0.43
EBF3-202ENST00000368648 XPO4Q9C0E2 1151 aaKnown RBP12.37□□□□□ -0.43
EBF3-202ENST00000368648 BRMS1Q9HCU9 246 aa12.37□□□□□ -0.43
EBF3-202ENST00000368648 RTL1A6NKG5 1358 aa12.37□□□□□ -0.43
EBF3-202ENST00000368648 PRDM15P57071 1507 aaPredicted RBP12.37□□□□□ -0.43
EBF3-202ENST00000368648 HNRNPH2P55795 449 aaKnown RBP12.37□□□□□ -0.43
EBF3-202ENST00000368648 NCBP1Q09161 790 aaKnown RBP12.37□□□□□ -0.43
EBF3-202ENST00000368648 AIDAQ96BJ3 306 aa12.37□□□□□ -0.43
EBF3-202ENST00000368648 EIF2AK4Q9P2K8 1649 aaKnown RBP12.36□□□□□ -0.43
EBF3-202ENST00000368648 EFCAB6Q5THR3 1501 aa12.36□□□□□ -0.43
EBF3-202ENST00000368648 PLEKHG3A1L390 1219 aa12.36□□□□□ -0.43
EBF3-202ENST00000368648 ZSCAN20P17040 1043 aaPredicted RBP12.36□□□□□ -0.43
EBF3-202ENST00000368648 RUFY3Q7L099 469 aa12.36□□□□□ -0.43
EBF3-202ENST00000368648 PTPDC1A2A3K4 754 aa12.36□□□□□ -0.43
EBF3-202ENST00000368648 FBXO38Q6PIJ6 1188 aa12.36□□□□□ -0.43
EBF3-202ENST00000368648 EPC1Q9H2F5 836 aa12.36□□□□□ -0.43
EBF3-202ENST00000368648 ZDHHC9Q9Y397 364 aa12.36□□□□□ -0.43
EBF3-202ENST00000368648 MINDY4BA8MYZ0 360 aa12.36□□□□□ -0.43
EBF3-202ENST00000368648 FTOQ9C0B1 505 aaKnown RBP eCLIP12.36□□□□□ -0.43
EBF3-202ENST00000368648 ZSCAN16Q9H4T2 348 aaPredicted RBP12.36□□□□□ -0.43
EBF3-202ENST00000368648 USP21Q9UK80 565 aa12.36□□□□□ -0.43
EBF3-202ENST00000368648 SPTLC2O15270 562 aa12.35□□□□□ -0.43
EBF3-202ENST00000368648 CAVIN2O95810 425 aa12.35□□□□□ -0.43
EBF3-202ENST00000368648 MAATS1Q7Z4T9 603 aa12.35□□□□□ -0.43
EBF3-202ENST00000368648 CERKQ8TCT0 537 aa12.35□□□□□ -0.43
EBF3-202ENST00000368648 SETDB2Q96T68 719 aa12.35□□□□□ -0.43
EBF3-202ENST00000368648 AKAP2Q9Y2D5 859 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms