RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 ISCA1Q9BUE6 129 aa21.42■■□□□ 1.02
APP-203ENST00000354192 BCL11BQ9C0K0 894 aaPredicted RBP21.42■■□□□ 1.02
APP-203ENST00000354192 AKAP2Q9Y2D5 859 aa21.42■■□□□ 1.02
APP-203ENST00000354192 ADCY5O95622 1261 aa21.41■■□□□ 1.02
APP-203ENST00000354192 GTF2E1P29083 439 aaPredicted RBP21.41■■□□□ 1.02
APP-203ENST00000354192 PHKA1P46020 1223 aa21.41■■□□□ 1.02
APP-203ENST00000354192 GIGYF2Q6Y7W6 1299 aaKnown RBP21.41■■□□□ 1.02
APP-203ENST00000354192 TNMDQ9H2S6 317 aa21.41■■□□□ 1.02
APP-203ENST00000354192 FGAP02671 866 aa21.41■■□□□ 1.02
APP-203ENST00000354192 ZMYM1Q5SVZ6 1142 aa21.41■■□□□ 1.02
APP-203ENST00000354192 DRC7Q8IY82 874 aa21.41■■□□□ 1.02
APP-203ENST00000354192 NUP62CLQ9H1M0 184 aa21.41■■□□□ 1.02
APP-203ENST00000354192 TTLL11Q8NHH1 800 aa21.4■■□□□ 1.02
APP-203ENST00000354192 MAP3K15Q6ZN16 1313 aa21.4■■□□□ 1.02
APP-203ENST00000354192 KIF1AQ12756 1690 aa21.4■■□□□ 1.02
APP-203ENST00000354192 USP54Q70EL1 1684 aa21.4■■□□□ 1.02
APP-203ENST00000354192 GPAA1O43292 621 aa21.4■■□□□ 1.02
APP-203ENST00000354192 MCAMP43121 646 aa21.39■■□□□ 1.02
APP-203ENST00000354192 IMMTQ16891 758 aaKnown RBP21.39■■□□□ 1.02
APP-203ENST00000354192 KLF18A0A0U1RQI7 1052 aa21.39■■□□□ 1.01
APP-203ENST00000354192 ALS2Q96Q42 1657 aa21.39■■□□□ 1.01
APP-203ENST00000354192 GOLGA8BA8MQT2 603 aa21.38■■□□□ 1.01
APP-203ENST00000354192 NPHP1O15259 732 aa21.38■■□□□ 1.01
APP-203ENST00000354192 PCCAP05165 728 aaPredicted RBP21.38■■□□□ 1.01
APP-203ENST00000354192 DDB1Q16531 1140 aa21.38■■□□□ 1.01
APP-203ENST00000354192 MYL10Q9BUA6 226 aa21.38■■□□□ 1.01
APP-203ENST00000354192 ABCF2Q9UG63 623 aa21.38■■□□□ 1.01
APP-203ENST00000354192 ME1P48163 572 aa21.38■■□□□ 1.01
APP-203ENST00000354192 LUZP1Q86V48 1076 aa21.38■■□□□ 1.01
APP-203ENST00000354192 HELLSQ9NRZ9 838 aa21.38■■□□□ 1.01
APP-203ENST00000354192 ZNF213O14771 459 aa21.38■■□□□ 1.01
APP-203ENST00000354192 CTSWP56202 376 aa21.38■■□□□ 1.01
APP-203ENST00000354192 NKX1-1Q15270 411 aaPredicted RBP21.38■■□□□ 1.01
APP-203ENST00000354192 KCNB2Q92953 911 aa21.38■■□□□ 1.01
APP-203ENST00000354192 NR1I2O75469 434 aa21.37■■□□□ 1.01
APP-203ENST00000354192 LEO1Q8WVC0 666 aaPredicted RBP21.37■■□□□ 1.01
APP-203ENST00000354192 SCN11AQ9UI33 1791 aa21.37■■□□□ 1.01
APP-203ENST00000354192 KCNQ2O43526 872 aa21.37■■□□□ 1.01
APP-203ENST00000354192 PRC1O43663 620 aa21.37■■□□□ 1.01
APP-203ENST00000354192 CYP19A1P11511 503 aaPredicted RBP21.37■■□□□ 1.01
APP-203ENST00000354192 DCCP43146 1447 aa21.37■■□□□ 1.01
APP-203ENST00000354192 SF3A1Q15459 793 aaKnown RBP21.37■■□□□ 1.01
APP-203ENST00000354192 NFXL1Q6ZNB6 911 aa21.37■■□□□ 1.01
APP-203ENST00000354192 MIGA1Q8NAN2 632 aa21.37■■□□□ 1.01
APP-203ENST00000354192 TEX13AQ9BXU3 409 aaPredicted RBP21.37■■□□□ 1.01
APP-203ENST00000354192 TRDNQ13061 729 aa21.36■■□□□ 1.01
APP-203ENST00000354192 SLC4A8Q2Y0W8 1093 aa21.36■■□□□ 1.01
APP-203ENST00000354192 MICU3Q86XE3 530 aa21.36■■□□□ 1.01
APP-203ENST00000354192 NIP7Q9Y221 180 aaKnown RBP eCLIP21.36■■□□□ 1.01
APP-203ENST00000354192 MAP3K11Q16584 847 aa21.36■■□□□ 1.01
APP-203ENST00000354192 JAG2Q9Y219 1238 aa21.36■■□□□ 1.01
APP-203ENST00000354192 GNL2Q13823 731 aaKnown RBP21.35■■□□□ 1.01
APP-203ENST00000354192 USPL1Q5W0Q7 1092 aa21.35■■□□□ 1.01
APP-203ENST00000354192 IL17RAQ96F46 866 aa21.35■■□□□ 1.01
APP-203ENST00000354192 ZKSCAN3Q9BRR0 538 aa21.35■■□□□ 1.01
APP-203ENST00000354192 WWC3Q9ULE0 1092 aa21.35■■□□□ 1.01
APP-203ENST00000354192 WTIPA6NIX2 430 aaPredicted RBP21.35■■□□□ 1.01
APP-203ENST00000354192 AIDAQ96BJ3 306 aa21.35■■□□□ 1.01
APP-203ENST00000354192 CCDC192P0DO97 292 aa21.34■■□□□ 1.01
APP-203ENST00000354192 NSUN7Q8NE18 718 aaKnown RBP21.34■■□□□ 1.01
APP-203ENST00000354192 SCAND2PQ9GZW5 306 aaPredicted RBP21.34■■□□□ 1.01
APP-203ENST00000354192 PIH1D3Q9NQM4 214 aaKnown RBP21.34■■□□□ 1.01
APP-203ENST00000354192 AFDNP55196 1824 aaKnown RBP21.34■■□□□ 1.01
APP-203ENST00000354192 ATP2B1P20020 1258 aa21.34■■□□□ 1.01
APP-203ENST00000354192 CCDC102BQ68D86 513 aa21.34■■□□□ 1.01
APP-203ENST00000354192 CCDC39Q9UFE4 941 aa21.34■■□□□ 1.01
APP-203ENST00000354192 B4E1Z4 1266 aa21.33■■□□□ 1.01
APP-203ENST00000354192 PDIA3P30101 505 aaKnown RBP21.33■■□□□ 1.01
APP-203ENST00000354192 RBM10P98175 930 aaKnown RBP21.33■■□□□ 1.01
APP-203ENST00000354192 SUSD4Q5VX71 490 aa21.33■■□□□ 1.01
APP-203ENST00000354192 AIFM3Q96NN9 605 aa21.33■■□□□ 1.01
APP-203ENST00000354192 SH3TC1Q8TE82 1336 aa21.33■■□□□ 1.01
APP-203ENST00000354192 ZNF532Q9HCE3 1301 aa21.33■■□□□ 1.01
APP-203ENST00000354192 ANO6Q4KMQ2 910 aa21.33■■□□□ 1
APP-203ENST00000354192 MAGEB6Q8N7X4 407 aa21.33■■□□□ 1
APP-203ENST00000354192 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.33■■□□□ 1
APP-203ENST00000354192 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.33■■□□□ 1
APP-203ENST00000354192 ISM2Q6H9L7 571 aa21.32■■□□□ 1
APP-203ENST00000354192 DSCC1Q9BVC3 393 aa21.32■■□□□ 1
APP-203ENST00000354192 DNAJC25Q9H1X3 360 aa21.32■■□□□ 1
APP-203ENST00000354192 BCAMP50895 628 aa21.32■■□□□ 1
APP-203ENST00000354192 LRRFIP1Q32MZ4 808 aaKnown RBP21.32■■□□□ 1
APP-203ENST00000354192 SASS6Q6UVJ0 657 aa21.32■■□□□ 1
APP-203ENST00000354192 PGBD1Q96JS3 809 aa21.32■■□□□ 1
APP-203ENST00000354192 UBN2Q6ZU65 1347 aa21.32■■□□□ 1
APP-203ENST00000354192 PHRF1Q9P1Y6 1649 aaKnown RBP21.32■■□□□ 1
APP-203ENST00000354192 CTDNEP1O95476 244 aa21.32■■□□□ 1
APP-203ENST00000354192 USP28Q96RU2 1077 aa21.32■■□□□ 1
APP-203ENST00000354192 ORC3Q9UBD5 711 aaPredicted RBP21.32■■□□□ 1
APP-203ENST00000354192 TUBGCP6Q96RT7 1819 aa21.31■■□□□ 1
APP-203ENST00000354192 HMGB1P09429 215 aaKnown RBP21.31■■□□□ 1
APP-203ENST00000354192 CTDSPL2Q05D32 466 aa21.31■■□□□ 1
APP-203ENST00000354192 APPBP2Q92624 585 aa21.31■■□□□ 1
APP-203ENST00000354192 ARMT1Q9H993 441 aa21.31■■□□□ 1
APP-203ENST00000354192 CIAO1O76071 339 aa21.31■■□□□ 1
APP-203ENST00000354192 ADD1P35611 737 aaKnown RBP21.31■■□□□ 1
APP-203ENST00000354192 CRKLP46109 303 aaKnown RBP21.31■■□□□ 1
APP-203ENST00000354192 FAM98CQ17RN3 349 aaKnown RBP21.31■■□□□ 1
APP-203ENST00000354192 PHKBQ93100 1093 aa21.31■■□□□ 1
APP-203ENST00000354192 CTNNA3Q9UI47 895 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms