RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 RABL6Q3YEC7 729 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC6B-202ENST00000347691 FBXL16Q8N461 479 aa11.79□□□□□ -0.52
TRAPPC6B-202ENST00000347691 AOPEPQ8N6M6 819 aa11.79□□□□□ -0.52
TRAPPC6B-202ENST00000347691 USP28Q96RU2 1077 aa11.79□□□□□ -0.52
TRAPPC6B-202ENST00000347691 DNAJC2Q99543 621 aaKnown RBP11.79□□□□□ -0.52
TRAPPC6B-202ENST00000347691 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC6B-202ENST00000347691 SALL1Q9NSC2 1324 aa11.79□□□□□ -0.52
TRAPPC6B-202ENST00000347691 TFCP2Q12800 502 aa11.79□□□□□ -0.52
TRAPPC6B-202ENST00000347691 COL9A3Q14050 684 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC6B-202ENST00000347691 MYD88Q99836 296 aa11.79□□□□□ -0.52
TRAPPC6B-202ENST00000347691 GOLPH3LQ9H4A5 285 aa11.79□□□□□ -0.52
TRAPPC6B-202ENST00000347691 ZNF215Q9UL58 517 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC6B-202ENST00000347691 SPEF2Q9C093 1822 aa11.79□□□□□ -0.52
TRAPPC6B-202ENST00000347691 YEATS4O95619 227 aa11.79□□□□□ -0.52
TRAPPC6B-202ENST00000347691 EXOSC10Q01780 885 aaKnown RBP11.79□□□□□ -0.52
TRAPPC6B-202ENST00000347691 LRRC59Q96AG4 307 aaKnown RBP11.79□□□□□ -0.52
TRAPPC6B-202ENST00000347691 GPR108Q9NPR9 543 aa11.79□□□□□ -0.52
TRAPPC6B-202ENST00000347691 USP16Q9Y5T5 823 aa11.79□□□□□ -0.52
TRAPPC6B-202ENST00000347691 SFPQP23246 707 aaKnown RBP eCLIP11.78□□□□□ -0.52
TRAPPC6B-202ENST00000347691 RFX5P48382 616 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC6B-202ENST00000347691 PTPN12Q05209 780 aaKnown RBP11.78□□□□□ -0.52
TRAPPC6B-202ENST00000347691 SF3A1Q15459 793 aaKnown RBP11.78□□□□□ -0.52
TRAPPC6B-202ENST00000347691 BRAPQ7Z569 592 aa11.78□□□□□ -0.52
TRAPPC6B-202ENST00000347691 ARHGEF25Q86VW2 580 aa11.78□□□□□ -0.52
TRAPPC6B-202ENST00000347691 AFDNP55196 1824 aaKnown RBP11.78□□□□□ -0.52
TRAPPC6B-202ENST00000347691 ZNF790Q6PG37 636 aa11.78□□□□□ -0.52
TRAPPC6B-202ENST00000347691 ANKRD13DQ6ZTN6 518 aa11.78□□□□□ -0.52
TRAPPC6B-202ENST00000347691 FMR1NBQ8N0W7 255 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC6B-202ENST00000347691 ANKRD24Q8TF21 1146 aa11.78□□□□□ -0.52
TRAPPC6B-202ENST00000347691 XAGE3Q8WTP9 111 aa11.78□□□□□ -0.52
TRAPPC6B-202ENST00000347691 PLEKHG2Q9H7P9 1386 aa11.78□□□□□ -0.52
TRAPPC6B-202ENST00000347691 ABCC6O95255 1503 aa11.77□□□□□ -0.52
TRAPPC6B-202ENST00000347691 MYO1BO43795 1136 aa11.77□□□□□ -0.52
TRAPPC6B-202ENST00000347691 BMS1Q14692 1282 aaKnown RBP11.77□□□□□ -0.52
TRAPPC6B-202ENST00000347691 L2HGDHQ9H9P8 463 aa11.77□□□□□ -0.52
TRAPPC6B-202ENST00000347691 KIAA1468Q9P260 1216 aa11.77□□□□□ -0.52
TRAPPC6B-202ENST00000347691 APOBRQ0VD83 1088 aa11.77□□□□□ -0.53
TRAPPC6B-202ENST00000347691 STK38Q15208 465 aa11.77□□□□□ -0.53
TRAPPC6B-202ENST00000347691 KLHDC4Q8TBB5 520 aa11.77□□□□□ -0.53
TRAPPC6B-202ENST00000347691 EDC3Q96F86 508 aaKnown RBP11.77□□□□□ -0.53
TRAPPC6B-202ENST00000347691 SRRTQ9BXP5 876 aaKnown RBP11.77□□□□□ -0.53
TRAPPC6B-202ENST00000347691 CARMIL3Q8ND23 1372 aa11.77□□□□□ -0.53
TRAPPC6B-202ENST00000347691 USP27XA6NNY8 438 aa11.77□□□□□ -0.53
TRAPPC6B-202ENST00000347691 CBFA2T2O43439 604 aa11.77□□□□□ -0.53
TRAPPC6B-202ENST00000347691 CTDNEP1O95476 244 aa11.77□□□□□ -0.53
TRAPPC6B-202ENST00000347691 KMT5BQ4FZB7 885 aa11.77□□□□□ -0.53
TRAPPC6B-202ENST00000347691 POLR3EQ9NVU0 708 aa11.77□□□□□ -0.53
TRAPPC6B-202ENST00000347691 ARGLU1Q9NWB6 273 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC6B-202ENST00000347691 FAM53CQ9NYF3 392 aa11.77□□□□□ -0.53
TRAPPC6B-202ENST00000347691 SCN11AQ9UI33 1791 aa11.76□□□□□ -0.53
TRAPPC6B-202ENST00000347691 ZMYM1Q5SVZ6 1142 aa11.76□□□□□ -0.53
TRAPPC6B-202ENST00000347691 CCDC129Q6ZRS4 1044 aa11.76□□□□□ -0.53
TRAPPC6B-202ENST00000347691 COPS6Q7L5N1 327 aa11.76□□□□□ -0.53
TRAPPC6B-202ENST00000347691 DBNDD2Q9BQY9 259 aa11.76□□□□□ -0.53
TRAPPC6B-202ENST00000347691 PAG1Q9NWQ8 432 aa11.76□□□□□ -0.53
TRAPPC6B-202ENST00000347691 PCDHA7Q9UN72 937 aa11.76□□□□□ -0.53
TRAPPC6B-202ENST00000347691 PRAMEF22A3QJZ6 481 aa11.76□□□□□ -0.53
TRAPPC6B-202ENST00000347691 TPM1P09493 284 aa11.76□□□□□ -0.53
TRAPPC6B-202ENST00000347691 CEBPAP49715 358 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC6B-202ENST00000347691 EVCP57679 992 aa11.76□□□□□ -0.53
TRAPPC6B-202ENST00000347691 NLRP12P59046 1061 aa11.76□□□□□ -0.53
TRAPPC6B-202ENST00000347691 TERF2Q15554 542 aa11.76□□□□□ -0.53
TRAPPC6B-202ENST00000347691 EPHA10Q5JZY3 1008 aa11.76□□□□□ -0.53
TRAPPC6B-202ENST00000347691 STOX1Q6ZVD7 989 aa11.76□□□□□ -0.53
TRAPPC6B-202ENST00000347691 TRMT1Q9NXH9 659 aaKnown RBP11.76□□□□□ -0.53
TRAPPC6B-202ENST00000347691 C5P01031 1676 aa11.76□□□□□ -0.53
TRAPPC6B-202ENST00000347691 FER1L4A9Z1Z3 1794 aa11.75□□□□□ -0.53
TRAPPC6B-202ENST00000347691 E7EWF7 191 aa11.75□□□□□ -0.53
TRAPPC6B-202ENST00000347691 IKBKBO14920 756 aa11.75□□□□□ -0.53
TRAPPC6B-202ENST00000347691 SMC2O95347 1197 aa11.75□□□□□ -0.53
TRAPPC6B-202ENST00000347691 GCP02774 474 aa11.75□□□□□ -0.53
TRAPPC6B-202ENST00000347691 SLFN14P0C7P3 912 aa11.75□□□□□ -0.53
TRAPPC6B-202ENST00000347691 PDIA3P30101 505 aaKnown RBP11.75□□□□□ -0.53
TRAPPC6B-202ENST00000347691 ARID5BQ14865 1188 aa11.75□□□□□ -0.53
TRAPPC6B-202ENST00000347691 SLC52A2Q9HAB3 445 aa11.75□□□□□ -0.53
TRAPPC6B-202ENST00000347691 SLC3A2P08195 630 aaKnown RBP11.75□□□□□ -0.53
TRAPPC6B-202ENST00000347691 ELF2Q15723 593 aa11.75□□□□□ -0.53
TRAPPC6B-202ENST00000347691 DDX46Q7L014 1031 aaKnown RBP11.75□□□□□ -0.53
TRAPPC6B-202ENST00000347691 LRRC2Q9BYS8 371 aa11.75□□□□□ -0.53
TRAPPC6B-202ENST00000347691 NAP1L2Q9ULW6 460 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC6B-202ENST00000347691 SNRPA1P09661 255 aaKnown RBP11.75□□□□□ -0.53
TRAPPC6B-202ENST00000347691 MYL6BP14649 208 aa11.75□□□□□ -0.53
TRAPPC6B-202ENST00000347691 CCT2P78371 535 aaKnown RBP11.75□□□□□ -0.53
TRAPPC6B-202ENST00000347691 FBXO38Q6PIJ6 1188 aa11.75□□□□□ -0.53
TRAPPC6B-202ENST00000347691 SYNE3Q6ZMZ3 975 aa11.75□□□□□ -0.53
TRAPPC6B-202ENST00000347691 LINC00301Q8NCQ3 95 aa11.75□□□□□ -0.53
TRAPPC6B-202ENST00000347691 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.75□□□□□ -0.53
TRAPPC6B-202ENST00000347691 TIGD1Q96MW7 591 aa11.75□□□□□ -0.53
TRAPPC6B-202ENST00000347691 SEC62Q99442 399 aaKnown RBP11.75□□□□□ -0.53
TRAPPC6B-202ENST00000347691 PHLPP2Q6ZVD8 1323 aa11.74□□□□□ -0.53
TRAPPC6B-202ENST00000347691 SPTLC2O15270 562 aa11.74□□□□□ -0.53
TRAPPC6B-202ENST00000347691 NAA30Q147X3 362 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC6B-202ENST00000347691 TMC6Q7Z403 805 aa11.74□□□□□ -0.53
TRAPPC6B-202ENST00000347691 C8orf76Q96K31 380 aa11.74□□□□□ -0.53
TRAPPC6B-202ENST00000347691 PPP1R13BQ96KQ4 1090 aa11.74□□□□□ -0.53
TRAPPC6B-202ENST00000347691 IL15P40933 162 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC6B-202ENST00000347691 ESCO1Q5FWF5 840 aa11.74□□□□□ -0.53
TRAPPC6B-202ENST00000347691 UBE3BQ7Z3V4 1068 aa11.74□□□□□ -0.53
TRAPPC6B-202ENST00000347691 NBPF11Q86T75 865 aa11.74□□□□□ -0.53
TRAPPC6B-202ENST00000347691 FCHSD1Q86WN1 690 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms