RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 KLHDC4Q8TBB5 520 aa16.29■□□□□ 0.2
HLA-DQA1-201ENST00000343139 TAF1DQ9H5J8 278 aaPredicted RBP16.29■□□□□ 0.2
HLA-DQA1-201ENST00000343139 GJA3Q9Y6H8 435 aa16.29■□□□□ 0.2
HLA-DQA1-201ENST00000343139 LMOD1P29536 600 aaPredicted RBP16.28■□□□□ 0.2
HLA-DQA1-201ENST00000343139 IL15P40933 162 aaPredicted RBP16.28■□□□□ 0.2
HLA-DQA1-201ENST00000343139 C1QTNF8P60827 252 aa16.28■□□□□ 0.2
HLA-DQA1-201ENST00000343139 TXNRD3Q86VQ6 643 aa16.28■□□□□ 0.2
HLA-DQA1-201ENST00000343139 GPRC5DQ9NZD1 345 aa16.28■□□□□ 0.2
HLA-DQA1-201ENST00000343139 PSMD14O00487 310 aa16.27■□□□□ 0.2
HLA-DQA1-201ENST00000343139 PLIN1O60240 522 aa16.27■□□□□ 0.2
HLA-DQA1-201ENST00000343139 ATP8B2P98198 1209 aa16.27■□□□□ 0.2
HLA-DQA1-201ENST00000343139 FSTL1Q12841 308 aa16.27■□□□□ 0.2
HLA-DQA1-201ENST00000343139 ZNF804AQ7Z570 1209 aa16.27■□□□□ 0.2
HLA-DQA1-201ENST00000343139 SCN4AP35499 1836 aa16.27■□□□□ 0.19
HLA-DQA1-201ENST00000343139 SPEF2Q9C093 1822 aa16.27■□□□□ 0.19
HLA-DQA1-201ENST00000343139 USP17L3A6NCW0 530 aa16.26■□□□□ 0.19
HLA-DQA1-201ENST00000343139 USP17L4A6NCW7 530 aa16.26■□□□□ 0.19
HLA-DQA1-201ENST00000343139 IL1R1P14778 569 aa16.26■□□□□ 0.19
HLA-DQA1-201ENST00000343139 FGFR2P21802 821 aa16.26■□□□□ 0.19
HLA-DQA1-201ENST00000343139 KLRK1P26718 216 aa16.26■□□□□ 0.19
HLA-DQA1-201ENST00000343139 EPHX2P34913 555 aa16.26■□□□□ 0.19
HLA-DQA1-201ENST00000343139 MMP14P50281 582 aa16.26■□□□□ 0.19
HLA-DQA1-201ENST00000343139 POLA2Q14181 598 aa16.26■□□□□ 0.19
HLA-DQA1-201ENST00000343139 PUM3Q15397 648 aaKnown RBP16.26■□□□□ 0.19
HLA-DQA1-201ENST00000343139 STRIP1Q5VSL9 837 aa16.26■□□□□ 0.19
HLA-DQA1-201ENST00000343139 USP17L1Q7RTZ2 530 aa16.26■□□□□ 0.19
HLA-DQA1-201ENST00000343139 AGBL3Q8NEM8 1001 aa16.26■□□□□ 0.19
HLA-DQA1-201ENST00000343139 SSH3Q8TE77 659 aa16.26■□□□□ 0.19
HLA-DQA1-201ENST00000343139 CD209Q9NNX6 404 aa16.26■□□□□ 0.19
HLA-DQA1-201ENST00000343139 SNAP23O00161 211 aa16.26■□□□□ 0.19
HLA-DQA1-201ENST00000343139 GMPSP49915 693 aaPredicted RBP16.26■□□□□ 0.19
HLA-DQA1-201ENST00000343139 USP50Q70EL3 339 aaPredicted RBP16.26■□□□□ 0.19
HLA-DQA1-201ENST00000343139 SMC1BQ8NDV3 1235 aa16.26■□□□□ 0.19
HLA-DQA1-201ENST00000343139 KCNQ5Q9NR82 932 aa16.26■□□□□ 0.19
HLA-DQA1-201ENST00000343139 ZBTB40Q9NUA8 1239 aa16.26■□□□□ 0.19
HLA-DQA1-201ENST00000343139 MYO3BQ8WXR4 1341 aa16.25■□□□□ 0.19
HLA-DQA1-201ENST00000343139 PNMA6EA0A0J9YXQ4 647 aa16.25■□□□□ 0.19
HLA-DQA1-201ENST00000343139 ZBTB22O15209 634 aa16.25■□□□□ 0.19
HLA-DQA1-201ENST00000343139 RSBN1LQ6PCB5 846 aaPredicted RBP16.25■□□□□ 0.19
HLA-DQA1-201ENST00000343139 LDHDQ86WU2 507 aa16.25■□□□□ 0.19
HLA-DQA1-201ENST00000343139 LPIN2Q92539 896 aa16.25■□□□□ 0.19
HLA-DQA1-201ENST00000343139 ADARB2Q9NS39 739 aaKnown RBP16.25■□□□□ 0.19
HLA-DQA1-201ENST00000343139 CEP126Q9P2H0 1117 aa16.25■□□□□ 0.19
HLA-DQA1-201ENST00000343139 COG6Q9Y2V7 657 aa16.25■□□□□ 0.19
HLA-DQA1-201ENST00000343139 EPS15P42566 896 aa16.24■□□□□ 0.19
HLA-DQA1-201ENST00000343139 FAM84BQ96KN1 310 aaPredicted RBP16.24■□□□□ 0.19
HLA-DQA1-201ENST00000343139 GMLQ99445 158 aa16.24■□□□□ 0.19
HLA-DQA1-201ENST00000343139 PA2G4Q9UQ80 394 aaKnown RBP16.24■□□□□ 0.19
HLA-DQA1-201ENST00000343139 IFIT1P09914 478 aaKnown RBP16.23■□□□□ 0.19
HLA-DQA1-201ENST00000343139 HIBADHP31937 336 aaKnown RBP16.23■□□□□ 0.19
HLA-DQA1-201ENST00000343139 FKBP1AP62942 108 aaKnown RBP16.23■□□□□ 0.19
HLA-DQA1-201ENST00000343139 CAVIN4Q5BKX8 364 aa16.23■□□□□ 0.19
HLA-DQA1-201ENST00000343139 DACT2Q5SW24 774 aa16.23■□□□□ 0.19
HLA-DQA1-201ENST00000343139 FBXO33Q7Z6M2 555 aa16.23■□□□□ 0.19
HLA-DQA1-201ENST00000343139 RPAP2Q8IXW5 612 aaPredicted RBP16.23■□□□□ 0.19
HLA-DQA1-201ENST00000343139 SIL1Q9H173 461 aa16.23■□□□□ 0.19
HLA-DQA1-201ENST00000343139 CNOT7Q9UIV1 285 aaKnown RBP16.23■□□□□ 0.19
HLA-DQA1-201ENST00000343139 A0A1B0GUL6 1792 aa16.23■□□□□ 0.19
HLA-DQA1-201ENST00000343139 H7C1D1 291 aa16.22■□□□□ 0.19
HLA-DQA1-201ENST00000343139 SASH1O94885 1247 aa16.22■□□□□ 0.19
HLA-DQA1-201ENST00000343139 RRP1P56182 461 aaKnown RBP16.22■□□□□ 0.19
HLA-DQA1-201ENST00000343139 C20orf194Q5TEA3 1177 aa16.22■□□□□ 0.19
HLA-DQA1-201ENST00000343139 CEP85Q6P2H3 762 aa16.22■□□□□ 0.19
HLA-DQA1-201ENST00000343139 TDRD7Q8NHU6 1098 aaKnown RBP16.22■□□□□ 0.19
HLA-DQA1-201ENST00000343139 NOP58Q9Y2X3 529 aaKnown RBP16.22■□□□□ 0.19
HLA-DQA1-201ENST00000343139 ZBTB12Q9Y330 459 aaPredicted RBP16.22■□□□□ 0.19
HLA-DQA1-201ENST00000343139 SLC5A1P13866 664 aa16.21■□□□□ 0.19
HLA-DQA1-201ENST00000343139 ZNF280AP59817 542 aaPredicted RBP16.21■□□□□ 0.19
HLA-DQA1-201ENST00000343139 TTLL5Q6EMB2 1281 aa16.21■□□□□ 0.19
HLA-DQA1-201ENST00000343139 CHADLQ6NUI6 762 aa16.21■□□□□ 0.19
HLA-DQA1-201ENST00000343139 MICALL2Q8IY33 904 aa16.21■□□□□ 0.19
HLA-DQA1-201ENST00000343139 ZC3H15Q8WU90 426 aaKnown RBP16.21■□□□□ 0.19
HLA-DQA1-201ENST00000343139 FAM205AQ6ZU69 1335 aa16.21■□□□□ 0.19
HLA-DQA1-201ENST00000343139 G3BP1Q13283 466 aaKnown RBP eCLIP16.21■□□□□ 0.18
HLA-DQA1-201ENST00000343139 C1orf115Q9H7X2 142 aa16.21■□□□□ 0.18
HLA-DQA1-201ENST00000343139 PGAP2Q9UHJ9 254 aa16.21■□□□□ 0.18
HLA-DQA1-201ENST00000343139 AKAP2Q9Y2D5 859 aa16.21■□□□□ 0.18
HLA-DQA1-201ENST00000343139 GYG1P46976 350 aa16.2■□□□□ 0.18
HLA-DQA1-201ENST00000343139 ATP2B3Q16720 1220 aa16.2■□□□□ 0.18
HLA-DQA1-201ENST00000343139 VPS37DQ86XT2 251 aa16.2■□□□□ 0.18
HLA-DQA1-201ENST00000343139 SCN9AQ15858 1988 aa16.2■□□□□ 0.18
HLA-DQA1-201ENST00000343139 USP17L8P0C7I0 530 aa16.19■□□□□ 0.18
HLA-DQA1-201ENST00000343139 GTF2IP78347 998 aa16.19■□□□□ 0.18
HLA-DQA1-201ENST00000343139 EAPPQ56P03 285 aaPredicted RBP16.19■□□□□ 0.18
HLA-DQA1-201ENST00000343139 GPR108Q9NPR9 543 aa16.19■□□□□ 0.18
HLA-DQA1-201ENST00000343139 ADAMTSL1Q8N6G6 1762 aa16.19■□□□□ 0.18
HLA-DQA1-201ENST00000343139 HMMRO75330 724 aa16.18■□□□□ 0.18
HLA-DQA1-201ENST00000343139 POTEIP0CG38 1075 aa16.18■□□□□ 0.18
HLA-DQA1-201ENST00000343139 POTEJP0CG39 1038 aa16.18■□□□□ 0.18
HLA-DQA1-201ENST00000343139 PSME4Q14997 1843 aa16.18■□□□□ 0.18
HLA-DQA1-201ENST00000343139 TFCP2Q12800 502 aa16.17■□□□□ 0.18
HLA-DQA1-201ENST00000343139 HSP90AB4PQ58FF6 505 aa16.17■□□□□ 0.18
HLA-DQA1-201ENST00000343139 OGFOD1Q8N543 542 aa16.17■□□□□ 0.18
HLA-DQA1-201ENST00000343139 SEMA3EO15041 775 aa16.17■□□□□ 0.18
HLA-DQA1-201ENST00000343139 SURF6O75683 361 aaKnown RBP16.17■□□□□ 0.18
HLA-DQA1-201ENST00000343139 HSPA6P17066 643 aa16.17■□□□□ 0.18
HLA-DQA1-201ENST00000343139 BCAMP50895 628 aa16.17■□□□□ 0.18
HLA-DQA1-201ENST00000343139 TBC1D22AQ8WUA7 517 aa16.17■□□□□ 0.18
HLA-DQA1-201ENST00000343139 HIRAP54198 1017 aaPredicted RBP16.16■□□□□ 0.18
HLA-DQA1-201ENST00000343139 ERC1Q8IUD2 1116 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms