RNA–Protein interactions for RNA: ENST00000327047.5

CLRN1-202, Transcript of clarin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN1, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-202ENST00000327047 LRRFIP2Q9Y608 721 aaKnown RBP8.61□□□□□ -1.03
CLRN1-202ENST00000327047 NPHP3Q7Z494 1330 aa8.61□□□□□ -1.03
CLRN1-202ENST00000327047 A0A087WWV3 80 aa8.61□□□□□ -1.03
CLRN1-202ENST00000327047 H2AFXP16104 143 aaPredicted RBP8.61□□□□□ -1.03
CLRN1-202ENST00000327047 FAM193AP78312 1265 aa8.61□□□□□ -1.03
CLRN1-202ENST00000327047 CCZ1BP86790 482 aa8.61□□□□□ -1.03
CLRN1-202ENST00000327047 CCZ1P86791 482 aaPredicted RBP8.61□□□□□ -1.03
CLRN1-202ENST00000327047 ATP8B2P98198 1209 aa8.61□□□□□ -1.03
CLRN1-202ENST00000327047 ARHGAP29Q52LW3 1261 aa8.61□□□□□ -1.03
CLRN1-202ENST00000327047 GORABQ5T7V8 394 aa8.61□□□□□ -1.03
CLRN1-202ENST00000327047 NBPF6Q5VWK0 638 aa8.61□□□□□ -1.03
CLRN1-202ENST00000327047 PRPF40BQ6NWY9 871 aaKnown RBP8.61□□□□□ -1.03
CLRN1-202ENST00000327047 C11orf57Q6ZUT1 292 aaPredicted RBP8.61□□□□□ -1.03
CLRN1-202ENST00000327047 NBPF4Q96M43 638 aa8.61□□□□□ -1.03
CLRN1-202ENST00000327047 DDX19AQ9NUU7 478 aaKnown RBP8.61□□□□□ -1.03
CLRN1-202ENST00000327047 A6NJR5 290 aa8.6□□□□□ -1.03
CLRN1-202ENST00000327047 UNCXA6NJT0 531 aa8.6□□□□□ -1.03
CLRN1-202ENST00000327047 CDC25BP30305 580 aa8.6□□□□□ -1.03
CLRN1-202ENST00000327047 MLLT3P42568 568 aaPredicted RBP8.6□□□□□ -1.03
CLRN1-202ENST00000327047 SNW1Q13573 536 aaKnown RBP8.6□□□□□ -1.03
CLRN1-202ENST00000327047 E2F4Q16254 413 aa8.6□□□□□ -1.03
CLRN1-202ENST00000327047 TEX35Q5T0J7 233 aa8.6□□□□□ -1.03
CLRN1-202ENST00000327047 SYT10Q6XYQ8 523 aa8.6□□□□□ -1.03
CLRN1-202ENST00000327047 KRBA2Q6ZNG9 492 aa8.6□□□□□ -1.03
CLRN1-202ENST00000327047 CREBRFQ8IUR6 639 aa8.6□□□□□ -1.03
CLRN1-202ENST00000327047 LTV1Q96GA3 475 aaPredicted RBP8.6□□□□□ -1.03
CLRN1-202ENST00000327047 TMX1Q9H3N1 280 aa8.6□□□□□ -1.03
CLRN1-202ENST00000327047 LRRC37A3O60309 1634 aa8.6□□□□□ -1.03
CLRN1-202ENST00000327047 ELP1O95163 1332 aa8.6□□□□□ -1.03
CLRN1-202ENST00000327047 GNAT3A8MTJ3 354 aa8.59□□□□□ -1.03
CLRN1-202ENST00000327047 EPB41L2O43491 1005 aaKnown RBP8.59□□□□□ -1.03
CLRN1-202ENST00000327047 NEMFO60524 1076 aa8.59□□□□□ -1.03
CLRN1-202ENST00000327047 BRD2P25440 801 aaKnown RBP8.59□□□□□ -1.03
CLRN1-202ENST00000327047 ST5P78524 1137 aa8.59□□□□□ -1.03
CLRN1-202ENST00000327047 PTH1RQ03431 593 aa8.59□□□□□ -1.03
CLRN1-202ENST00000327047 PSME1Q06323 249 aa8.59□□□□□ -1.03
CLRN1-202ENST00000327047 VPS53Q5VIR6 699 aa8.59□□□□□ -1.03
CLRN1-202ENST00000327047 RNF20Q5VTR2 975 aa8.59□□□□□ -1.03
CLRN1-202ENST00000327047 USHBP1Q8N6Y0 703 aa8.59□□□□□ -1.03
CLRN1-202ENST00000327047 LEO1Q8WVC0 666 aaPredicted RBP8.59□□□□□ -1.03
CLRN1-202ENST00000327047 RSPH14Q9UHP6 348 aa8.59□□□□□ -1.03
CLRN1-202ENST00000327047 TSPYL4Q9UJ04 414 aa8.59□□□□□ -1.03
CLRN1-202ENST00000327047 TPCN1Q9ULQ1 816 aa8.59□□□□□ -1.03
CLRN1-202ENST00000327047 CYP46A1Q9Y6A2 500 aa8.59□□□□□ -1.03
CLRN1-202ENST00000327047 BECN2A8MW95 431 aa8.59□□□□□ -1.03
CLRN1-202ENST00000327047 FLIIQ13045 1269 aa8.59□□□□□ -1.03
CLRN1-202ENST00000327047 IQCB1Q15051 598 aa8.59□□□□□ -1.03
CLRN1-202ENST00000327047 GPR162Q16538 588 aa8.59□□□□□ -1.03
CLRN1-202ENST00000327047 RBM43Q6ZSC3 357 aaKnown RBP8.59□□□□□ -1.03
CLRN1-202ENST00000327047 C10orf67Q8IYJ2 551 aa8.59□□□□□ -1.03
CLRN1-202ENST00000327047 CNTROBQ8N137 903 aa8.59□□□□□ -1.03
CLRN1-202ENST00000327047 PI4K2BQ8TCG2 481 aa8.59□□□□□ -1.03
CLRN1-202ENST00000327047 MRFAP1L1Q96HT8 127 aa8.59□□□□□ -1.03
CLRN1-202ENST00000327047 PGBD1Q96JS3 809 aa8.59□□□□□ -1.03
CLRN1-202ENST00000327047 ZSCAN31Q96LW9 406 aaPredicted RBP8.59□□□□□ -1.03
CLRN1-202ENST00000327047 SCAND2PQ9GZW5 306 aaPredicted RBP8.59□□□□□ -1.03
CLRN1-202ENST00000327047 ZCCHC17Q9NP64 241 aaKnown RBP8.59□□□□□ -1.03
CLRN1-202ENST00000327047 SH2B1Q9NRF2 756 aaPredicted RBP8.59□□□□□ -1.03
CLRN1-202ENST00000327047 SEC31AO94979 1220 aaKnown RBP8.58□□□□□ -1.04
CLRN1-202ENST00000327047 APBA3O96018 575 aa8.58□□□□□ -1.04
CLRN1-202ENST00000327047 CEBPZQ03701 1054 aaKnown RBP8.58□□□□□ -1.04
CLRN1-202ENST00000327047 COL9A3Q14050 684 aaPredicted RBP8.58□□□□□ -1.04
CLRN1-202ENST00000327047 TMCO3Q6UWJ1 677 aa8.58□□□□□ -1.04
CLRN1-202ENST00000327047 ARHGEF25Q86VW2 580 aa8.58□□□□□ -1.04
CLRN1-202ENST00000327047 NFATC2IPQ8NCF5 419 aa8.58□□□□□ -1.04
CLRN1-202ENST00000327047 SMARCE1Q969G3 411 aa8.58□□□□□ -1.04
CLRN1-202ENST00000327047 TCEANC2Q96MN5 208 aa8.58□□□□□ -1.04
CLRN1-202ENST00000327047 SGIP1Q9BQI5 828 aa8.58□□□□□ -1.04
CLRN1-202ENST00000327047 CEMIPQ8WUJ3 1361 aa8.58□□□□□ -1.04
CLRN1-202ENST00000327047 SURF6O75683 361 aaKnown RBP8.58□□□□□ -1.04
CLRN1-202ENST00000327047 GNAI3P08754 354 aa8.58□□□□□ -1.04
CLRN1-202ENST00000327047 STK3Q13188 491 aa8.58□□□□□ -1.04
CLRN1-202ENST00000327047 LARP1Q6PKG0 1096 aaKnown RBP8.58□□□□□ -1.04
CLRN1-202ENST00000327047 SRCAPQ6ZRS2 3230 aa8.58□□□□□ -1.04
CLRN1-202ENST00000327047 MTFR1LQ9H019 292 aa8.58□□□□□ -1.04
CLRN1-202ENST00000327047 RASSF4Q9H2L5 321 aa8.58□□□□□ -1.04
CLRN1-202ENST00000327047 LCMT1Q9UIC8 334 aa8.58□□□□□ -1.04
CLRN1-202ENST00000327047 NCAPD2Q15021 1401 aa8.57□□□□□ -1.04
CLRN1-202ENST00000327047 GCP02774 474 aa8.57□□□□□ -1.04
CLRN1-202ENST00000327047 TPM4P67936 248 aa8.57□□□□□ -1.04
CLRN1-202ENST00000327047 E4F1Q66K89 784 aaPredicted RBP8.57□□□□□ -1.04
CLRN1-202ENST00000327047 SARM1Q6SZW1 724 aa8.57□□□□□ -1.04
CLRN1-202ENST00000327047 TXLNBQ8N3L3 684 aa8.57□□□□□ -1.04
CLRN1-202ENST00000327047 PPP1R13BQ96KQ4 1090 aa8.57□□□□□ -1.04
CLRN1-202ENST00000327047 ZSWIM6Q9HCJ5 1215 aa8.57□□□□□ -1.04
CLRN1-202ENST00000327047 PHRF1Q9P1Y6 1649 aaKnown RBP8.57□□□□□ -1.04
CLRN1-202ENST00000327047 AOX1Q06278 1338 aa8.57□□□□□ -1.04
CLRN1-202ENST00000327047 SLIT3O75094 1523 aa8.57□□□□□ -1.04
CLRN1-202ENST00000327047 KIF2AO00139 706 aaPredicted RBP8.57□□□□□ -1.04
CLRN1-202ENST00000327047 RAB11FIP3O75154 756 aa8.57□□□□□ -1.04
CLRN1-202ENST00000327047 GYS2P54840 703 aa8.57□□□□□ -1.04
CLRN1-202ENST00000327047 TAF7Q15545 349 aaPredicted RBP8.57□□□□□ -1.04
CLRN1-202ENST00000327047 KCNH5Q8NCM2 988 aa8.57□□□□□ -1.04
CLRN1-202ENST00000327047 CCDC191Q8NCU4 936 aa8.57□□□□□ -1.04
CLRN1-202ENST00000327047 ERCC4Q92889 916 aaPredicted RBP8.57□□□□□ -1.04
CLRN1-202ENST00000327047 DDX11Q96FC9 970 aa8.57□□□□□ -1.04
CLRN1-202ENST00000327047 L2HGDHQ9H9P8 463 aa8.57□□□□□ -1.04
CLRN1-202ENST00000327047 BABAM1Q9NWV8 329 aa8.57□□□□□ -1.04
CLRN1-202ENST00000327047 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.57□□□□□ -1.04
CLRN1-202ENST00000327047 SOS1Q07889 1333 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms