RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 SOCS7O14512 581 aa4.15□□□□□ -1.75
SCAMP1-201ENST00000320280 ITPK1Q13572 414 aa4.15□□□□□ -1.75
SCAMP1-201ENST00000320280 DCTN1Q14203 1278 aa4.15□□□□□ -1.75
SCAMP1-201ENST00000320280 NEUROD2Q15784 382 aa4.15□□□□□ -1.75
SCAMP1-201ENST00000320280 SLC10A5Q5PT55 438 aa4.15□□□□□ -1.75
SCAMP1-201ENST00000320280 TMED8Q6PL24 325 aaPredicted RBP4.15□□□□□ -1.75
SCAMP1-201ENST00000320280 DNAJC10Q8IXB1 793 aa4.15□□□□□ -1.75
SCAMP1-201ENST00000320280 SMC4Q9NTJ3 1288 aa4.15□□□□□ -1.75
SCAMP1-201ENST00000320280 DICER1Q9UPY3 1922 aaKnown RBP4.15□□□□□ -1.75
SCAMP1-201ENST00000320280 ADCY9O60503 1353 aa4.15□□□□□ -1.75
SCAMP1-201ENST00000320280 CAMTA2O94983 1202 aa4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 RRP1P56182 461 aaKnown RBP4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 TCIRG1Q13488 830 aa4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 ZNF34Q8IZ26 560 aa4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 DNAAF4Q8WXU2 420 aa4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 CCDC102AQ96A19 550 aa4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 ZNF775Q96BV0 537 aaPredicted RBP4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 SLC4A9Q96Q91 983 aa4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 COL11A2P13942 1736 aaPredicted RBP4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 KCNQ2O43526 872 aa4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 RGS20O76081 388 aa4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 FMNL1O95466 1100 aaPredicted RBP4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 PCCAP05165 728 aaPredicted RBP4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 MTX1Q13505 466 aa4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 NUTM1Q86Y26 1132 aa4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 ANKLE1Q8NAG6 615 aa4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 SYTL4Q96C24 671 aaPredicted RBP4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 ACSBG1Q96GR2 724 aa4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 VPS33BQ9H267 617 aa4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 ZNF609O15014 1411 aa4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 MAST2Q6P0Q8 1798 aa4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 KLRG2A4D1S0 409 aaPredicted RBP4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 KDM4AO75164 1064 aa4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 CNGB1Q14028 1251 aaPredicted RBP4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 LINC01559Q495D7 138 aa4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 ZNF598Q86UK7 904 aaKnown RBP4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 DZIP3Q86Y13 1208 aaKnown RBP4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 DZIP1LQ8IYY4 767 aaKnown RBP4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 SSH1Q8WYL5 1049 aa4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 MTFR1LQ9H019 292 aa4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 PNPLA7Q6ZV29 1317 aa4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 ABCC12Q96J65 1359 aa4.14□□□□□ -1.75
SCAMP1-201ENST00000320280 MMP14P50281 582 aa4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 LAPTM4AQ15012 233 aa4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 MORN1Q5T089 497 aa4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 SOGA3Q5TF21 947 aa4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 NBPF10Q6P3W6 841 aaKnown RBP4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 NBPF15Q8N660 670 aa4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 TSR2Q969E8 191 aaKnown RBP4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 THUMPD2Q9BTF0 503 aaKnown RBP4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 CHPF2Q9P2E5 772 aa4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 TNRC6CQ9HCJ0 1690 aaKnown RBP4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 TM4SF1P30408 202 aa4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 RFC4P35249 363 aa4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 SLC39A6Q13433 755 aa4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 CC2D2BQ6DHV5 1058 aa4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 SRCIN1Q9C0H9 1055 aa4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 CWC25Q9NXE8 425 aaPredicted RBP4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 ZBTB1Q9Y2K1 713 aa4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 LAS1LQ9Y4W2 734 aaKnown RBP4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 FER1L6Q2WGJ9 1857 aa4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 MYH13Q9UKX3 1938 aa4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 MVPQ14764 893 aaKnown RBP4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 HSP90AB4PQ58FF6 505 aa4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 BEND3Q5T5X7 828 aa4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 RPAP2Q8IXW5 612 aaPredicted RBP4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 ZBTB38Q8NAP3 1195 aaPredicted RBP4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 LRRC4BQ9NT99 713 aa4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 USP16Q9Y5T5 823 aa4.13□□□□□ -1.75
SCAMP1-201ENST00000320280 H7C1W4 665 aa4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 KCNQ3O43525 872 aa4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 EIF5BO60841 1220 aaKnown RBP4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 ST5P78524 1137 aa4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 RABL6Q3YEC7 729 aaPredicted RBP4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 FAM160A2Q8N612 972 aaPredicted RBP4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 CD2APQ9Y5K6 639 aa4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 NEURL1BA8MQ27 555 aa4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 GPR37O15354 613 aa4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 HMMRO75330 724 aa4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 CD2BP2O95400 341 aaKnown RBP4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 POLD1P28340 1107 aa4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 GCGRP47871 477 aa4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 TGFB2P61812 414 aa4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 ARID5BQ14865 1188 aa4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 SF3B3Q15393 1217 aaKnown RBP4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 STYK1Q6J9G0 422 aa4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 RIC3Q7Z5B4 369 aa4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 FTSJ3Q8IY81 847 aaKnown RBP4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 TSPYL6Q8N831 410 aa4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 XAGE3Q8WTP9 111 aa4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 TMUB1Q9BVT8 246 aa4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 AXIN1O15169 862 aa4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 PTCD1O75127 700 aaKnown RBP4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 PDE6BP35913 854 aa4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 FKBP5Q13451 457 aaPredicted RBP4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 EZH2Q15910 746 aaKnown RBP4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 TPTE2Q6XPS3 522 aa4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 COPS6Q7L5N1 327 aa4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 UTP14AQ9BVJ6 771 aaKnown RBP4.12□□□□□ -1.75
SCAMP1-201ENST00000320280 SH3TC1Q8TE82 1336 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms