RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 IL13P35225 146 aa18.36■□□□□ 0.53
ARHGEF28-201ENST00000296794 LIG1P18858 919 aa18.36■□□□□ 0.53
ARHGEF28-201ENST00000296794 CTR9Q6PD62 1173 aa18.36■□□□□ 0.53
ARHGEF28-201ENST00000296794 ZC3H12CQ9C0D7 883 aaKnown RBP18.36■□□□□ 0.53
ARHGEF28-201ENST00000296794 UBA5Q9GZZ9 404 aa18.36■□□□□ 0.53
ARHGEF28-201ENST00000296794 ARFGAP3Q9NP61 516 aa18.36■□□□□ 0.53
ARHGEF28-201ENST00000296794 ATP10AO60312 1499 aa18.36■□□□□ 0.53
ARHGEF28-201ENST00000296794 PARP3Q9Y6F1 533 aa18.36■□□□□ 0.53
ARHGEF28-201ENST00000296794 IDEP14735 1019 aa18.35■□□□□ 0.53
ARHGEF28-201ENST00000296794 PLCD4Q9BRC7 762 aa18.35■□□□□ 0.53
ARHGEF28-201ENST00000296794 PCDH11XQ9BZA7 1347 aa18.35■□□□□ 0.53
ARHGEF28-201ENST00000296794 PCDH11YQ9BZA8 1340 aa18.35■□□□□ 0.53
ARHGEF28-201ENST00000296794 LMBRD1Q9NUN5 540 aa18.35■□□□□ 0.53
ARHGEF28-201ENST00000296794 DHX32Q7L7V1 743 aaKnown RBP18.35■□□□□ 0.53
ARHGEF28-201ENST00000296794 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.35■□□□□ 0.53
ARHGEF28-201ENST00000296794 IBSPP21815 317 aaPredicted RBP18.35■□□□□ 0.53
ARHGEF28-201ENST00000296794 RRAGBQ5VZM2 374 aa18.35■□□□□ 0.53
ARHGEF28-201ENST00000296794 KRT23Q9C075 422 aa18.35■□□□□ 0.53
ARHGEF28-201ENST00000296794 JADE2Q9NQC1 790 aa18.35■□□□□ 0.53
ARHGEF28-201ENST00000296794 MAP3K19Q56UN5 1328 aa18.34■□□□□ 0.53
ARHGEF28-201ENST00000296794 AMPD3Q01432 767 aa18.34■□□□□ 0.53
ARHGEF28-201ENST00000296794 RTN1Q16799 776 aa18.34■□□□□ 0.53
ARHGEF28-201ENST00000296794 TRIM47Q96LD4 638 aa18.34■□□□□ 0.53
ARHGEF28-201ENST00000296794 TUBB4AP04350 444 aa18.34■□□□□ 0.53
ARHGEF28-201ENST00000296794 CALML4Q96GE6 196 aa18.34■□□□□ 0.53
ARHGEF28-201ENST00000296794 KAT14Q9H8E8 782 aa18.34■□□□□ 0.53
ARHGEF28-201ENST00000296794 YTHDC2Q9H6S0 1430 aaKnown RBP18.34■□□□□ 0.53
ARHGEF28-201ENST00000296794 TRIM21P19474 475 aaKnown RBP18.34■□□□□ 0.53
ARHGEF28-201ENST00000296794 FAM114A1Q8IWE2 563 aa18.34■□□□□ 0.53
ARHGEF28-201ENST00000296794 CTAGE1Q96RT6 745 aa18.34■□□□□ 0.53
ARHGEF28-201ENST00000296794 IFNKQ9P0W0 207 aa18.34■□□□□ 0.53
ARHGEF28-201ENST00000296794 SNX14Q9Y5W7 946 aa18.34■□□□□ 0.53
ARHGEF28-201ENST00000296794 MAST1Q9Y2H9 1570 aa18.33■□□□□ 0.53
ARHGEF28-201ENST00000296794 HOXC9P31274 260 aa18.33■□□□□ 0.53
ARHGEF28-201ENST00000296794 TFCP2Q12800 502 aa18.33■□□□□ 0.53
ARHGEF28-201ENST00000296794 SLC9C2Q5TAH2 1124 aa18.33■□□□□ 0.52
ARHGEF28-201ENST00000296794 RNF216Q9NWF9 866 aaPredicted RBP18.33■□□□□ 0.52
ARHGEF28-201ENST00000296794 PODXL2Q9NZ53 605 aa18.33■□□□□ 0.52
ARHGEF28-201ENST00000296794 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.33■□□□□ 0.52
ARHGEF28-201ENST00000296794 KIF20AO95235 890 aa18.33■□□□□ 0.52
ARHGEF28-201ENST00000296794 RNF113AO15541 343 aaKnown RBP18.33■□□□□ 0.52
ARHGEF28-201ENST00000296794 SRRTQ9BXP5 876 aaKnown RBP18.33■□□□□ 0.52
ARHGEF28-201ENST00000296794 STX8Q9UNK0 236 aa18.33■□□□□ 0.52
ARHGEF28-201ENST00000296794 CHL1O00533 1208 aa18.32■□□□□ 0.52
ARHGEF28-201ENST00000296794 DESP17661 470 aa18.32■□□□□ 0.52
ARHGEF28-201ENST00000296794 IFFO1Q0D2I5 559 aa18.32■□□□□ 0.52
ARHGEF28-201ENST00000296794 ORAI2Q96SN7 254 aa18.32■□□□□ 0.52
ARHGEF28-201ENST00000296794 CNNM2Q9H8M5 875 aa18.32■□□□□ 0.52
ARHGEF28-201ENST00000296794 RMND1Q9NWS8 449 aa18.32■□□□□ 0.52
ARHGEF28-201ENST00000296794 BMP15O95972 392 aa18.32■□□□□ 0.52
ARHGEF28-201ENST00000296794 CCDC40Q4G0X9 1142 aa18.32■□□□□ 0.52
ARHGEF28-201ENST00000296794 EHBP1Q8NDI1 1231 aa18.32■□□□□ 0.52
ARHGEF28-201ENST00000296794 JDP2Q8WYK2 163 aa18.32■□□□□ 0.52
ARHGEF28-201ENST00000296794 CCDC113Q9H0I3 377 aa18.32■□□□□ 0.52
ARHGEF28-201ENST00000296794 BICC1Q9H694 974 aaKnown RBP18.32■□□□□ 0.52
ARHGEF28-201ENST00000296794 ANKRD62A6NC57 917 aa18.32■□□□□ 0.52
ARHGEF28-201ENST00000296794 HLTFQ14527 1009 aaKnown RBP eCLIP18.32■□□□□ 0.52
ARHGEF28-201ENST00000296794 NAA15Q9BXJ9 866 aaKnown RBP18.32■□□□□ 0.52
ARHGEF28-201ENST00000296794 NSFL1CQ9UNZ2 370 aaKnown RBP18.32■□□□□ 0.52
ARHGEF28-201ENST00000296794 PTPRTO14522 1441 aa18.32■□□□□ 0.52
ARHGEF28-201ENST00000296794 CTAGE15A4D2H0 777 aa18.32■□□□□ 0.52
ARHGEF28-201ENST00000296794 CTAGE8P0CG41 777 aa18.32■□□□□ 0.52
ARHGEF28-201ENST00000296794 CYP7A1P22680 504 aa18.32■□□□□ 0.52
ARHGEF28-201ENST00000296794 CTAGE6Q86UF2 777 aa18.32■□□□□ 0.52
ARHGEF28-201ENST00000296794 CTAGE4Q8IX94 777 aa18.32■□□□□ 0.52
ARHGEF28-201ENST00000296794 TIGD1Q96MW7 591 aa18.32■□□□□ 0.52
ARHGEF28-201ENST00000296794 IQSEC3Q9UPP2 1182 aaPredicted RBP18.32■□□□□ 0.52
ARHGEF28-201ENST00000296794 TMTC2Q8N394 836 aa18.31■□□□□ 0.52
ARHGEF28-201ENST00000296794 SGSM2O43147 1006 aa18.31■□□□□ 0.52
ARHGEF28-201ENST00000296794 SSR1P43307 286 aaKnown RBP18.31■□□□□ 0.52
ARHGEF28-201ENST00000296794 ZNF804AQ7Z570 1209 aa18.31■□□□□ 0.52
ARHGEF28-201ENST00000296794 DYDC1Q8WWB3 177 aa18.31■□□□□ 0.52
ARHGEF28-201ENST00000296794 MYCNP04198 464 aaPredicted RBP18.31■□□□□ 0.52
ARHGEF28-201ENST00000296794 RPS6KB1P23443 525 aa18.31■□□□□ 0.52
ARHGEF28-201ENST00000296794 SPAG1Q07617 926 aa18.31■□□□□ 0.52
ARHGEF28-201ENST00000296794 SYT10Q6XYQ8 523 aa18.31■□□□□ 0.52
ARHGEF28-201ENST00000296794 DISP1Q96F81 1524 aa18.3■□□□□ 0.52
ARHGEF28-201ENST00000296794 MCM6Q14566 821 aa18.3■□□□□ 0.52
ARHGEF28-201ENST00000296794 FAM107BQ9H098 131 aa18.3■□□□□ 0.52
ARHGEF28-201ENST00000296794 VAT1LQ9HCJ6 419 aa18.3■□□□□ 0.52
ARHGEF28-201ENST00000296794 BCCIPQ9P287 314 aaKnown RBP eCLIP18.3■□□□□ 0.52
ARHGEF28-201ENST00000296794 SLC4A4Q9Y6R1 1079 aa18.3■□□□□ 0.52
ARHGEF28-201ENST00000296794 GADD45BO75293 160 aaPredicted RBP18.3■□□□□ 0.52
ARHGEF28-201ENST00000296794 EIF4G3O43432 1585 aaKnown RBP18.3■□□□□ 0.52
ARHGEF28-201ENST00000296794 CCDC175P0C221 793 aa18.3■□□□□ 0.52
ARHGEF28-201ENST00000296794 FAM173BQ6P4H8 233 aa18.3■□□□□ 0.52
ARHGEF28-201ENST00000296794 ESR2Q92731 530 aa18.3■□□□□ 0.52
ARHGEF28-201ENST00000296794 AOX1Q06278 1338 aa18.3■□□□□ 0.52
ARHGEF28-201ENST00000296794 AKR1B10O60218 316 aa18.3■□□□□ 0.52
ARHGEF28-201ENST00000296794 TRAF1Q13077 416 aa18.3■□□□□ 0.52
ARHGEF28-201ENST00000296794 TRAPPC3LQ5T215 181 aa18.3■□□□□ 0.52
ARHGEF28-201ENST00000296794 NAA16Q6N069 864 aaPredicted RBP18.3■□□□□ 0.52
ARHGEF28-201ENST00000296794 PNMA6EA0A0J9YXQ4 647 aa18.29■□□□□ 0.52
ARHGEF28-201ENST00000296794 RNF187Q5TA31 235 aaPredicted RBP18.29■□□□□ 0.52
ARHGEF28-201ENST00000296794 BRAPQ7Z569 592 aa18.29■□□□□ 0.52
ARHGEF28-201ENST00000296794 GCC2Q8IWJ2 1684 aa18.29■□□□□ 0.52
ARHGEF28-201ENST00000296794 DNAI2Q9GZS0 605 aa18.29■□□□□ 0.52
ARHGEF28-201ENST00000296794 F8W031 263 aaPredicted RBP18.29■□□□□ 0.52
ARHGEF28-201ENST00000296794 IRS4O14654 1257 aaPredicted RBP18.29■□□□□ 0.52
ARHGEF28-201ENST00000296794 SLC27A2O14975 620 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms