RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 GUCY1B3Q02153 619 aa16.99■□□□□ 0.31
PDLIM2-201ENST00000265810 HELLSQ9NRZ9 838 aa16.99■□□□□ 0.31
PDLIM2-201ENST00000265810 TLR7Q9NYK1 1049 aaKnown RBP16.99■□□□□ 0.31
PDLIM2-201ENST00000265810 ADCY9O60503 1353 aa16.99■□□□□ 0.31
PDLIM2-201ENST00000265810 TSPY2A6NKD2 308 aa16.99■□□□□ 0.31
PDLIM2-201ENST00000265810 MICU3Q86XE3 530 aa16.99■□□□□ 0.31
PDLIM2-201ENST00000265810 GOLGA6L19H0YKK7 550 aa16.99■□□□□ 0.31
PDLIM2-201ENST00000265810 LDHBP07195 334 aaKnown RBP16.99■□□□□ 0.31
PDLIM2-201ENST00000265810 PDE4BQ07343 736 aa16.99■□□□□ 0.31
PDLIM2-201ENST00000265810 DBNLQ9UJU6 430 aaKnown RBP16.99■□□□□ 0.31
PDLIM2-201ENST00000265810 GGA1Q9UJY5 639 aa16.99■□□□□ 0.31
PDLIM2-201ENST00000265810 ERFEQ4G0M1 354 aa16.98■□□□□ 0.31
PDLIM2-201ENST00000265810 CHST3Q7LGC8 479 aa16.98■□□□□ 0.31
PDLIM2-201ENST00000265810 SYNE4Q8N205 404 aa16.98■□□□□ 0.31
PDLIM2-201ENST00000265810 MBD4O95243 580 aa16.98■□□□□ 0.31
PDLIM2-201ENST00000265810 CPA1P15085 419 aa16.98■□□□□ 0.31
PDLIM2-201ENST00000265810 POLA2Q14181 598 aa16.98■□□□□ 0.31
PDLIM2-201ENST00000265810 FLAD1Q8NFF5 587 aa16.98■□□□□ 0.31
PDLIM2-201ENST00000265810 CTCFLQ8NI51 663 aaPredicted RBP16.98■□□□□ 0.31
PDLIM2-201ENST00000265810 CCDC196A0A1B0GTZ2 297 aa16.97■□□□□ 0.31
PDLIM2-201ENST00000265810 GOLGA8AA7E2F4 631 aa16.97■□□□□ 0.31
PDLIM2-201ENST00000265810 RPS6KA4O75676 772 aa16.97■□□□□ 0.31
PDLIM2-201ENST00000265810 RBM6P78332 1123 aaKnown RBP16.97■□□□□ 0.31
PDLIM2-201ENST00000265810 MEGF6O75095 1541 aa16.97■□□□□ 0.31
PDLIM2-201ENST00000265810 GJB2P29033 226 aa16.97■□□□□ 0.31
PDLIM2-201ENST00000265810 ME1P48163 572 aa16.97■□□□□ 0.31
PDLIM2-201ENST00000265810 SPATA5Q8NB90 893 aa16.97■□□□□ 0.31
PDLIM2-201ENST00000265810 PDE8BO95263 885 aa16.97■□□□□ 0.31
PDLIM2-201ENST00000265810 RBM25P49756 843 aaKnown RBP16.97■□□□□ 0.31
PDLIM2-201ENST00000265810 SASS6Q6UVJ0 657 aa16.97■□□□□ 0.31
PDLIM2-201ENST00000265810 Q6ZUG5 572 aa16.97■□□□□ 0.31
PDLIM2-201ENST00000265810 SNX21Q969T3 373 aa16.97■□□□□ 0.31
PDLIM2-201ENST00000265810 H0YIN7 160 aa16.97■□□□□ 0.31
PDLIM2-201ENST00000265810 CLSTN1O94985 981 aa16.97■□□□□ 0.31
PDLIM2-201ENST00000265810 NLGN1Q8N2Q7 840 aa16.97■□□□□ 0.31
PDLIM2-201ENST00000265810 APPBP2Q92624 585 aa16.97■□□□□ 0.31
PDLIM2-201ENST00000265810 EYA3Q99504 573 aa16.97■□□□□ 0.31
PDLIM2-201ENST00000265810 FBXO3Q9UK99 471 aa16.97■□□□□ 0.31
PDLIM2-201ENST00000265810 SASH1O94885 1247 aa16.96■□□□□ 0.31
PDLIM2-201ENST00000265810 STAP2Q9UGK3 403 aa16.96■□□□□ 0.31
PDLIM2-201ENST00000265810 CHRNDQ07001 517 aa16.96■□□□□ 0.31
PDLIM2-201ENST00000265810 NKX1-1Q15270 411 aaPredicted RBP16.96■□□□□ 0.31
PDLIM2-201ENST00000265810 BARGINQ6ZT62 677 aa16.96■□□□□ 0.31
PDLIM2-201ENST00000265810 KLF18A0A0U1RQI7 1052 aa16.96■□□□□ 0.31
PDLIM2-201ENST00000265810 HMGN5P82970 282 aaKnown RBP16.96■□□□□ 0.31
PDLIM2-201ENST00000265810 WASF1Q92558 559 aa16.96■□□□□ 0.31
PDLIM2-201ENST00000265810 ADORA1P30542 326 aa16.96■□□□□ 0.3
PDLIM2-201ENST00000265810 GYG1P46976 350 aa16.96■□□□□ 0.3
PDLIM2-201ENST00000265810 AK2P54819 239 aa16.96■□□□□ 0.3
PDLIM2-201ENST00000265810 SOGA3Q5TF21 947 aa16.96■□□□□ 0.3
PDLIM2-201ENST00000265810 TTLL11Q8NHH1 800 aa16.96■□□□□ 0.3
PDLIM2-201ENST00000265810 TNPO1Q92973 898 aaKnown RBP16.96■□□□□ 0.3
PDLIM2-201ENST00000265810 C8orf76Q96K31 380 aa16.96■□□□□ 0.3
PDLIM2-201ENST00000265810 SPATA32Q96LK8 384 aa16.96■□□□□ 0.3
PDLIM2-201ENST00000265810 PDIA4P13667 645 aaKnown RBP16.95■□□□□ 0.3
PDLIM2-201ENST00000265810 CCDC102BQ68D86 513 aa16.95■□□□□ 0.3
PDLIM2-201ENST00000265810 GPAA1O43292 621 aa16.95■□□□□ 0.3
PDLIM2-201ENST00000265810 GNAT2P19087 354 aa16.95■□□□□ 0.3
PDLIM2-201ENST00000265810 BCAMP50895 628 aa16.95■□□□□ 0.3
PDLIM2-201ENST00000265810 PICALMQ13492 652 aa16.95■□□□□ 0.3
PDLIM2-201ENST00000265810 CATIPQ7Z7H3 387 aa16.95■□□□□ 0.3
PDLIM2-201ENST00000265810 HOOK1Q9UJC3 728 aaKnown RBP16.95■□□□□ 0.3
PDLIM2-201ENST00000265810 SERPINB2P05120 415 aa16.95■□□□□ 0.3
PDLIM2-201ENST00000265810 KINO60870 393 aaKnown RBP16.94■□□□□ 0.3
PDLIM2-201ENST00000265810 CIAO1O76071 339 aa16.94■□□□□ 0.3
PDLIM2-201ENST00000265810 TPD52L1Q16890 204 aaPredicted RBP16.94■□□□□ 0.3
PDLIM2-201ENST00000265810 KRT23Q9C075 422 aa16.94■□□□□ 0.3
PDLIM2-201ENST00000265810 OSBPL3Q9H4L5 887 aa16.94■□□□□ 0.3
PDLIM2-201ENST00000265810 ARMT1Q9H993 441 aa16.94■□□□□ 0.3
PDLIM2-201ENST00000265810 MCM9Q9NXL9 1143 aa16.94■□□□□ 0.3
PDLIM2-201ENST00000265810 TCEAL9Q9UHQ7 104 aa16.94■□□□□ 0.3
PDLIM2-201ENST00000265810 CLEC4GQ6UXB4 293 aa16.94■□□□□ 0.3
PDLIM2-201ENST00000265810 DPP8Q6V1X1 898 aaPredicted RBP16.94■□□□□ 0.3
PDLIM2-201ENST00000265810 SMIM5Q71RC9 77 aa16.94■□□□□ 0.3
PDLIM2-201ENST00000265810 ESR2Q92731 530 aa16.94■□□□□ 0.3
PDLIM2-201ENST00000265810 CFAP45Q9UL16 551 aa16.94■□□□□ 0.3
PDLIM2-201ENST00000265810 STX8Q9UNK0 236 aa16.94■□□□□ 0.3
PDLIM2-201ENST00000265810 PRC1O43663 620 aa16.94■□□□□ 0.3
PDLIM2-201ENST00000265810 METAP2P50579 478 aaKnown RBP eCLIP16.94■□□□□ 0.3
PDLIM2-201ENST00000265810 RNF214Q8ND24 703 aa16.94■□□□□ 0.3
PDLIM2-201ENST00000265810 DCAF8L1A6NGE4 600 aa16.93■□□□□ 0.3
PDLIM2-201ENST00000265810 JMYQ8N9B5 988 aa16.93■□□□□ 0.3
PDLIM2-201ENST00000265810 KIAA2012Q0VF49 1180 aa16.93■□□□□ 0.3
PDLIM2-201ENST00000265810 WTAPQ15007 396 aa16.93■□□□□ 0.3
PDLIM2-201ENST00000265810 STX6O43752 255 aa16.93■□□□□ 0.3
PDLIM2-201ENST00000265810 OGFOD1Q8N543 542 aa16.93■□□□□ 0.3
PDLIM2-201ENST00000265810 SEC62Q99442 399 aaKnown RBP16.93■□□□□ 0.3
PDLIM2-201ENST00000265810 HAUS7Q99871 368 aa16.93■□□□□ 0.3
PDLIM2-201ENST00000265810 CNNM2Q9H8M5 875 aa16.93■□□□□ 0.3
PDLIM2-201ENST00000265810 SLC27A2O14975 620 aa16.92■□□□□ 0.3
PDLIM2-201ENST00000265810 HLA-DOAP06340 250 aa16.92■□□□□ 0.3
PDLIM2-201ENST00000265810 PHKA1P46020 1223 aa16.92■□□□□ 0.3
PDLIM2-201ENST00000265810 MTX1Q13505 466 aa16.92■□□□□ 0.3
PDLIM2-201ENST00000265810 ISCA1Q9BUE6 129 aa16.92■□□□□ 0.3
PDLIM2-201ENST00000265810 ORC3Q9UBD5 711 aaPredicted RBP16.92■□□□□ 0.3
PDLIM2-201ENST00000265810 ZNF532Q9HCE3 1301 aa16.92■□□□□ 0.3
PDLIM2-201ENST00000265810 A0A0D9SFI3 127 aa16.92■□□□□ 0.3
PDLIM2-201ENST00000265810 IARSP41252 1262 aaKnown RBP16.92■□□□□ 0.3
PDLIM2-201ENST00000265810 RUFY3Q7L099 469 aa16.92■□□□□ 0.3
PDLIM2-201ENST00000265810 SNX14Q9Y5W7 946 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms