RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 TXNRD1Q16881 649 aa11.19□□□□□ -0.62
SIM1-201ENST00000262901 LMBR1LQ6UX01 489 aa11.19□□□□□ -0.62
SIM1-201ENST00000262901 FILIP1Q7Z7B0 1213 aa11.19□□□□□ -0.62
SIM1-201ENST00000262901 LRRC37A3O60309 1634 aa11.19□□□□□ -0.62
SIM1-201ENST00000262901 SH3TC1Q8TE82 1336 aa11.19□□□□□ -0.62
SIM1-201ENST00000262901 SMC2O95347 1197 aa11.19□□□□□ -0.62
SIM1-201ENST00000262901 EIF5P55010 431 aaKnown RBP11.19□□□□□ -0.62
SIM1-201ENST00000262901 FLAD1Q8NFF5 587 aa11.19□□□□□ -0.62
SIM1-201ENST00000262901 SGSM3Q96HU1 749 aa11.19□□□□□ -0.62
SIM1-201ENST00000262901 BICC1Q9H694 974 aaKnown RBP11.19□□□□□ -0.62
SIM1-201ENST00000262901 CNNM1Q9NRU3 951 aa11.19□□□□□ -0.62
SIM1-201ENST00000262901 MTMR7Q9Y216 660 aa11.19□□□□□ -0.62
SIM1-201ENST00000262901 FSD2A1L4K1 749 aa11.19□□□□□ -0.62
SIM1-201ENST00000262901 IRS4O14654 1257 aaPredicted RBP11.19□□□□□ -0.62
SIM1-201ENST00000262901 SETQ01105 290 aaPredicted RBP11.19□□□□□ -0.62
SIM1-201ENST00000262901 SMC5Q8IY18 1101 aa11.19□□□□□ -0.62
SIM1-201ENST00000262901 FAM89AQ96GI7 184 aa11.19□□□□□ -0.62
SIM1-201ENST00000262901 SUCLG2Q96I99 432 aa11.19□□□□□ -0.62
SIM1-201ENST00000262901 SPATA32Q96LK8 384 aa11.19□□□□□ -0.62
SIM1-201ENST00000262901 COL15A1P39059 1388 aa11.19□□□□□ -0.62
SIM1-201ENST00000262901 CNTNAP4Q9C0A0 1308 aa11.19□□□□□ -0.62
SIM1-201ENST00000262901 FKBP4Q02790 459 aaKnown RBP eCLIP11.18□□□□□ -0.62
SIM1-201ENST00000262901 STK38Q15208 465 aa11.18□□□□□ -0.62
SIM1-201ENST00000262901 RRP12Q5JTH9 1297 aaKnown RBP11.18□□□□□ -0.62
SIM1-201ENST00000262901 TPTE2Q6XPS3 522 aa11.18□□□□□ -0.62
SIM1-201ENST00000262901 PDILTQ8N807 584 aa11.18□□□□□ -0.62
SIM1-201ENST00000262901 ZNF513Q8N8E2 541 aaPredicted RBP11.18□□□□□ -0.62
SIM1-201ENST00000262901 LINC00116Q8NCU8 138 aa11.18□□□□□ -0.62
SIM1-201ENST00000262901 MPHOSPH8Q99549 860 aa11.18□□□□□ -0.62
SIM1-201ENST00000262901 DCTPP1Q9H773 170 aa11.18□□□□□ -0.62
SIM1-201ENST00000262901 PXDNLA1KZ92 1463 aa11.18□□□□□ -0.62
SIM1-201ENST00000262901 ANKRD18BA2A2Z9 1011 aa11.18□□□□□ -0.62
SIM1-201ENST00000262901 TNNT3P45378 269 aaPredicted RBP11.18□□□□□ -0.62
SIM1-201ENST00000262901 MAP2K1Q02750 393 aaPredicted RBP11.18□□□□□ -0.62
SIM1-201ENST00000262901 POTEAQ6S8J7 498 aa11.18□□□□□ -0.62
SIM1-201ENST00000262901 SCN11AQ9UI33 1791 aa11.18□□□□□ -0.62
SIM1-201ENST00000262901 HIP1O00291 1037 aa11.18□□□□□ -0.62
SIM1-201ENST00000262901 IGKV5-2P06315 115 aa11.18□□□□□ -0.62
SIM1-201ENST00000262901 TCEANC2Q96MN5 208 aa11.18□□□□□ -0.62
SIM1-201ENST00000262901 ATP10DQ9P241 1426 aa11.18□□□□□ -0.62
SIM1-201ENST00000262901 GLRX3O76003 335 aaKnown RBP11.18□□□□□ -0.62
SIM1-201ENST00000262901 PCCAP05165 728 aaPredicted RBP11.18□□□□□ -0.62
SIM1-201ENST00000262901 ZGPATQ8N5A5 531 aaKnown RBP11.18□□□□□ -0.62
SIM1-201ENST00000262901 SLC4A9Q96Q91 983 aa11.18□□□□□ -0.62
SIM1-201ENST00000262901 CEP126Q9P2H0 1117 aa11.18□□□□□ -0.62
SIM1-201ENST00000262901 TFIP11Q9UBB9 837 aaKnown RBP11.18□□□□□ -0.62
SIM1-201ENST00000262901 ADRA2BP18089 450 aa11.17□□□□□ -0.62
SIM1-201ENST00000262901 IGHMBP2P38935 993 aaKnown RBP11.17□□□□□ -0.62
SIM1-201ENST00000262901 USPL1Q5W0Q7 1092 aa11.17□□□□□ -0.62
SIM1-201ENST00000262901 CLEC4GQ6UXB4 293 aa11.17□□□□□ -0.62
SIM1-201ENST00000262901 VPS37DQ86XT2 251 aa11.17□□□□□ -0.62
SIM1-201ENST00000262901 NUP62CLQ9H1M0 184 aa11.17□□□□□ -0.62
SIM1-201ENST00000262901 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.17□□□□□ -0.62
SIM1-201ENST00000262901 MARCH6O60337 910 aa11.17□□□□□ -0.62
SIM1-201ENST00000262901 KLHL40Q2TBA0 621 aa11.17□□□□□ -0.62
SIM1-201ENST00000262901 CKAP2LQ8IYA6 745 aa11.17□□□□□ -0.62
SIM1-201ENST00000262901 ZBTB38Q8NAP3 1195 aaPredicted RBP11.17□□□□□ -0.62
SIM1-201ENST00000262901 OTUD7AQ8TE49 926 aaPredicted RBP11.17□□□□□ -0.62
SIM1-201ENST00000262901 TMX3Q96JJ7 454 aa11.17□□□□□ -0.62
SIM1-201ENST00000262901 CCDC152Q4G0S7 254 aa11.17□□□□□ -0.62
SIM1-201ENST00000262901 INTS5Q6P9B9 1019 aaKnown RBP11.17□□□□□ -0.62
SIM1-201ENST00000262901 NBPF11Q86T75 865 aa11.17□□□□□ -0.62
SIM1-201ENST00000262901 DTNBO60941 627 aa11.16□□□□□ -0.62
SIM1-201ENST00000262901 HLFQ16534 295 aa11.16□□□□□ -0.62
SIM1-201ENST00000262901 DNAJC21Q5F1R6 531 aaKnown RBP11.16□□□□□ -0.62
SIM1-201ENST00000262901 TTLL5Q6EMB2 1281 aa11.16□□□□□ -0.62
SIM1-201ENST00000262901 CEP120Q8N960 986 aa11.16□□□□□ -0.62
SIM1-201ENST00000262901 NARFQ9UHQ1 456 aa11.16□□□□□ -0.62
SIM1-201ENST00000262901 NRAPQ86VF7 1730 aa11.16□□□□□ -0.62
SIM1-201ENST00000262901 PDE8AO60658 829 aa11.16□□□□□ -0.62
SIM1-201ENST00000262901 TNNT1P13805 278 aa11.16□□□□□ -0.62
SIM1-201ENST00000262901 PDE1AP54750 535 aa11.16□□□□□ -0.62
SIM1-201ENST00000262901 TRIM28Q13263 835 aaKnown RBP11.16□□□□□ -0.62
SIM1-201ENST00000262901 SAFBQ15424 915 aaKnown RBP eCLIP11.16□□□□□ -0.62
SIM1-201ENST00000262901 CC2D2BQ6DHV5 1058 aa11.16□□□□□ -0.62
SIM1-201ENST00000262901 NLRP10Q86W26 655 aa11.16□□□□□ -0.62
SIM1-201ENST00000262901 MNS1Q8NEH6 495 aa11.16□□□□□ -0.62
SIM1-201ENST00000262901 NLRP3Q96P20 1036 aa11.16□□□□□ -0.62
SIM1-201ENST00000262901 RAD21O60216 631 aa11.16□□□□□ -0.62
SIM1-201ENST00000262901 TERF1P54274 439 aa11.16□□□□□ -0.62
SIM1-201ENST00000262901 ST5P78524 1137 aa11.16□□□□□ -0.62
SIM1-201ENST00000262901 HMGN5P82970 282 aaKnown RBP11.16□□□□□ -0.62
SIM1-201ENST00000262901 GUCY1B3Q02153 619 aa11.16□□□□□ -0.62
SIM1-201ENST00000262901 ISCA1Q9BUE6 129 aa11.16□□□□□ -0.62
SIM1-201ENST00000262901 PNMA6EA0A0J9YXQ4 647 aa11.15□□□□□ -0.62
SIM1-201ENST00000262901 SATB1Q01826 763 aa11.15□□□□□ -0.62
SIM1-201ENST00000262901 PTF1AQ7RTS3 328 aa11.15□□□□□ -0.62
SIM1-201ENST00000262901 CDC5LQ99459 802 aaKnown RBP11.15□□□□□ -0.62
SIM1-201ENST00000262901 CEP83Q9Y592 693 aa11.15□□□□□ -0.62
SIM1-201ENST00000262901 ERICH2A1L162 156 aa11.15□□□□□ -0.62
SIM1-201ENST00000262901 TSR1Q2NL82 804 aaKnown RBP11.15□□□□□ -0.62
SIM1-201ENST00000262901 FAM177A1Q8N128 213 aaPredicted RBP11.15□□□□□ -0.62
SIM1-201ENST00000262901 SSH3Q8TE77 659 aa11.15□□□□□ -0.62
SIM1-201ENST00000262901 NAT10Q9H0A0 1025 aaKnown RBP11.15□□□□□ -0.62
SIM1-201ENST00000262901 TPM1P09493 284 aa11.15□□□□□ -0.63
SIM1-201ENST00000262901 ZSCAN23Q3MJ62 389 aa11.15□□□□□ -0.63
SIM1-201ENST00000262901 GOLGA6L1Q8N7Z2 621 aa11.15□□□□□ -0.63
SIM1-201ENST00000262901 RHPN1Q8TCX5 695 aa11.15□□□□□ -0.63
SIM1-201ENST00000262901 PCMTD1Q96MG8 357 aaPredicted RBP11.15□□□□□ -0.63
SIM1-201ENST00000262901 MAFGO15525 162 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 911.1 ms