RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 LMBR1Q8WVP7 490 aa12.17□□□□□ -0.46
SLC6A4-201ENST00000261707 TNNC1P63316 161 aa12.16□□□□□ -0.46
SLC6A4-201ENST00000261707 RABGAP1Q9Y3P9 1069 aa12.16□□□□□ -0.46
SLC6A4-201ENST00000261707 CAPN7Q9Y6W3 813 aa12.16□□□□□ -0.46
SLC6A4-201ENST00000261707 IARSP41252 1262 aaKnown RBP12.16□□□□□ -0.46
SLC6A4-201ENST00000261707 TUBB2AQ13885 445 aa12.16□□□□□ -0.46
SLC6A4-201ENST00000261707 TUBB2BQ9BVA1 445 aa12.16□□□□□ -0.46
SLC6A4-201ENST00000261707 TCP11L1Q9NUJ3 509 aa12.16□□□□□ -0.46
SLC6A4-201ENST00000261707 ZWINTO95229 277 aa12.16□□□□□ -0.46
SLC6A4-201ENST00000261707 CCDC172P0C7W6 258 aa12.16□□□□□ -0.46
SLC6A4-201ENST00000261707 ALDH3A1P30838 453 aa12.16□□□□□ -0.46
SLC6A4-201ENST00000261707 ZNF444Q8N0Y2 327 aaPredicted RBP12.16□□□□□ -0.46
SLC6A4-201ENST00000261707 CCDC110Q8TBZ0 833 aa12.16□□□□□ -0.46
SLC6A4-201ENST00000261707 HMG20BQ9P0W2 317 aa12.16□□□□□ -0.46
SLC6A4-201ENST00000261707 PPFIA3O75145 1194 aa12.16□□□□□ -0.46
SLC6A4-201ENST00000261707 ACTN2P35609 894 aa12.16□□□□□ -0.46
SLC6A4-201ENST00000261707 MAP7D1Q3KQU3 841 aa12.16□□□□□ -0.46
SLC6A4-201ENST00000261707 METTL24Q5JXM2 366 aa12.16□□□□□ -0.46
SLC6A4-201ENST00000261707 TSGA10Q9BZW7 698 aa12.16□□□□□ -0.46
SLC6A4-201ENST00000261707 NCOA2Q15596 1464 aa12.16□□□□□ -0.46
SLC6A4-201ENST00000261707 GIGYF1O75420 1035 aaPredicted RBP12.16□□□□□ -0.46
SLC6A4-201ENST00000261707 TBC1D5Q92609 795 aa12.16□□□□□ -0.46
SLC6A4-201ENST00000261707 CCDC8Q9H0W5 538 aaPredicted RBP12.16□□□□□ -0.46
SLC6A4-201ENST00000261707 NAPBQ9H115 298 aa12.16□□□□□ -0.46
SLC6A4-201ENST00000261707 IFIT3O14879 490 aaKnown RBP12.15□□□□□ -0.46
SLC6A4-201ENST00000261707 IDEP14735 1019 aa12.15□□□□□ -0.46
SLC6A4-201ENST00000261707 HDAC1Q13547 482 aaPredicted RBP12.15□□□□□ -0.46
SLC6A4-201ENST00000261707 CCDC144CPQ8IYA2 1237 aa12.15□□□□□ -0.46
SLC6A4-201ENST00000261707 GBP5Q96PP8 586 aa12.15□□□□□ -0.46
SLC6A4-201ENST00000261707 NAPGQ99747 312 aaPredicted RBP12.15□□□□□ -0.46
SLC6A4-201ENST00000261707 MTRF1LQ9UGC7 380 aaKnown RBP12.15□□□□□ -0.46
SLC6A4-201ENST00000261707 IFIT1P09914 478 aaKnown RBP12.15□□□□□ -0.46
SLC6A4-201ENST00000261707 ZNF365Q70YC5 407 aa12.15□□□□□ -0.46
SLC6A4-201ENST00000261707 CABS1Q96KC9 395 aa12.15□□□□□ -0.46
SLC6A4-201ENST00000261707 SPATS2LQ9NUQ6 558 aaKnown RBP12.15□□□□□ -0.46
SLC6A4-201ENST00000261707 BAIAP2L1Q9UHR4 511 aa12.15□□□□□ -0.46
SLC6A4-201ENST00000261707 KIAA1107Q9UPP5 1409 aa12.15□□□□□ -0.46
SLC6A4-201ENST00000261707 MINDY4BA8MYZ0 360 aa12.15□□□□□ -0.46
SLC6A4-201ENST00000261707 PEX19P40855 299 aa12.15□□□□□ -0.46
SLC6A4-201ENST00000261707 RNF10Q8N5U6 811 aaKnown RBP12.15□□□□□ -0.46
SLC6A4-201ENST00000261707 CCDC42Q96M95 316 aa12.15□□□□□ -0.46
SLC6A4-201ENST00000261707 ARHGAP5Q13017 1502 aa12.15□□□□□ -0.46
SLC6A4-201ENST00000261707 NCBP1Q09161 790 aaKnown RBP12.15□□□□□ -0.47
SLC6A4-201ENST00000261707 SH2D4BQ5SQS7 431 aa12.15□□□□□ -0.47
SLC6A4-201ENST00000261707 NEK11Q8NG66 645 aa12.15□□□□□ -0.47
SLC6A4-201ENST00000261707 VEZTQ9HBM0 779 aa12.15□□□□□ -0.47
SLC6A4-201ENST00000261707 NKIRAS1Q9NYS0 192 aa12.15□□□□□ -0.47
SLC6A4-201ENST00000261707 HLA-DOAP06340 250 aa12.14□□□□□ -0.47
SLC6A4-201ENST00000261707 AKAP2Q9Y2D5 859 aa12.14□□□□□ -0.47
SLC6A4-201ENST00000261707 GOLGA6BA6NDN3 693 aa12.14□□□□□ -0.47
SLC6A4-201ENST00000261707 ATP2A1O14983 1001 aa12.14□□□□□ -0.47
SLC6A4-201ENST00000261707 SDSP20132 328 aa12.14□□□□□ -0.47
SLC6A4-201ENST00000261707 ATP5DP30049 168 aa12.14□□□□□ -0.47
SLC6A4-201ENST00000261707 METAP2P50579 478 aaKnown RBP eCLIP12.14□□□□□ -0.47
SLC6A4-201ENST00000261707 SAMM50Q9Y512 469 aa12.14□□□□□ -0.47
SLC6A4-201ENST00000261707 UBXN1Q04323 297 aa12.14□□□□□ -0.47
SLC6A4-201ENST00000261707 GSTA5Q7RTV2 222 aa12.14□□□□□ -0.47
SLC6A4-201ENST00000261707 PRAM1Q96QH2 718 aa12.14□□□□□ -0.47
SLC6A4-201ENST00000261707 SPAG5Q96R06 1193 aa12.14□□□□□ -0.47
SLC6A4-201ENST00000261707 TCIRG1Q13488 830 aa12.14□□□□□ -0.47
SLC6A4-201ENST00000261707 RBBP5Q15291 538 aaKnown RBP12.14□□□□□ -0.47
SLC6A4-201ENST00000261707 PPP1R9BQ96SB3 815 aa12.14□□□□□ -0.47
SLC6A4-201ENST00000261707 TSHZ3Q63HK5 1081 aa12.14□□□□□ -0.47
SLC6A4-201ENST00000261707 LMTK3Q96Q04 1460 aa12.14□□□□□ -0.47
SLC6A4-201ENST00000261707 ABCC11Q96J66 1382 aa12.14□□□□□ -0.47
SLC6A4-201ENST00000261707 CCDC25Q86WR0 208 aa12.13□□□□□ -0.47
SLC6A4-201ENST00000261707 AKR1B15C9JRZ8 316 aaPredicted RBP12.13□□□□□ -0.47
SLC6A4-201ENST00000261707 UBA7P41226 1012 aa12.13□□□□□ -0.47
SLC6A4-201ENST00000261707 GOLGA5Q8TBA6 731 aa12.13□□□□□ -0.47
SLC6A4-201ENST00000261707 TSC1Q92574 1164 aa12.13□□□□□ -0.47
SLC6A4-201ENST00000261707 ARHGEF2Q92974 986 aaKnown RBP12.13□□□□□ -0.47
SLC6A4-201ENST00000261707 GKAP1Q5VSY0 366 aaPredicted RBP12.13□□□□□ -0.47
SLC6A4-201ENST00000261707 ZGPATQ8N5A5 531 aaKnown RBP12.13□□□□□ -0.47
SLC6A4-201ENST00000261707 CDK19Q9BWU1 502 aa12.13□□□□□ -0.47
SLC6A4-201ENST00000261707 SLC26A6Q9BXS9 759 aa12.13□□□□□ -0.47
SLC6A4-201ENST00000261707 CCDC122Q5T0U0 273 aa12.13□□□□□ -0.47
SLC6A4-201ENST00000261707 FYB2Q5VWT5 728 aa12.13□□□□□ -0.47
SLC6A4-201ENST00000261707 ACSBG1Q96GR2 724 aa12.13□□□□□ -0.47
SLC6A4-201ENST00000261707 B4DLN1 442 aa12.13□□□□□ -0.47
SLC6A4-201ENST00000261707 E7EVH7 732 aa12.13□□□□□ -0.47
SLC6A4-201ENST00000261707 MRPL12P52815 198 aaKnown RBP12.13□□□□□ -0.47
SLC6A4-201ENST00000261707 ZNF445P59923 1031 aa12.13□□□□□ -0.47
SLC6A4-201ENST00000261707 RAB11FIP4Q86YS3 637 aa12.13□□□□□ -0.47
SLC6A4-201ENST00000261707 LRRC27Q9C0I9 530 aa12.13□□□□□ -0.47
SLC6A4-201ENST00000261707 PRKAG2Q9UGJ0 569 aa12.13□□□□□ -0.47
SLC6A4-201ENST00000261707 RIPOR2Q9Y4F9 1068 aa12.13□□□□□ -0.47
SLC6A4-201ENST00000261707 FRMD3A2A2Y4 597 aa12.12□□□□□ -0.47
SLC6A4-201ENST00000261707 LRRC45Q96CN5 670 aa12.12□□□□□ -0.47
SLC6A4-201ENST00000261707 THUMPD2Q9BTF0 503 aaKnown RBP12.12□□□□□ -0.47
SLC6A4-201ENST00000261707 MARCKSP29966 332 aaPredicted RBP12.12□□□□□ -0.47
SLC6A4-201ENST00000261707 CNGA4Q8IV77 575 aa12.12□□□□□ -0.47
SLC6A4-201ENST00000261707 TRIM4Q9C037 500 aa12.12□□□□□ -0.47
SLC6A4-201ENST00000261707 RLBP1P12271 317 aa12.12□□□□□ -0.47
SLC6A4-201ENST00000261707 CCDC174Q6PII3 467 aa12.12□□□□□ -0.47
SLC6A4-201ENST00000261707 CATIPQ7Z7H3 387 aa12.12□□□□□ -0.47
SLC6A4-201ENST00000261707 MMRN2Q9H8L6 949 aa12.12□□□□□ -0.47
SLC6A4-201ENST00000261707 MIS18AQ9NYP9 233 aa12.12□□□□□ -0.47
SLC6A4-201ENST00000261707 TPX2Q9ULW0 747 aaKnown RBP12.12□□□□□ -0.47
SLC6A4-201ENST00000261707 NSD3Q9BZ95 1437 aa12.12□□□□□ -0.47
SLC6A4-201ENST00000261707 TMEM110-MUSTN1A8MSY1 372 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms