RNA–Protein interactions for RNA: ENST00000250113.11

FXR2-201, Transcript of FMR1 autosomal homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXR2, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR2-201ENST00000250113 ITPK1Q13572 414 aa23.14■■□□□ 1.3
FXR2-201ENST00000250113 SMIM5Q71RC9 77 aa23.14■■□□□ 1.29
FXR2-201ENST00000250113 PUS7LQ9H0K6 701 aaKnown RBP23.14■■□□□ 1.29
FXR2-201ENST00000250113 RFX7Q2KHR2 1363 aa23.14■■□□□ 1.29
FXR2-201ENST00000250113 CDHR2Q9BYE9 1310 aa23.14■■□□□ 1.29
FXR2-201ENST00000250113 LOC102724428A0A0B4J2F2 783 aa23.13■■□□□ 1.29
FXR2-201ENST00000250113 MCAMP43121 646 aa23.13■■□□□ 1.29
FXR2-201ENST00000250113 SIK1P57059 783 aa23.13■■□□□ 1.29
FXR2-201ENST00000250113 APOBRQ0VD83 1088 aa23.13■■□□□ 1.29
FXR2-201ENST00000250113 ZSCAN30Q86W11 494 aa23.13■■□□□ 1.29
FXR2-201ENST00000250113 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.13■■□□□ 1.29
FXR2-201ENST00000250113 PDE8AO60658 829 aa23.13■■□□□ 1.29
FXR2-201ENST00000250113 CCDC87Q9NVE4 849 aa23.13■■□□□ 1.29
FXR2-201ENST00000250113 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.12■■□□□ 1.29
FXR2-201ENST00000250113 E7EWF7 191 aa23.12■■□□□ 1.29
FXR2-201ENST00000250113 EIF5P55010 431 aaKnown RBP23.12■■□□□ 1.29
FXR2-201ENST00000250113 SEC31BQ9NQW1 1179 aa23.12■■□□□ 1.29
FXR2-201ENST00000250113 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.12■■□□□ 1.29
FXR2-201ENST00000250113 CCT2P78371 535 aaKnown RBP23.12■■□□□ 1.29
FXR2-201ENST00000250113 ZNF34Q8IZ26 560 aa23.12■■□□□ 1.29
FXR2-201ENST00000250113 DSCC1Q9BVC3 393 aa23.12■■□□□ 1.29
FXR2-201ENST00000250113 ATP6V1DQ9Y5K8 247 aa23.12■■□□□ 1.29
FXR2-201ENST00000250113 RIC1Q4ADV7 1423 aa23.11■■□□□ 1.29
FXR2-201ENST00000250113 TFIP11Q9UBB9 837 aaKnown RBP23.11■■□□□ 1.29
FXR2-201ENST00000250113 ERVV-1B6SEH8 477 aa23.1■■□□□ 1.29
FXR2-201ENST00000250113 FAM98CQ17RN3 349 aaKnown RBP23.1■■□□□ 1.29
FXR2-201ENST00000250113 GPHNQ9NQX3 736 aaPredicted RBP23.1■■□□□ 1.29
FXR2-201ENST00000250113 FBXO3Q9UK99 471 aa23.1■■□□□ 1.29
FXR2-201ENST00000250113 PHKA1P46020 1223 aa23.1■■□□□ 1.29
FXR2-201ENST00000250113 DHX32Q7L7V1 743 aaKnown RBP23.1■■□□□ 1.29
FXR2-201ENST00000250113 GTF3C6Q969F1 213 aa23.1■■□□□ 1.29
FXR2-201ENST00000250113 ARID3AQ99856 593 aa23.1■■□□□ 1.29
FXR2-201ENST00000250113 IDH1O75874 414 aaKnown RBP23.1■■□□□ 1.29
FXR2-201ENST00000250113 SCRN1Q12765 414 aa23.1■■□□□ 1.29
FXR2-201ENST00000250113 ALDH8A1Q9H2A2 487 aaPredicted RBP23.1■■□□□ 1.29
FXR2-201ENST00000250113 NCOA5Q9HCD5 579 aaKnown RBP23.1■■□□□ 1.29
FXR2-201ENST00000250113 PDE8BO95263 885 aa23.09■■□□□ 1.29
FXR2-201ENST00000250113 LRP6O75581 1613 aa23.09■■□□□ 1.29
FXR2-201ENST00000250113 FOXP2O15409 715 aa23.09■■□□□ 1.29
FXR2-201ENST00000250113 GIMAP6Q6P9H5 292 aa23.09■■□□□ 1.29
FXR2-201ENST00000250113 VGLL2Q8N8G2 317 aa23.08■■□□□ 1.29
FXR2-201ENST00000250113 TSPY26PQ9H489 355 aa23.08■■□□□ 1.29
FXR2-201ENST00000250113 R3HCC1Q9Y3T6 440 aaKnown RBP23.08■■□□□ 1.29
FXR2-201ENST00000250113 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.08■■□□□ 1.29
FXR2-201ENST00000250113 NIP7Q9Y221 180 aaKnown RBP eCLIP23.08■■□□□ 1.29
FXR2-201ENST00000250113 FGAP02671 866 aa23.07■■□□□ 1.28
FXR2-201ENST00000250113 SLC9C2Q5TAH2 1124 aa23.07■■□□□ 1.28
FXR2-201ENST00000250113 C17orf53Q8N3J3 647 aaPredicted RBP23.07■■□□□ 1.28
FXR2-201ENST00000250113 USP25Q9UHP3 1055 aa23.07■■□□□ 1.28
FXR2-201ENST00000250113 SPATA31A5Q5VU36 1347 aa23.07■■□□□ 1.28
FXR2-201ENST00000250113 SPATA31A7Q8IWB4 1347 aa23.07■■□□□ 1.28
FXR2-201ENST00000250113 DOT1LQ8TEK3 1739 aa23.07■■□□□ 1.28
FXR2-201ENST00000250113 PTMAP06454 111 aaKnown RBP23.07■■□□□ 1.28
FXR2-201ENST00000250113 CCDC102BQ68D86 513 aa23.07■■□□□ 1.28
FXR2-201ENST00000250113 CDCA7Q9BWT1 371 aaPredicted RBP23.07■■□□□ 1.28
FXR2-201ENST00000250113 UBE2HP62256 183 aa23.07■■□□□ 1.28
FXR2-201ENST00000250113 PTF1AQ7RTS3 328 aa23.07■■□□□ 1.28
FXR2-201ENST00000250113 RAB11FIP4Q86YS3 637 aa23.07■■□□□ 1.28
FXR2-201ENST00000250113 TMEM87AQ8NBN3 555 aa23.07■■□□□ 1.28
FXR2-201ENST00000250113 SYAP1Q96A49 352 aaPredicted RBP23.07■■□□□ 1.28
FXR2-201ENST00000250113 PIH1D3Q9NQM4 214 aaKnown RBP23.07■■□□□ 1.28
FXR2-201ENST00000250113 AHDC1Q5TGY3 1603 aaPredicted RBP23.06■■□□□ 1.28
FXR2-201ENST00000250113 RBM10P98175 930 aaKnown RBP23.06■■□□□ 1.28
FXR2-201ENST00000250113 C8orf37Q96NL8 207 aa23.06■■□□□ 1.28
FXR2-201ENST00000250113 GPAA1O43292 621 aa23.06■■□□□ 1.28
FXR2-201ENST00000250113 PDCP20941 246 aa23.06■■□□□ 1.28
FXR2-201ENST00000250113 UTP14AQ9BVJ6 771 aaKnown RBP23.06■■□□□ 1.28
FXR2-201ENST00000250113 SLIT2O94813 1529 aa23.05■■□□□ 1.28
FXR2-201ENST00000250113 MPHOSPH8Q99549 860 aa23.05■■□□□ 1.28
FXR2-201ENST00000250113 THRAP3Q9Y2W1 955 aaKnown RBP23.05■■□□□ 1.28
FXR2-201ENST00000250113 NUP98P52948 1817 aa23.05■■□□□ 1.28
FXR2-201ENST00000250113 CAMTA2O94983 1202 aa23.05■■□□□ 1.28
FXR2-201ENST00000250113 EXOSC10Q01780 885 aaKnown RBP23.04■■□□□ 1.28
FXR2-201ENST00000250113 FAM182BQ5T319 152 aa23.04■■□□□ 1.28
FXR2-201ENST00000250113 TTC6Q86TZ1 520 aa23.04■■□□□ 1.28
FXR2-201ENST00000250113 APPBP2Q92624 585 aa23.04■■□□□ 1.28
FXR2-201ENST00000250113 APPP05067 770 aa23.04■■□□□ 1.28
FXR2-201ENST00000250113 HMGB1P09429 215 aaKnown RBP23.04■■□□□ 1.28
FXR2-201ENST00000250113 CAMK4Q16566 473 aa23.04■■□□□ 1.28
FXR2-201ENST00000250113 BICDL1Q6ZP65 573 aa23.04■■□□□ 1.28
FXR2-201ENST00000250113 FAM184AQ8NB25 1140 aa23.04■■□□□ 1.28
FXR2-201ENST00000250113 DENND2AQ9ULE3 1009 aa23.04■■□□□ 1.28
FXR2-201ENST00000250113 H3BQV1 296 aa23.03■■□□□ 1.28
FXR2-201ENST00000250113 IFFO2Q5TF58 517 aa23.03■■□□□ 1.28
FXR2-201ENST00000250113 ZFYP08048 801 aaPredicted RBP23.03■■□□□ 1.28
FXR2-201ENST00000250113 LRRFIP1Q32MZ4 808 aaKnown RBP23.03■■□□□ 1.28
FXR2-201ENST00000250113 PDLIM2Q96JY6 352 aa23.03■■□□□ 1.28
FXR2-201ENST00000250113 TAOK2Q9UL54 1235 aa23.03■■□□□ 1.28
FXR2-201ENST00000250113 CEBPZQ03701 1054 aaKnown RBP23.02■■□□□ 1.28
FXR2-201ENST00000250113 NGLY1Q96IV0 654 aa23.02■■□□□ 1.28
FXR2-201ENST00000250113 WWC3Q9ULE0 1092 aa23.02■■□□□ 1.28
FXR2-201ENST00000250113 CTDNEP1O95476 244 aa23.02■■□□□ 1.28
FXR2-201ENST00000250113 KRT85P78386 507 aa23.02■■□□□ 1.28
FXR2-201ENST00000250113 IMMTQ16891 758 aaKnown RBP23.02■■□□□ 1.28
FXR2-201ENST00000250113 PLCH1Q4KWH8 1693 aa23.02■■□□□ 1.28
FXR2-201ENST00000250113 GUCY1B3Q02153 619 aa23.01■■□□□ 1.27
FXR2-201ENST00000250113 IQSEC3Q9UPP2 1182 aaPredicted RBP23.01■■□□□ 1.27
FXR2-201ENST00000250113 COL22A1Q8NFW1 1626 aaPredicted RBP23.01■■□□□ 1.27
FXR2-201ENST00000250113 WTIPA6NIX2 430 aaPredicted RBP23.01■■□□□ 1.27
FXR2-201ENST00000250113 PUM3Q15397 648 aaKnown RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms