RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 CFAP47Q6ZTR5 3102 aa13.26□□□□□ -0.29
TRIM3-215ENST00000639856 WIPF3A6NGB9 483 aa13.26□□□□□ -0.29
TRIM3-215ENST00000639856 ITGB2P05107 769 aa13.26□□□□□ -0.29
TRIM3-215ENST00000639856 ANOS1P23352 680 aa13.26□□□□□ -0.29
TRIM3-215ENST00000639856 MAGEA5P43359 124 aa13.26□□□□□ -0.29
TRIM3-215ENST00000639856 CARD18P57730 90 aa13.26□□□□□ -0.29
TRIM3-215ENST00000639856 RAC3P60763 192 aa13.26□□□□□ -0.29
TRIM3-215ENST00000639856 RAP2BP61225 183 aa13.26□□□□□ -0.29
TRIM3-215ENST00000639856 HYAL4Q2M3T9 481 aa13.26□□□□□ -0.29
TRIM3-215ENST00000639856 TEX261Q6UWH6 196 aa13.26□□□□□ -0.29
TRIM3-215ENST00000639856 DOK3Q7L591 496 aa13.26□□□□□ -0.29
TRIM3-215ENST00000639856 TMPRSS7Q7RTY8 843 aa13.26□□□□□ -0.29
TRIM3-215ENST00000639856 ANGPTL5Q86XS5 388 aa13.26□□□□□ -0.29
TRIM3-215ENST00000639856 ZIC4Q8N9L1 334 aa13.26□□□□□ -0.29
TRIM3-215ENST00000639856 GJC3Q8NFK1 279 aa13.26□□□□□ -0.29
TRIM3-215ENST00000639856 ROBO4Q8WZ75 1007 aa13.26□□□□□ -0.29
TRIM3-215ENST00000639856 FAM71F1Q96KD3 344 aaPredicted RBP13.26□□□□□ -0.29
TRIM3-215ENST00000639856 ALX4Q9H161 411 aaPredicted RBP13.26□□□□□ -0.29
TRIM3-215ENST00000639856 EXO5Q9H790 373 aa13.26□□□□□ -0.29
TRIM3-215ENST00000639856 HEXA-AS1Q9H8Q6 139 aa13.26□□□□□ -0.29
TRIM3-215ENST00000639856 KLK13Q9UKR3 277 aa13.26□□□□□ -0.29
TRIM3-215ENST00000639856 U3KQ87 197 aa13.26□□□□□ -0.29
TRIM3-215ENST00000639856 OR5H15A6NDH6 313 aa13.25□□□□□ -0.29
TRIM3-215ENST00000639856 ZNF736B4DX44 427 aaPredicted RBP13.25□□□□□ -0.29
TRIM3-215ENST00000639856 ERVH48-1M5A8F1 160 aa13.25□□□□□ -0.29
TRIM3-215ENST00000639856 DHHO43323 396 aa13.25□□□□□ -0.29
TRIM3-215ENST00000639856 DNPH1O43598 174 aa13.25□□□□□ -0.29
TRIM3-215ENST00000639856 SCGNO76038 276 aa13.25□□□□□ -0.29
TRIM3-215ENST00000639856 CD74P04233 296 aa13.25□□□□□ -0.29
TRIM3-215ENST00000639856 ZNF81P51508 661 aa13.25□□□□□ -0.29
TRIM3-215ENST00000639856 ENDOGQ14249 297 aaKnown RBP13.25□□□□□ -0.29
TRIM3-215ENST00000639856 AWAT2Q6E213 333 aa13.25□□□□□ -0.29
TRIM3-215ENST00000639856 OR5AS1Q8N127 324 aa13.25□□□□□ -0.29
TRIM3-215ENST00000639856 FAM109AQ8N4B1 249 aa13.25□□□□□ -0.29
TRIM3-215ENST00000639856 NABP1Q96AH0 204 aa13.25□□□□□ -0.29
TRIM3-215ENST00000639856 ZNF845Q96IR2 970 aaPredicted RBP13.25□□□□□ -0.29
TRIM3-215ENST00000639856 SLC25A21Q9BQT8 299 aaPredicted RBP13.25□□□□□ -0.29
TRIM3-215ENST00000639856 TINAGL1Q9GZM7 467 aaPredicted RBP13.25□□□□□ -0.29
TRIM3-215ENST00000639856 UPB1Q9UBR1 384 aa13.25□□□□□ -0.29
TRIM3-215ENST00000639856 FOXD3Q9UJU5 478 aaPredicted RBP13.25□□□□□ -0.29
TRIM3-215ENST00000639856 TMEM14DPA8MWL7 114 aa13.25□□□□□ -0.29
TRIM3-215ENST00000639856 M0QYG6 137 aa13.25□□□□□ -0.29
TRIM3-215ENST00000639856 AMY2AP04746 511 aa13.25□□□□□ -0.29
TRIM3-215ENST00000639856 SP1P08047 785 aa13.25□□□□□ -0.29
TRIM3-215ENST00000639856 ZNF584Q8IVC4 421 aa13.25□□□□□ -0.29
TRIM3-215ENST00000639856 FTMTQ8N4E7 242 aa13.25□□□□□ -0.29
TRIM3-215ENST00000639856 OR2V1Q8NHB1 315 aa13.25□□□□□ -0.29
TRIM3-215ENST00000639856 PNPLA2Q96AD5 504 aa13.25□□□□□ -0.29
TRIM3-215ENST00000639856 INTS12Q96CB8 462 aaKnown RBP13.25□□□□□ -0.29
TRIM3-215ENST00000639856 SLC6A15Q9H2J7 730 aa13.25□□□□□ -0.29
TRIM3-215ENST00000639856 B4GALT7Q9UBV7 327 aa13.25□□□□□ -0.29
TRIM3-215ENST00000639856 NME2P1O60361 137 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 ZNF735P0CB33 412 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 NME2P22392 152 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 NTF4P34130 210 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 GSK3AP49840 483 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 MEOX1P50221 254 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 GNG2P59768 71 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 TSPAN5P62079 268 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 IGF2-ASQ6U949 168 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 PLXDC2Q6UX71 529 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 IDO2Q6ZQW0 420 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 CHMP1BQ7LBR1 199 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 MUC20Q8N307 709 aaPredicted RBP13.24□□□□□ -0.29
TRIM3-215ENST00000639856 TMEM251Q8N6I4 163 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 ZNF680Q8NEM1 530 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 CMBLQ96DG6 245 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 SPACA5Q96QH8 159 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 NUDT16L1Q9BRJ7 211 aaKnown RBP13.24□□□□□ -0.29
TRIM3-215ENST00000639856 SF3B5Q9BWJ5 86 aaKnown RBP13.24□□□□□ -0.29
TRIM3-215ENST00000639856 RBM24Q9BX46 236 aaKnown RBP13.24□□□□□ -0.29
TRIM3-215ENST00000639856 ZNF552Q9H707 407 aaPredicted RBP13.24□□□□□ -0.29
TRIM3-215ENST00000639856 CSAG2Q9Y5P2 127 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 E9PLN8 166 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 IGLV3-1P01715 115 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 HPNP05981 417 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 SSTR2P30874 369 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 HIST1H3AP68431 136 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 DHODHQ02127 395 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 PLGLB1Q02325 96 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 SRYQ05066 204 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 GFOD2Q3B7J2 385 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 CDNFQ49AH0 187 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 HIST2H3PS2Q5TEC6 136 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 HIST2H3AQ71DI3 136 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 RNF144BQ7Z419 303 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 FJX1Q86VR8 437 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 ZNF101Q8IZC7 436 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 CHST4Q8NCG5 386 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 OR2AK2Q8NG84 335 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 OR14K1Q8NGZ2 314 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 PGAM5Q96HS1 289 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 ULBP2Q9BZM5 246 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 CHST6Q9GZX3 395 aa13.24□□□□□ -0.29
TRIM3-215ENST00000639856 TMEM82A0PJX8 343 aa13.23□□□□□ -0.29
TRIM3-215ENST00000639856 ZNF716A6NP11 495 aa13.23□□□□□ -0.29
TRIM3-215ENST00000639856 ZNF84P51523 738 aa13.23□□□□□ -0.29
TRIM3-215ENST00000639856 RRADP55042 308 aa13.23□□□□□ -0.29
TRIM3-215ENST00000639856 ARG2P78540 354 aa13.23□□□□□ -0.29
TRIM3-215ENST00000639856 OR2W3Q7Z3T1 314 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 173.9 ms