RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 PITPNBP48739 271 aa14.78□□□□□ -0.04
PNKP-230ENST00000638016 CSNK2BP67870 215 aa14.78□□□□□ -0.04
PNKP-230ENST00000638016 ARMCX4Q5H9R4 360 aa14.78□□□□□ -0.04
PNKP-230ENST00000638016 SHFQ7M4L6 423 aa14.78□□□□□ -0.04
PNKP-230ENST00000638016 BPIFB2Q8N4F0 458 aa14.78□□□□□ -0.04
PNKP-230ENST00000638016 LYZL4Q96KX0 146 aa14.78□□□□□ -0.04
PNKP-230ENST00000638016 SLC22A4Q9H015 551 aa14.78□□□□□ -0.04
PNKP-230ENST00000638016 TOR3AQ9H497 397 aa14.78□□□□□ -0.04
PNKP-230ENST00000638016 FN3KRPQ9HA64 309 aa14.78□□□□□ -0.04
PNKP-230ENST00000638016 PAPOLBQ9NRJ5 636 aaKnown RBP14.78□□□□□ -0.04
PNKP-230ENST00000638016 RNF7Q9UBF6 113 aa14.78□□□□□ -0.04
PNKP-230ENST00000638016 MIOXQ9UGB7 285 aa14.78□□□□□ -0.04
PNKP-230ENST00000638016 IGHV3OR15-7A0A075B7D8 119 aa14.77□□□□□ -0.05
PNKP-230ENST00000638016 IGHV2-70DA0A0C4DH43 119 aa14.77□□□□□ -0.05
PNKP-230ENST00000638016 C22orf46C9J442 243 aa14.77□□□□□ -0.05
PNKP-230ENST00000638016 PRODHO43272 600 aa14.77□□□□□ -0.05
PNKP-230ENST00000638016 PRKYO43930 277 aa14.77□□□□□ -0.05
PNKP-230ENST00000638016 FCN3O75636 299 aa14.77□□□□□ -0.05
PNKP-230ENST00000638016 IGHV4-38-2P0DP08 117 aa14.77□□□□□ -0.05
PNKP-230ENST00000638016 GSK3AP49840 483 aa14.77□□□□□ -0.05
PNKP-230ENST00000638016 CRISP1P54107 249 aa14.77□□□□□ -0.05
PNKP-230ENST00000638016 PAX8Q06710 450 aa14.77□□□□□ -0.05
PNKP-230ENST00000638016 SNAPC1Q16533 368 aa14.77□□□□□ -0.05
PNKP-230ENST00000638016 ZNF841Q6ZN19 808 aa14.77□□□□□ -0.05
PNKP-230ENST00000638016 DCDC5Q6ZRR9 648 aa14.77□□□□□ -0.05
PNKP-230ENST00000638016 AMIGO2Q86SJ2 522 aa14.77□□□□□ -0.05
PNKP-230ENST00000638016 GCSAMQ8N6F7 178 aa14.77□□□□□ -0.05
PNKP-230ENST00000638016 ZDHHC22Q8N966 263 aa14.77□□□□□ -0.05
PNKP-230ENST00000638016 OR8B3Q8NGG8 313 aa14.77□□□□□ -0.05
PNKP-230ENST00000638016 ERGIC1Q969X5 290 aa14.77□□□□□ -0.05
PNKP-230ENST00000638016 PGAM5Q96HS1 289 aa14.77□□□□□ -0.05
PNKP-230ENST00000638016 PLEKHA8Q96JA3 519 aa14.77□□□□□ -0.05
PNKP-230ENST00000638016 DUX5Q96PT3 197 aa14.77□□□□□ -0.05
PNKP-230ENST00000638016 OR8B2Q96RD0 313 aa14.77□□□□□ -0.05
PNKP-230ENST00000638016 FGF23Q9GZV9 251 aaPredicted RBP14.77□□□□□ -0.05
PNKP-230ENST00000638016 MMADHCQ9H3L0 296 aaPredicted RBP14.77□□□□□ -0.05
PNKP-230ENST00000638016 COPS3Q9UNS2 423 aa14.77□□□□□ -0.05
PNKP-230ENST00000638016 RHBDD3Q9Y3P4 386 aa14.77□□□□□ -0.05
PNKP-230ENST00000638016 A0A0A6YYJ9 748 aa14.76□□□□□ -0.05
PNKP-230ENST00000638016 A0A1B0GW55 424 aa14.76□□□□□ -0.05
PNKP-230ENST00000638016 hCG_1807616A0A1W2PRN6 198 aa14.76□□□□□ -0.05
PNKP-230ENST00000638016 ANKRD30BLA7E2S9 258 aa14.76□□□□□ -0.05
PNKP-230ENST00000638016 DUX4L2P0CJ85 424 aa14.76□□□□□ -0.05
PNKP-230ENST00000638016 DUX4L3P0CJ86 424 aa14.76□□□□□ -0.05
PNKP-230ENST00000638016 DUX4L4P0CJ87 422 aa14.76□□□□□ -0.05
PNKP-230ENST00000638016 DUX4L5P0CJ88 424 aa14.76□□□□□ -0.05
PNKP-230ENST00000638016 DUX4L6P0CJ89 424 aa14.76□□□□□ -0.05
PNKP-230ENST00000638016 DUX4L7P0CJ90 424 aa14.76□□□□□ -0.05
PNKP-230ENST00000638016 HOXB6P17509 224 aaKnown RBP14.76□□□□□ -0.05
PNKP-230ENST00000638016 ACKR3P25106 362 aa14.76□□□□□ -0.05
PNKP-230ENST00000638016 PTGES3Q15185 160 aaKnown RBP14.76□□□□□ -0.05
PNKP-230ENST00000638016 WDR25Q64LD2 544 aaPredicted RBP14.76□□□□□ -0.05
PNKP-230ENST00000638016 DUX4L9Q6RFH8 374 aaPredicted RBP14.76□□□□□ -0.05
PNKP-230ENST00000638016 C11orf53Q8IXP5 236 aa14.76□□□□□ -0.05
PNKP-230ENST00000638016 FGFRL1Q8N441 504 aa14.76□□□□□ -0.05
PNKP-230ENST00000638016 TEX29Q8N6K0 151 aa14.76□□□□□ -0.05
PNKP-230ENST00000638016 SIGLECL1Q8N7X8 197 aa14.76□□□□□ -0.05
PNKP-230ENST00000638016 OR8B12Q8NGG6 310 aa14.76□□□□□ -0.05
PNKP-230ENST00000638016 OR5K1Q8NHB7 308 aa14.76□□□□□ -0.05
PNKP-230ENST00000638016 SEH1LQ96EE3 360 aa14.76□□□□□ -0.05
PNKP-230ENST00000638016 ZNF48Q96MX3 618 aaPredicted RBP14.76□□□□□ -0.05
PNKP-230ENST00000638016 MRI1Q9BV20 369 aa14.76□□□□□ -0.05
PNKP-230ENST00000638016 RASSF4Q9H2L5 321 aa14.76□□□□□ -0.05
PNKP-230ENST00000638016 OPA3Q9H6K4 179 aa14.76□□□□□ -0.05
PNKP-230ENST00000638016 SMURF1Q9HCE7 757 aa14.76□□□□□ -0.05
PNKP-230ENST00000638016 DUX4Q9UBX2 424 aa14.76□□□□□ -0.05
PNKP-230ENST00000638016 LRP12Q9Y561 859 aa14.76□□□□□ -0.05
PNKP-230ENST00000638016 LGALS8O00214 317 aa14.75□□□□□ -0.05
PNKP-230ENST00000638016 GYPAP02724 150 aa14.75□□□□□ -0.05
PNKP-230ENST00000638016 ALOX5APP20292 161 aa14.75□□□□□ -0.05
PNKP-230ENST00000638016 PSMB10P40306 273 aa14.75□□□□□ -0.05
PNKP-230ENST00000638016 PSMA6P60900 246 aaKnown RBP14.75□□□□□ -0.05
PNKP-230ENST00000638016 SCGB2A2Q13296 93 aa14.75□□□□□ -0.05
PNKP-230ENST00000638016 OR8B8Q15620 311 aa14.75□□□□□ -0.05
PNKP-230ENST00000638016 ATP6AP1Q15904 470 aa14.75□□□□□ -0.05
PNKP-230ENST00000638016 DMRTC1Q5HYR2 192 aa14.75□□□□□ -0.05
PNKP-230ENST00000638016 SLC35D3Q5M8T2 416 aa14.75□□□□□ -0.05
PNKP-230ENST00000638016 C1orf146Q5VVC0 180 aa14.75□□□□□ -0.05
PNKP-230ENST00000638016 USP43Q70EL4 1123 aa14.75□□□□□ -0.05
PNKP-230ENST00000638016 OR8S1Q8NH09 359 aa14.75□□□□□ -0.05
PNKP-230ENST00000638016 RAB40AQ8WXH6 277 aa14.75□□□□□ -0.05
PNKP-230ENST00000638016 NRBF2Q96F24 287 aa14.75□□□□□ -0.05
PNKP-230ENST00000638016 PAPOLGQ9BWT3 736 aaKnown RBP14.75□□□□□ -0.05
PNKP-230ENST00000638016 SUCNR1Q9BXA5 334 aa14.75□□□□□ -0.05
PNKP-230ENST00000638016 OR10A2Q9H208 303 aa14.75□□□□□ -0.05
PNKP-230ENST00000638016 CLN8Q9UBY8 286 aa14.75□□□□□ -0.05
PNKP-230ENST00000638016 NUP50Q9UKX7 468 aa14.75□□□□□ -0.05
PNKP-230ENST00000638016 NOP16Q9Y3C1 178 aaKnown RBP14.75□□□□□ -0.05
PNKP-230ENST00000638016 TENM1Q9UKZ4 2725 aa14.74□□□□□ -0.05
PNKP-230ENST00000638016 TRAV40A0A0B4J280 105 aa14.74□□□□□ -0.05
PNKP-230ENST00000638016 TNFRSF13BO14836 293 aaPredicted RBP14.74□□□□□ -0.05
PNKP-230ENST00000638016 MAGEB4O15481 346 aaPredicted RBP14.74□□□□□ -0.05
PNKP-230ENST00000638016 FSTL3O95633 263 aa14.74□□□□□ -0.05
PNKP-230ENST00000638016 DDOSTP39656 456 aa14.74□□□□□ -0.05
PNKP-230ENST00000638016 ACTG1P63261 375 aa14.74□□□□□ -0.05
PNKP-230ENST00000638016 NLRC3Q7RTR2 1065 aa14.74□□□□□ -0.05
PNKP-230ENST00000638016 FAM90A1Q86YD7 464 aa14.74□□□□□ -0.05
PNKP-230ENST00000638016 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.74□□□□□ -0.05
PNKP-230ENST00000638016 PARP8Q8N3A8 854 aa14.74□□□□□ -0.05
PNKP-230ENST00000638016 ZNF454Q8N9F8 522 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms