RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 ING4Q9UNL4 249 aa2.57□□□□□ -2
VIM-210ENST00000637053 SCML2Q9UQR0 700 aa2.57□□□□□ -2
VIM-210ENST00000637053 TRAPPC4Q9Y296 219 aa2.57□□□□□ -2
VIM-210ENST00000637053 SNX10Q9Y5X0 201 aa2.57□□□□□ -2
VIM-210ENST00000637053 SPIN1Q9Y657 262 aaPredicted RBP2.57□□□□□ -2
VIM-210ENST00000637053 ANKRD36BQ8N2N9 1353 aa2.57□□□□□ -2
VIM-210ENST00000637053 SETD5Q9C0A6 1442 aa2.57□□□□□ -2
VIM-210ENST00000637053 SPEF2Q9C093 1822 aa2.56□□□□□ -2
VIM-210ENST00000637053 CHD5Q8TDI0 1954 aa2.56□□□□□ -2
VIM-210ENST00000637053 KIR2DS5A0A0G2JLQ3 304 aa2.56□□□□□ -2
VIM-210ENST00000637053 A0A0G2JNG1 304 aa2.56□□□□□ -2
VIM-210ENST00000637053 A0A1B0GTH9 108 aa2.56□□□□□ -2
VIM-210ENST00000637053 EXOC1LA0A1B0GW35 172 aa2.56□□□□□ -2
VIM-210ENST00000637053 UBE2QL1A1L167 161 aa2.56□□□□□ -2
VIM-210ENST00000637053 ARL5CA6NH57 179 aa2.56□□□□□ -2
VIM-210ENST00000637053 FAM159BA6NKW6 160 aa2.56□□□□□ -2
VIM-210ENST00000637053 CLIC1O00299 241 aa2.56□□□□□ -2
VIM-210ENST00000637053 FAAHO00519 579 aa2.56□□□□□ -2
VIM-210ENST00000637053 MFNGO00587 321 aa2.56□□□□□ -2
VIM-210ENST00000637053 HSD17B6O14756 317 aa2.56□□□□□ -2
VIM-210ENST00000637053 MRASO14807 208 aa2.56□□□□□ -2
VIM-210ENST00000637053 GYG2O15488 501 aa2.56□□□□□ -2
VIM-210ENST00000637053 FABP7O15540 132 aa2.56□□□□□ -2
VIM-210ENST00000637053 SPINT2O43291 252 aa2.56□□□□□ -2
VIM-210ENST00000637053 ZIC3O60481 467 aa2.56□□□□□ -2
VIM-210ENST00000637053 GALR3O60755 368 aaPredicted RBP2.56□□□□□ -2
VIM-210ENST00000637053 CA11O75493 328 aa2.56□□□□□ -2
VIM-210ENST00000637053 SLC22A5O76082 557 aa2.56□□□□□ -2
VIM-210ENST00000637053 OR7C1O76099 320 aaPredicted RBP2.56□□□□□ -2
VIM-210ENST00000637053 MT-CO3P00414 261 aa2.56□□□□□ -2
VIM-210ENST00000637053 CRYGDP07320 174 aa2.56□□□□□ -2
VIM-210ENST00000637053 CYP2D6P10635 497 aa2.56□□□□□ -2
VIM-210ENST00000637053 ESDP10768 282 aa2.56□□□□□ -2
VIM-210ENST00000637053 CYBAP13498 195 aa2.56□□□□□ -2
VIM-210ENST00000637053 TBPP20226 339 aa2.56□□□□□ -2
VIM-210ENST00000637053 EDNRAP25101 427 aa2.56□□□□□ -2
VIM-210ENST00000637053 PLA2G5P39877 138 aa2.56□□□□□ -2
VIM-210ENST00000637053 CDKN2BP42772 138 aa2.56□□□□□ -2
VIM-210ENST00000637053 PGFP49763 221 aa2.56□□□□□ -2
VIM-210ENST00000637053 HCCSP53701 268 aa2.56□□□□□ -2
VIM-210ENST00000637053 TAS2R38P59533 333 aa2.56□□□□□ -2
VIM-210ENST00000637053 TAS2R43P59537 309 aa2.56□□□□□ -2
VIM-210ENST00000637053 ISL1P61371 349 aa2.56□□□□□ -2
VIM-210ENST00000637053 CDKL1Q00532 357 aa2.56□□□□□ -2
VIM-210ENST00000637053 CDK5Q00535 292 aa2.56□□□□□ -2
VIM-210ENST00000637053 TGFBR3Q03167 851 aa2.56□□□□□ -2
VIM-210ENST00000637053 RGS1Q08116 209 aa2.56□□□□□ -2
VIM-210ENST00000637053 FOXI1Q12951 378 aa2.56□□□□□ -2
VIM-210ENST00000637053 MFAP5Q13361 173 aa2.56□□□□□ -2
VIM-210ENST00000637053 PPP1R1AQ13522 171 aa2.56□□□□□ -2
VIM-210ENST00000637053 GTF2H2Q13888 395 aa2.56□□□□□ -2
VIM-210ENST00000637053 FASTKQ14296 549 aaKnown RBP2.56□□□□□ -2
VIM-210ENST00000637053 GGTLC2Q14390 218 aa2.56□□□□□ -2
VIM-210ENST00000637053 ZNF234Q14588 700 aa2.56□□□□□ -2
VIM-210ENST00000637053 GINS1Q14691 196 aa2.56□□□□□ -2
VIM-210ENST00000637053 KIR2DS5Q14953 304 aa2.56□□□□□ -2
VIM-210ENST00000637053 TAF9Q16594 264 aa2.56□□□□□ -2
VIM-210ENST00000637053 DUSP6Q16828 381 aa2.56□□□□□ -2
VIM-210ENST00000637053 PHLDA2Q53GA4 152 aa2.56□□□□□ -2
VIM-210ENST00000637053 RAB6CQ53S08 254 aa2.56□□□□□ -2
VIM-210ENST00000637053 TMEM215Q68D42 235 aa2.56□□□□□ -2
VIM-210ENST00000637053 HBMQ6B0K9 141 aa2.56□□□□□ -2
VIM-210ENST00000637053 STEAP1BQ6NZ63 245 aa2.56□□□□□ -2
VIM-210ENST00000637053 GTF2H2CQ6P1K8 395 aa2.56□□□□□ -2
VIM-210ENST00000637053 TOMM20LQ6UXN7 152 aa2.56□□□□□ -2
VIM-210ENST00000637053 FRRS1Q6ZNA5 592 aa2.56□□□□□ -2
VIM-210ENST00000637053 Q6ZRG5 221 aa2.56□□□□□ -2
VIM-210ENST00000637053 PIWIL4Q7Z3Z4 852 aaKnown RBP2.56□□□□□ -2
VIM-210ENST00000637053 SERPINA11Q86U17 422 aa2.56□□□□□ -2
VIM-210ENST00000637053 C17orf64Q86WR6 236 aa2.56□□□□□ -2
VIM-210ENST00000637053 VKORC1L1Q8N0U8 176 aa2.56□□□□□ -2
VIM-210ENST00000637053 CA13Q8N1Q1 262 aa2.56□□□□□ -2
VIM-210ENST00000637053 EID2Q8N6I1 236 aa2.56□□□□□ -2
VIM-210ENST00000637053 KLHDC1Q8N7A1 406 aa2.56□□□□□ -2
VIM-210ENST00000637053 GATD1Q8NB37 220 aa2.56□□□□□ -2
VIM-210ENST00000637053 OR8G5Q8NG78 346 aa2.56□□□□□ -2
VIM-210ENST00000637053 OR13J1Q8NGT2 312 aa2.56□□□□□ -2
VIM-210ENST00000637053 FGFBP3Q8TAT2 258 aa2.56□□□□□ -2
VIM-210ENST00000637053 CD99L2Q8TCZ2 262 aa2.56□□□□□ -2
VIM-210ENST00000637053 GPR148Q8TDV2 347 aa2.56□□□□□ -2
VIM-210ENST00000637053 NPRL2Q8WTW4 380 aa2.56□□□□□ -2
VIM-210ENST00000637053 RND1Q92730 232 aa2.56□□□□□ -2
VIM-210ENST00000637053 IL22RA2Q969J5 263 aa2.56□□□□□ -2
VIM-210ENST00000637053 TMEM125Q96AQ2 219 aa2.56□□□□□ -2
VIM-210ENST00000637053 RPUSD4Q96CM3 377 aaKnown RBP2.56□□□□□ -2
VIM-210ENST00000637053 RCN3Q96D15 328 aa2.56□□□□□ -2
VIM-210ENST00000637053 CMTM7Q96FZ5 175 aa2.56□□□□□ -2
VIM-210ENST00000637053 NARS2Q96I59 477 aaKnown RBP2.56□□□□□ -2
VIM-210ENST00000637053 DNAJC30Q96LL9 226 aa2.56□□□□□ -2
VIM-210ENST00000637053 Q96MF0 132 aa2.56□□□□□ -2
VIM-210ENST00000637053 ZNF681Q96N22 645 aa2.56□□□□□ -2
VIM-210ENST00000637053 OR2M2Q96R28 347 aa2.56□□□□□ -2
VIM-210ENST00000637053 APOOQ9BUR5 198 aa2.56□□□□□ -2
VIM-210ENST00000637053 C1orf50Q9BV19 199 aa2.56□□□□□ -2
VIM-210ENST00000637053 TAPBPLQ9BX59 468 aa2.56□□□□□ -2
VIM-210ENST00000637053 RSPO3Q9BXY4 272 aaPredicted RBP2.56□□□□□ -2
VIM-210ENST00000637053 RAB6CQ9H0N0 254 aa2.56□□□□□ -2
VIM-210ENST00000637053 ABCG5Q9H222 651 aa2.56□□□□□ -2
VIM-210ENST00000637053 MS4A6AQ9H2W1 248 aa2.56□□□□□ -2
VIM-210ENST00000637053 OR51I1Q9H343 314 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms