RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 WDFY4Q6ZS81 3184 aa19.29■□□□□ 0.68
PNKP-220ENST00000627232 CNTRLQ7Z7A1 2325 aa19.28■□□□□ 0.68
PNKP-220ENST00000627232 MELTFP08582 738 aa19.28■□□□□ 0.68
PNKP-220ENST00000627232 MMP7P09237 267 aaPredicted RBP19.28■□□□□ 0.68
PNKP-220ENST00000627232 ALDH3B1P43353 468 aa19.28■□□□□ 0.68
PNKP-220ENST00000627232 HTR5AP47898 357 aa19.28■□□□□ 0.68
PNKP-220ENST00000627232 TNFSF10P50591 281 aa19.28■□□□□ 0.68
PNKP-220ENST00000627232 RBMS2Q15434 407 aaKnown RBP19.28■□□□□ 0.68
PNKP-220ENST00000627232 ST3GAL2Q16842 350 aa19.28■□□□□ 0.68
PNKP-220ENST00000627232 SNAI3Q3KNW1 292 aa19.28■□□□□ 0.68
PNKP-220ENST00000627232 METTL11BQ5VVY1 283 aa19.28■□□□□ 0.68
PNKP-220ENST00000627232 ZNF101Q8IZC7 436 aa19.28■□□□□ 0.68
PNKP-220ENST00000627232 PNLDC1Q8NA58 520 aaKnown RBP19.28■□□□□ 0.68
PNKP-220ENST00000627232 FNDC9Q8TBE3 224 aa19.28■□□□□ 0.68
PNKP-220ENST00000627232 ITFG2Q969R8 447 aa19.28■□□□□ 0.68
PNKP-220ENST00000627232 MED30Q96HR3 178 aa19.28■□□□□ 0.68
PNKP-220ENST00000627232 GAL3ST1Q99999 423 aa19.28■□□□□ 0.68
PNKP-220ENST00000627232 OR10A4Q9H209 315 aa19.28■□□□□ 0.68
PNKP-220ENST00000627232 SLC7A10Q9NS82 523 aa19.28■□□□□ 0.68
PNKP-220ENST00000627232 PIGLQ9Y2B2 252 aa19.28■□□□□ 0.68
PNKP-220ENST00000627232 TNFRSF10AO00220 468 aa19.27■□□□□ 0.68
PNKP-220ENST00000627232 ARPC1BO15143 372 aaKnown RBP19.27■□□□□ 0.68
PNKP-220ENST00000627232 IL5P05113 134 aa19.27■□□□□ 0.68
PNKP-220ENST00000627232 CPN1P15169 458 aa19.27■□□□□ 0.68
PNKP-220ENST00000627232 ERP29P30040 261 aaKnown RBP19.27■□□□□ 0.68
PNKP-220ENST00000627232 MRPS15P82914 257 aaKnown RBP19.27■□□□□ 0.68
PNKP-220ENST00000627232 FAAP20Q6NZ36 180 aa19.27■□□□□ 0.68
PNKP-220ENST00000627232 STEAP1BQ6NZ63 245 aa19.27■□□□□ 0.68
PNKP-220ENST00000627232 ZNF782Q6ZMW2 699 aaPredicted RBP19.27■□□□□ 0.68
PNKP-220ENST00000627232 CHMP1BQ7LBR1 199 aa19.27■□□□□ 0.68
PNKP-220ENST00000627232 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.27■□□□□ 0.68
PNKP-220ENST00000627232 GABRG1Q8N1C3 465 aa19.27■□□□□ 0.68
PNKP-220ENST00000627232 AKR7LQ8NHP1 331 aa19.27■□□□□ 0.68
PNKP-220ENST00000627232 GPER1Q99527 375 aa19.27■□□□□ 0.68
PNKP-220ENST00000627232 RGCCQ9H4X1 137 aa19.27■□□□□ 0.68
PNKP-220ENST00000627232 ZDHHC11Q9H8X9 412 aa19.27■□□□□ 0.68
PNKP-220ENST00000627232 FLVCR2Q9UPI3 526 aa19.27■□□□□ 0.68
PNKP-220ENST00000627232 LIPGQ9Y5X9 500 aa19.27■□□□□ 0.68
PNKP-220ENST00000627232 TRGV5A0A0B4J1U4 118 aa19.26■□□□□ 0.67
PNKP-220ENST00000627232 MEIS3P1A6NDR6 274 aa19.26■□□□□ 0.67
PNKP-220ENST00000627232 ZNF587BE7ETH6 402 aa19.26■□□□□ 0.67
PNKP-220ENST00000627232 CEACAM1P13688 526 aa19.26■□□□□ 0.67
PNKP-220ENST00000627232 FAHP16930 419 aa19.26■□□□□ 0.67
PNKP-220ENST00000627232 OR3A4PP47883 348 aa19.26■□□□□ 0.67
PNKP-220ENST00000627232 VEGFCP49767 419 aa19.26■□□□□ 0.67
PNKP-220ENST00000627232 SFRP5Q5T4F7 317 aa19.26■□□□□ 0.67
PNKP-220ENST00000627232 IGFL2Q6UWQ7 119 aa19.26■□□□□ 0.67
PNKP-220ENST00000627232 TMPRSS7Q7RTY8 843 aa19.26■□□□□ 0.67
PNKP-220ENST00000627232 SEMA6DQ8NFY4 1073 aa19.26■□□□□ 0.67
PNKP-220ENST00000627232 OR10R2Q8NGX6 335 aa19.26■□□□□ 0.67
PNKP-220ENST00000627232 FGFBP3Q8TAT2 258 aa19.26■□□□□ 0.67
PNKP-220ENST00000627232 SPACA5Q96QH8 159 aa19.26■□□□□ 0.67
PNKP-220ENST00000627232 LDAHQ9H6V9 325 aa19.26■□□□□ 0.67
PNKP-220ENST00000627232 CALHM2Q9HA72 323 aa19.26■□□□□ 0.67
PNKP-220ENST00000627232 WIPF3A6NGB9 483 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 SULT1A3P0DMM9 295 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 SULT1A4P0DMN0 295 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 RCVRNP35243 200 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 GZMKP49863 264 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 ARF1P84077 181 aaKnown RBP19.25■□□□□ 0.67
PNKP-220ENST00000627232 HGFACQ04756 655 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 KISS1Q15726 138 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 UBE2V2Q15819 145 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 GLDNQ6ZMI3 551 aaPredicted RBP19.25■□□□□ 0.67
PNKP-220ENST00000627232 Q6ZTK2 550 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 RNF144BQ7Z419 303 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 MCEMP1Q8IX19 187 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 OR11H7Q8NGC8 314 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 APH1AQ96BI3 265 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 WDYHV1Q96HA8 205 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 REEP6Q96HR9 211 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 LPAR5Q9H1C0 372 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 DEFB127Q9H1M4 99 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 FAM86C1Q9NVL1 165 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 TMEM235A6NFC5 223 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 CDC14BO60729 498 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 LCATP04180 440 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 CD74P04233 296 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 CD3DP04234 171 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 PATE4P0C8F1 98 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 CDNFQ49AH0 187 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 PIAS4Q8N2W9 510 aaPredicted RBP19.25■□□□□ 0.67
PNKP-220ENST00000627232 CAPSLQ8WWF8 208 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 DACT3Q96B18 629 aaPredicted RBP19.25■□□□□ 0.67
PNKP-220ENST00000627232 GPN1Q9HCN4 374 aaPredicted RBP19.25■□□□□ 0.67
PNKP-220ENST00000627232 GP6Q9HCN6 339 aa19.25■□□□□ 0.67
PNKP-220ENST00000627232 CYB5AP00167 134 aa19.24■□□□□ 0.67
PNKP-220ENST00000627232 NAT2P11245 290 aa19.24■□□□□ 0.67
PNKP-220ENST00000627232 ZNF24P17028 368 aa19.24■□□□□ 0.67
PNKP-220ENST00000627232 CCL11P51671 97 aa19.24■□□□□ 0.67
PNKP-220ENST00000627232 RIPPLY1Q0D2K3 151 aa19.24■□□□□ 0.67
PNKP-220ENST00000627232 SRSF6Q13247 344 aaKnown RBP19.24■□□□□ 0.67
PNKP-220ENST00000627232 RNFT1Q5M7Z0 435 aa19.24■□□□□ 0.67
PNKP-220ENST00000627232 CRIP3Q6Q6R5 217 aa19.24■□□□□ 0.67
PNKP-220ENST00000627232 ZNF100Q8IYN0 542 aa19.24■□□□□ 0.67
PNKP-220ENST00000627232 CHST4Q8NCG5 386 aa19.24■□□□□ 0.67
PNKP-220ENST00000627232 OR4D10Q8NGI6 311 aa19.24■□□□□ 0.67
PNKP-220ENST00000627232 URM1Q9BTM9 101 aaKnown RBP19.24■□□□□ 0.67
PNKP-220ENST00000627232 TMEM59Q9BXS4 323 aa19.24■□□□□ 0.67
PNKP-220ENST00000627232 NPDC1Q9NQX5 325 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms