RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 SOSTQ9BQB4 213 aa11.9□□□□□ -0.5
TMEM254-213ENST00000613758 NPAP1Q9NZP6 1156 aa11.9□□□□□ -0.5
TMEM254-213ENST00000613758 STARD10Q9Y365 291 aa11.9□□□□□ -0.5
TMEM254-213ENST00000613758 TRAV8-7A0A075B6U6 113 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 XRCC2O43543 280 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 RAF1P04049 648 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 XKRXQ6PP77 449 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 SSX8Q7RTT4 187 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 ZNF101Q8IZC7 436 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 PLPP7Q8NBV4 271 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 THRSPQ92748 146 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 TMEM106AQ96A25 262 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 ZC3HAV1LQ96H79 300 aaKnown RBP11.89□□□□□ -0.51
TMEM254-213ENST00000613758 REEP6Q96HR9 211 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 DIRAS2Q96HU8 199 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 WFIKKN1Q96NZ8 548 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 RGCCQ9H4X1 137 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 TBCCD1Q9NVR7 557 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 LMX1BO60663 402 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 PAHP00439 452 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 CD2P06729 351 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 ZNF35P13682 527 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 AGAP20933 346 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 EVX1P49640 407 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 ZNF92Q03936 586 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 MALLQ13021 153 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 WFDC8Q8IUA0 241 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 LYSMD2Q8IV50 215 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 ITLN2Q8WWU7 325 aaPredicted RBP11.89□□□□□ -0.51
TMEM254-213ENST00000613758 SRRQ9GZT4 340 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 OR51B6Q9H340 312 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 ABCB10Q9NRK6 738 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 ZNF275Q9NSD4 429 aaPredicted RBP11.89□□□□□ -0.51
TMEM254-213ENST00000613758 ZNF391Q9UJN7 358 aa11.89□□□□□ -0.51
TMEM254-213ENST00000613758 IGHV2OR16-5A0A0B4J2B6 119 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 ICMTO60725 284 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 THBDP07204 575 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 ZNF12P17014 697 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 GRNP28799 593 aaKnown RBP11.88□□□□□ -0.51
TMEM254-213ENST00000613758 NAAAQ02083 359 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 ZNF181Q2M3W8 571 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 CNIH2Q6PI25 160 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 SEZ6L2Q6UXD5 910 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 OR5L1Q8NGL2 311 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 OR5H6Q8NGV6 325 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 OR14K1Q8NGZ2 314 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 AKAP1Q92667 903 aaKnown RBP eCLIP11.88□□□□□ -0.51
TMEM254-213ENST00000613758 FGGYQ96C11 551 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 PRR14LQ5THK1 2151 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 DIDO1Q9BTC0 2240 aaKnown RBP11.88□□□□□ -0.51
TMEM254-213ENST00000613758 A0A0B4J203 849 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 PDCD5O14737 125 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 MTRF1O75570 445 aaKnown RBP11.88□□□□□ -0.51
TMEM254-213ENST00000613758 DHRS3O75911 302 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 CLDN14O95500 239 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 FAM157BP0CG42 384 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 ELK1P19419 428 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 UCP2P55851 309 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 STEAP3Q658P3 488 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 Q6ZNX1 250 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 Q6ZSR3 168 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 RFPL4BQ6ZWI9 263 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 ZNF808Q8N4W9 903 aaPredicted RBP11.88□□□□□ -0.51
TMEM254-213ENST00000613758 CCDC54Q8NEL0 328 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 TRMT10AQ8TBZ6 339 aaKnown RBP11.88□□□□□ -0.51
TMEM254-213ENST00000613758 CHPT1Q8WUD6 406 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 SPSB4Q96A44 273 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 TCF7L1Q9HCS4 588 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 PTTG3PQ9NZH4 202 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 V9GYS6 101 aa11.88□□□□□ -0.51
TMEM254-213ENST00000613758 CFAP46Q8IYW2 2715 aa11.87□□□□□ -0.51
TMEM254-213ENST00000613758 LOC390937A0A1W2PQ73 354 aa11.87□□□□□ -0.51
TMEM254-213ENST00000613758 FABP12A6NFH5 140 aa11.87□□□□□ -0.51
TMEM254-213ENST00000613758 J3QW42 95 aa11.87□□□□□ -0.51
TMEM254-213ENST00000613758 SMPD2O60906 423 aa11.87□□□□□ -0.51
TMEM254-213ENST00000613758 EIF4EP06730 217 aaKnown RBP11.87□□□□□ -0.51
TMEM254-213ENST00000613758 CALCRP30988 508 aa11.87□□□□□ -0.51
TMEM254-213ENST00000613758 SNTB1Q13884 538 aaKnown RBP11.87□□□□□ -0.51
TMEM254-213ENST00000613758 FAM131AQ6UXB0 335 aa11.87□□□□□ -0.51
TMEM254-213ENST00000613758 ADAT3Q96EY9 351 aaPredicted RBP11.87□□□□□ -0.51
TMEM254-213ENST00000613758 CCDC32Q9BV29 185 aa11.87□□□□□ -0.51
TMEM254-213ENST00000613758 REPIN1Q9BWE0 567 aaKnown RBP11.87□□□□□ -0.51
TMEM254-213ENST00000613758 POFUT1Q9H488 388 aa11.87□□□□□ -0.51
TMEM254-213ENST00000613758 PPP1R3EQ9H7J1 279 aa11.87□□□□□ -0.51
TMEM254-213ENST00000613758 ABRACLQ9P1F3 81 aa11.87□□□□□ -0.51
TMEM254-213ENST00000613758 NDRG3Q9UGV2 375 aa11.87□□□□□ -0.51
TMEM254-213ENST00000613758 V9GY05 133 aa11.87□□□□□ -0.51
TMEM254-213ENST00000613758 HIVEP3Q5T1R4 2406 aa11.87□□□□□ -0.51
TMEM254-213ENST00000613758 A6NIN4 97 aa11.86□□□□□ -0.51
TMEM254-213ENST00000613758 IFITM5A6NNB3 132 aa11.86□□□□□ -0.51
TMEM254-213ENST00000613758 SNRPBP14678 240 aaKnown RBP11.86□□□□□ -0.51
TMEM254-213ENST00000613758 ZNF20P17024 532 aa11.86□□□□□ -0.51
TMEM254-213ENST00000613758 IGFBP3P17936 291 aaPredicted RBP11.86□□□□□ -0.51
TMEM254-213ENST00000613758 RAD52P43351 418 aa11.86□□□□□ -0.51
TMEM254-213ENST00000613758 GSK3AP49840 483 aa11.86□□□□□ -0.51
TMEM254-213ENST00000613758 PPP1CBP62140 327 aa11.86□□□□□ -0.51
TMEM254-213ENST00000613758 FAM3AP98173 230 aa11.86□□□□□ -0.51
TMEM254-213ENST00000613758 SORDQ00796 357 aa11.86□□□□□ -0.51
TMEM254-213ENST00000613758 TFF3Q07654 80 aa11.86□□□□□ -0.51
TMEM254-213ENST00000613758 MADCAM1Q13477 382 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms