RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, human

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBE1-208	ENST00000604743	OR8S1	Q8NH09	359 aa		12.11	□□□□□ -0.47
TUBE1-208	ENST00000604743	TBX5	Q99593	518 aa		12.11	□□□□□ -0.47
TUBE1-208	ENST00000604743	NIPAL2	Q9H841	368 aa		12.11	□□□□□ -0.47
TUBE1-208	ENST00000604743	PATZ1	Q9HBE1	687 aa	Known RBP	12.11	□□□□□ -0.47
TUBE1-208	ENST00000604743	ADGRL4	Q9HBW9	690 aa		12.11	□□□□□ -0.47
TUBE1-208	ENST00000604743	S100A14	Q9HCY8	104 aa		12.11	□□□□□ -0.47
TUBE1-208	ENST00000604743	GTF2A1L	Q9UNN4	478 aa		12.11	□□□□□ -0.47
TUBE1-208	ENST00000604743	TMEM14A	Q9Y6G1	99 aa		12.11	□□□□□ -0.47
TUBE1-208	ENST00000604743	MXRA5	Q9NR99	2828 aa		12.11	□□□□□ -0.47
TUBE1-208	ENST00000604743	PPIAL4E	A0A075B759	164 aa		12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	TMEM269	A0A1B0GVZ9	245 aa		12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	ZNF670-ZNF695	F2Z2N8	137 aa		12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	PPIAL4D	F5H284	164 aa		12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	APOL3	O95236	402 aa		12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	PNP	P00491	289 aa		12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	ALPL	P05186	524 aa		12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	PPIAL4F	P0DN26	164 aa		12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	CFL1	P23528	166 aa	Known RBP	12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	GATA4	P43694	442 aa		12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	CDC42	P60953	191 aa		12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	SEC61A1	P61619	476 aa	Known RBP	12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	GABPB1	Q06547	395 aa	Predicted RBP	12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	DCAF12L2	Q5VW00	463 aa		12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	COMMD2	Q86X83	199 aa		12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	CBR4	Q8N4T8	237 aa		12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	DEFB108B	Q8NET1	73 aa		12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	FAM81A	Q8TBF8	368 aa		12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	LYZL4	Q96KX0	146 aa		12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	OR8B4	Q96RC9	309 aa		12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	APOL4	Q9BPW4	351 aa		12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	PAPOLG	Q9BWT3	736 aa	Known RBP	12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	RGCC	Q9H4X1	137 aa		12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	PPP1R3E	Q9H7J1	279 aa		12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	FN3KRP	Q9HA64	309 aa		12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	TMEM165	Q9HC07	324 aa		12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	C1orf123	Q9NWV4	160 aa		12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	RHBDD3	Q9Y3P4	386 aa		12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	PPIAL4A	Q9Y536	164 aa		12.1	□□□□□ -0.47
TUBE1-208	ENST00000604743	ATR	Q13535	2644 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743		A0A0G2JMP0	313 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743		A0A0X1KG70	313 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	hCG_1807616	A0A1W2PRN6	198 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	CEACAM18	A8MTB9	384 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	FOXH1	O75593	365 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	BAG2	O95816	211 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	RPS2	P15880	293 aa	Known RBP	12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	ZFP36	P26651	326 aa	Known RBP	12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	ATP6V1E1	P36543	226 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	GNAL	P38405	381 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	ALDH3A2	P51648	485 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	RIDA	P52758	137 aa	Known RBP	12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	MZT1	Q08AG7	82 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	ZNF181	Q2M3W8	571 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	DEGS2	Q6QHC5	323 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	ZNF322	Q6U7Q0	402 aa	Predicted RBP	12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	PLEKHG7	Q6ZR37	379 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	ZNF826P	Q6ZT77	177 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	ZNF679	Q8IYX0	411 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	SPERT	Q8NA61	448 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	CSNK2A3	Q8NEV1	391 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	OR4M2	Q8NGB6	313 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	OR8J1	Q8NGP2	316 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743		Q8TCH9	128 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	ASB17	Q8WXJ9	295 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	PIGC	Q92535	297 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	UBE2F	Q969M7	185 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	ERGIC1	Q969X5	290 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	PPP1R14A	Q96A00	147 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	TMEM246	Q9BRR3	403 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	G6PC2	Q9NQR9	355 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	C14orf119	Q9NWQ9	140 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	IMPAD1	Q9NX62	359 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	USE1	Q9NZ43	259 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	RNF7	Q9UBF6	113 aa		12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	WARS2	Q9UGM6	360 aa	Known RBP	12.09	□□□□□ -0.47
TUBE1-208	ENST00000604743	LOC105371242	A0A075B767	164 aa		12.08	□□□□□ -0.48
TUBE1-208	ENST00000604743	ZNF850	A8MQ14	1090 aa		12.08	□□□□□ -0.48
TUBE1-208	ENST00000604743	PHYH	O14832	338 aa		12.08	□□□□□ -0.48
TUBE1-208	ENST00000604743	PHF1	O43189	567 aa	Predicted RBP	12.08	□□□□□ -0.48
TUBE1-208	ENST00000604743	ZNF254	O75437	659 aa		12.08	□□□□□ -0.48
TUBE1-208	ENST00000604743	ACKR3	P25106	362 aa		12.08	□□□□□ -0.48
TUBE1-208	ENST00000604743	CD80	P33681	288 aa		12.08	□□□□□ -0.48
TUBE1-208	ENST00000604743	ZNF829	Q3KNS6	432 aa	Predicted RBP	12.08	□□□□□ -0.48
TUBE1-208	ENST00000604743	ESCO2	Q56NI9	601 aa		12.08	□□□□□ -0.48
TUBE1-208	ENST00000604743	SFRP4	Q6FHJ7	346 aa	Predicted RBP	12.08	□□□□□ -0.48
TUBE1-208	ENST00000604743	KLB	Q86Z14	1044 aa		12.08	□□□□□ -0.48
TUBE1-208	ENST00000604743	EME1	Q96AY2	570 aa		12.08	□□□□□ -0.48
TUBE1-208	ENST00000604743	MDFI	Q99750	246 aa		12.08	□□□□□ -0.48
TUBE1-208	ENST00000604743	C9orf16	Q9BUW7	83 aa		12.08	□□□□□ -0.48
TUBE1-208	ENST00000604743	PBOV1	Q9GZY1	135 aa		12.08	□□□□□ -0.48
TUBE1-208	ENST00000604743	METTL17	Q9H7H0	456 aa	Predicted RBP	12.08	□□□□□ -0.48
TUBE1-208	ENST00000604743	CLN6	Q9NWW5	311 aa		12.08	□□□□□ -0.48
TUBE1-208	ENST00000604743	FAM206A	Q9NX38	181 aa		12.08	□□□□□ -0.48
TUBE1-208	ENST00000604743	C3orf80	F5H4A9	247 aa		12.07	□□□□□ -0.48
TUBE1-208	ENST00000604743	RPP14	O95059	124 aa	Known RBP	12.07	□□□□□ -0.48
TUBE1-208	ENST00000604743	AVP	P01185	164 aa		12.07	□□□□□ -0.48
TUBE1-208	ENST00000604743	WNT2	P09544	360 aa		12.07	□□□□□ -0.48
TUBE1-208	ENST00000604743	ADRA2C	P18825	462 aa		12.07	□□□□□ -0.48
TUBE1-208	ENST00000604743	HTR1F	P30939	366 aa		12.07	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms