RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 FAM166BA8MTA8 275 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 DEFB103AP81534 67 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 SLC17A1Q14916 467 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 HSPB2Q16082 182 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 ACSM5Q6NUN0 579 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 TMEM207Q6UWW9 146 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 R4GMQ9 66 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 NCBP2LA6PVI3 153 aaKnown RBP8.72□□□□□ -1.01
CSMD1-217ENST00000602723 QDPRP09417 244 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 LIMS3P0CW19 117 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 LIMS4P0CW20 117 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 OR1D5P58170 312 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 IL10RAQ13651 578 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 OR2M7Q8NG81 312 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 SMIM4Q8WVI0 70 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 SLC25A4P12235 298 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 DIO1P49895 249 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 FA2HQ7L5A8 372 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 ZNF687Q8N1G0 1237 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 NXF2Q9GZY0 626 aaKnown RBP8.72□□□□□ -1.01
CSMD1-217ENST00000602723 ZNF749O43361 778 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 USP51Q70EK9 711 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 SLCO4A1Q96BD0 722 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 MMP26Q9NRE1 261 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 DHCR7Q9UBM7 475 aaKnown RBP8.72□□□□□ -1.01
CSMD1-217ENST00000602723 VAMP5O95183 116 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 NQO2P16083 231 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 SHHQ15465 462 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 ATF6BQ99941 703 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 KIR3DX1Q9H7L2 352 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 RHOFQ9HBH0 211 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 MMP7P09237 267 aaPredicted RBP8.72□□□□□ -1.01
CSMD1-217ENST00000602723 GPNMBQ14956 572 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 TMEM183BQ1AE95 376 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 DRAM2Q6UX65 266 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 STAC2Q6ZMT1 411 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 LSRQ86X29 649 aaPredicted RBP8.72□□□□□ -1.01
CSMD1-217ENST00000602723 ZDHHC23Q8IYP9 409 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 GALNT16Q8N428 558 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 LILRA3Q8N6C8 439 aaPredicted RBP8.72□□□□□ -1.01
CSMD1-217ENST00000602723 ARRDC3Q96B67 414 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 FER1L6-AS2Q96M78 137 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 TAAR6Q96RI8 345 aa8.72□□□□□ -1.01
CSMD1-217ENST00000602723 PMCHP20382 165 aa8.71□□□□□ -1.01
CSMD1-217ENST00000602723 CCSMST1Q4G0I0 132 aa8.71□□□□□ -1.01
CSMD1-217ENST00000602723 SLC16A12Q6ZSM3 486 aa8.71□□□□□ -1.01
CSMD1-217ENST00000602723 P2RY12Q9H244 342 aa8.71□□□□□ -1.01
CSMD1-217ENST00000602723 MRPS2Q9Y399 296 aaKnown RBP8.71□□□□□ -1.01
CSMD1-217ENST00000602723 DNAJC25-GNG10A0A024R161 153 aa8.71□□□□□ -1.01
CSMD1-217ENST00000602723 FAM221AA4D161 298 aa8.71□□□□□ -1.01
CSMD1-217ENST00000602723 H3BNC9 293 aa8.71□□□□□ -1.01
CSMD1-217ENST00000602723 DSCR3O14972 297 aa8.71□□□□□ -1.01
CSMD1-217ENST00000602723 SLC19A1P41440 591 aa8.71□□□□□ -1.01
CSMD1-217ENST00000602723 MLF2Q15773 248 aaPredicted RBP8.71□□□□□ -1.01
CSMD1-217ENST00000602723 FAM26DQ5JW98 314 aa8.71□□□□□ -1.01
CSMD1-217ENST00000602723 ARHGEF39Q8N4T4 335 aa8.71□□□□□ -1.01
CSMD1-217ENST00000602723 OR52B4Q8NGK2 314 aa8.71□□□□□ -1.01
CSMD1-217ENST00000602723 PTPRFP10586 1907 aa8.71□□□□□ -1.01
CSMD1-217ENST00000602723 OR2J3O76001 311 aa8.71□□□□□ -1.01
CSMD1-217ENST00000602723 EPXP11678 715 aa8.71□□□□□ -1.01
CSMD1-217ENST00000602723 GPM6AP51674 278 aa8.71□□□□□ -1.01
CSMD1-217ENST00000602723 DHODHQ02127 395 aa8.71□□□□□ -1.01
CSMD1-217ENST00000602723 KLHDC9Q8NEP7 349 aa8.71□□□□□ -1.01
CSMD1-217ENST00000602723 IFI44Q8TCB0 444 aa8.71□□□□□ -1.01
CSMD1-217ENST00000602723 NUDT8Q8WV74 236 aa8.71□□□□□ -1.01
CSMD1-217ENST00000602723 PDXPQ96GD0 296 aa8.71□□□□□ -1.01
CSMD1-217ENST00000602723 PRSS37A4D1T9 235 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 K7ESM1 405 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 YKT6O15498 198 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 RNASEKQ6P5S7 137 aaKnown RBP8.71□□□□□ -1.02
CSMD1-217ENST00000602723 PBOV1Q9GZY1 135 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 TRIB1Q96RU8 372 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 TIMM9Q9Y5J7 89 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 LRRC3CA6NJW4 275 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 RNASEK-C17orf49H0YIS7 233 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 CYC1P08574 325 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 CLN3Q13286 438 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 CDK5R1Q15078 307 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 MIDNQ504T8 468 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 ZNF429Q86V71 674 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 AKR7LQ8NHP1 331 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 TECTBQ96PL2 329 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 ISG20L2Q9H9L3 353 aaKnown RBP8.71□□□□□ -1.02
CSMD1-217ENST00000602723 GDF2Q9UK05 429 aaPredicted RBP8.71□□□□□ -1.02
CSMD1-217ENST00000602723 A0A096LPE4 126 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 TEX50A0A1B0GTY4 177 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 A0A1W2PPZ6 126 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 A0A1W2PR48 441 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 NKAIN1Q4KMZ8 207 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 TMEM97Q5BJF2 176 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 SDF2Q99470 211 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 IFT22Q9H7X7 185 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 PLSCR3Q9NRY6 295 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 RCL1Q9Y2P8 373 aaKnown RBP8.71□□□□□ -1.02
CSMD1-217ENST00000602723 TRAV1-2A0A0B4J238 106 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 ICOSLGO75144 302 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 SPNP16150 400 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 CLEC12BQ2HXU8 276 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 SYS1Q8N2H4 156 aa8.71□□□□□ -1.02
CSMD1-217ENST00000602723 SULT1A3P0DMM9 295 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms