RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 CCL8P80075 99 aa16.44■□□□□ 0.22
UPF1-209ENST00000600310 TSTQ16762 297 aaKnown RBP16.44■□□□□ 0.22
UPF1-209ENST00000600310 TMPRSS11AQ6ZMR5 421 aa16.44■□□□□ 0.22
UPF1-209ENST00000600310 DNM1P46Q6ZS02 220 aa16.44■□□□□ 0.22
UPF1-209ENST00000600310 PRSS35Q8N3Z0 413 aa16.44■□□□□ 0.22
UPF1-209ENST00000600310 CSNK2A3Q8NEV1 391 aa16.44■□□□□ 0.22
UPF1-209ENST00000600310 OR2Z1Q8NG97 314 aa16.44■□□□□ 0.22
UPF1-209ENST00000600310 HAVCR2Q8TDQ0 301 aa16.44■□□□□ 0.22
UPF1-209ENST00000600310 UBASH3BQ8TF42 649 aa16.44■□□□□ 0.22
UPF1-209ENST00000600310 ELMOD3Q96FG2 381 aa16.44■□□□□ 0.22
UPF1-209ENST00000600310 MYOZ1Q9NP98 299 aaPredicted RBP16.44■□□□□ 0.22
UPF1-209ENST00000600310 CLEC2DQ9UHP7 191 aa16.44■□□□□ 0.22
UPF1-209ENST00000600310 TPRKBQ9Y3C4 175 aa16.44■□□□□ 0.22
UPF1-209ENST00000600310 PCDHGB5Q9Y5G0 923 aa16.44■□□□□ 0.22
UPF1-209ENST00000600310 PRRC2AP48634 2157 aaKnown RBP16.44■□□□□ 0.22
UPF1-209ENST00000600310 A0A1B0GTI1 187 aa16.43■□□□□ 0.22
UPF1-209ENST00000600310 LOC390937A0A1W2PQ73 354 aa16.43■□□□□ 0.22
UPF1-209ENST00000600310 PTGES3LE9PB15 166 aa16.43■□□□□ 0.22
UPF1-209ENST00000600310 MLNRO43193 412 aa16.43■□□□□ 0.22
UPF1-209ENST00000600310 CDK1P06493 297 aa16.43■□□□□ 0.22
UPF1-209ENST00000600310 HTR1AP08908 422 aa16.43■□□□□ 0.22
UPF1-209ENST00000600310 DAOP14920 347 aa16.43■□□□□ 0.22
UPF1-209ENST00000600310 TNFSF4P23510 183 aa16.43■□□□□ 0.22
UPF1-209ENST00000600310 C21orf33P30042 268 aaPredicted RBP16.43■□□□□ 0.22
UPF1-209ENST00000600310 KIR3DL2P43630 455 aa16.43■□□□□ 0.22
UPF1-209ENST00000600310 CCR9P51686 369 aa16.43■□□□□ 0.22
UPF1-209ENST00000600310 GBX2P52951 348 aaPredicted RBP16.43■□□□□ 0.22
UPF1-209ENST00000600310 MRPS11P82912 194 aaKnown RBP16.43■□□□□ 0.22
UPF1-209ENST00000600310 TNFAIP6P98066 277 aaPredicted RBP16.43■□□□□ 0.22
UPF1-209ENST00000600310 CLEC12BQ2HXU8 276 aa16.43■□□□□ 0.22
UPF1-209ENST00000600310 OR2G6Q5TZ20 316 aa16.43■□□□□ 0.22
UPF1-209ENST00000600310 Q6ZSR3 168 aa16.43■□□□□ 0.22
UPF1-209ENST00000600310 COMMD2Q86X83 199 aa16.43■□□□□ 0.22
UPF1-209ENST00000600310 KLHL36Q8N4N3 616 aa16.43■□□□□ 0.22
UPF1-209ENST00000600310 PLPP7Q8NBV4 271 aa16.43■□□□□ 0.22
UPF1-209ENST00000600310 OR52N1Q8NH53 320 aa16.43■□□□□ 0.22
UPF1-209ENST00000600310 MYDGFQ969H8 173 aa16.43■□□□□ 0.22
UPF1-209ENST00000600310 EGLN1Q9GZT9 426 aa16.43■□□□□ 0.22
UPF1-209ENST00000600310 DUSP21Q9H596 190 aa16.43■□□□□ 0.22
UPF1-209ENST00000600310 DECR2Q9NUI1 292 aa16.43■□□□□ 0.22
UPF1-209ENST00000600310 FRRS1LQ9P0K9 344 aa16.43■□□□□ 0.22
UPF1-209ENST00000600310 ANKRD30BLA7E2S9 258 aa16.42■□□□□ 0.22
UPF1-209ENST00000600310 H0YL77 283 aa16.42■□□□□ 0.22
UPF1-209ENST00000600310 TPD52L2O43399 206 aaKnown RBP16.42■□□□□ 0.22
UPF1-209ENST00000600310 MTRF1O75570 445 aaKnown RBP16.42■□□□□ 0.22
UPF1-209ENST00000600310 CSF3P09919 207 aa16.42■□□□□ 0.22
UPF1-209ENST00000600310 CCL1P22362 96 aa16.42■□□□□ 0.22
UPF1-209ENST00000600310 CA6P23280 308 aa16.42■□□□□ 0.22
UPF1-209ENST00000600310 CRHBPP24387 322 aa16.42■□□□□ 0.22
UPF1-209ENST00000600310 ACKR3P25106 362 aa16.42■□□□□ 0.22
UPF1-209ENST00000600310 MAP2K3P46734 347 aa16.42■□□□□ 0.22
UPF1-209ENST00000600310 TGM4P49221 684 aa16.42■□□□□ 0.22
UPF1-209ENST00000600310 DSCR9P59020 149 aa16.42■□□□□ 0.22
UPF1-209ENST00000600310 NANOS3P60323 173 aaKnown RBP16.42■□□□□ 0.22
UPF1-209ENST00000600310 SLC35A2P78381 396 aa16.42■□□□□ 0.22
UPF1-209ENST00000600310 ALKBH1Q13686 389 aaKnown RBP16.42■□□□□ 0.22
UPF1-209ENST00000600310 RBM48Q5RL73 367 aaKnown RBP16.42■□□□□ 0.22
UPF1-209ENST00000600310 RNLSQ5VYX0 342 aa16.42■□□□□ 0.22
UPF1-209ENST00000600310 KRT74Q7RTS7 529 aa16.42■□□□□ 0.22
UPF1-209ENST00000600310 ZNF786Q8N393 782 aa16.42■□□□□ 0.22
UPF1-209ENST00000600310 ZNF525Q8N782 197 aa16.42■□□□□ 0.22
UPF1-209ENST00000600310 WFDC11Q8NEX6 87 aa16.42■□□□□ 0.22
UPF1-209ENST00000600310 RDH5Q92781 318 aa16.42■□□□□ 0.22
UPF1-209ENST00000600310 FAM71F1Q96KD3 344 aaPredicted RBP16.42■□□□□ 0.22
UPF1-209ENST00000600310 SAP30LQ9HAJ7 183 aa16.42■□□□□ 0.22
UPF1-209ENST00000600310 PAK1IP1Q9NWT1 392 aaPredicted RBP16.42■□□□□ 0.22
UPF1-209ENST00000600310 UBAP1Q9NZ09 502 aa16.42■□□□□ 0.22
UPF1-209ENST00000600310 IL19Q9UHD0 177 aa16.42■□□□□ 0.22
UPF1-209ENST00000600310 NOP16Q9Y3C1 178 aaKnown RBP16.42■□□□□ 0.22
UPF1-209ENST00000600310 TACC2O95359 2948 aa16.42■□□□□ 0.22
UPF1-209ENST00000600310 CCDC168Q8NDH2 2452 aa16.41■□□□□ 0.22
UPF1-209ENST00000600310 E9PI62 339 aa16.41■□□□□ 0.22
UPF1-209ENST00000600310 P2RY10O00398 339 aa16.41■□□□□ 0.22
UPF1-209ENST00000600310 DHRS3O75911 302 aa16.41■□□□□ 0.22
UPF1-209ENST00000600310 HLA-DPB1P04440 258 aa16.41■□□□□ 0.22
UPF1-209ENST00000600310 SPRNQ5BIV9 151 aa16.41■□□□□ 0.22
UPF1-209ENST00000600310 CLEC2AQ6UVW9 174 aa16.41■□□□□ 0.22
UPF1-209ENST00000600310 SPNS3Q6ZMD2 512 aa16.41■□□□□ 0.22
UPF1-209ENST00000600310 DOK3Q7L591 496 aa16.41■□□□□ 0.22
UPF1-209ENST00000600310 KLBQ86Z14 1044 aa16.41■□□□□ 0.22
UPF1-209ENST00000600310 FTMTQ8N4E7 242 aa16.41■□□□□ 0.22
UPF1-209ENST00000600310 ZNF485Q8NCK3 441 aa16.41■□□□□ 0.22
UPF1-209ENST00000600310 OR10AD1Q8NGE0 317 aa16.41■□□□□ 0.22
UPF1-209ENST00000600310 OR14K1Q8NGZ2 314 aa16.41■□□□□ 0.22
UPF1-209ENST00000600310 RHBDD3Q9Y3P4 386 aa16.41■□□□□ 0.22
UPF1-209ENST00000600310 A0A1B0GVI7 797 aa16.4■□□□□ 0.22
UPF1-209ENST00000600310 OR4C45A6NMZ5 311 aa16.4■□□□□ 0.22
UPF1-209ENST00000600310 GMDSO60547 372 aa16.4■□□□□ 0.22
UPF1-209ENST00000600310 CST4P01036 141 aa16.4■□□□□ 0.22
UPF1-209ENST00000600310 ISG15P05161 165 aa16.4■□□□□ 0.22
UPF1-209ENST00000600310 UBCP0CG48 685 aaKnown RBP16.4■□□□□ 0.22
UPF1-209ENST00000600310 CRYBB2P43320 205 aa16.4■□□□□ 0.22
UPF1-209ENST00000600310 PDLIM4P50479 330 aa16.4■□□□□ 0.22
UPF1-209ENST00000600310 RIPPLY1Q0D2K3 151 aa16.4■□□□□ 0.22
UPF1-209ENST00000600310 OR8G1Q15617 311 aa16.4■□□□□ 0.22
UPF1-209ENST00000600310 ODF4Q2M2E3 257 aa16.4■□□□□ 0.22
UPF1-209ENST00000600310 ZBTB37Q5TC79 503 aa16.4■□□□□ 0.22
UPF1-209ENST00000600310 SPERTQ8NA61 448 aa16.4■□□□□ 0.22
UPF1-209ENST00000600310 CCDC54Q8NEL0 328 aa16.4■□□□□ 0.22
UPF1-209ENST00000600310 SEMA6DQ8NFY4 1073 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms